Literature DB >> 23679048

Peptidoglycan at its peaks: how chromatographic analyses can reveal bacterial cell wall structure and assembly.

Samantha M Desmarais1, Miguel A De Pedro, Felipe Cava, Kerwyn Casey Huang.   

Abstract

The peptidoglycan (PG) cell wall is a unique macromolecule responsible for both shape determination and cellular integrity under osmotic stress in virtually all bacteria. A quantitative understanding of the relationships between PG architecture, morphogenesis, immune system activation and pathogenesis can provide molecular-scale insights into the function of proteins involved in cell wall synthesis and cell growth. High-performance liquid chromatography (HPLC) has played an important role in our understanding of the structural and chemical complexity of the cell wall by providing an analytical method to quantify differences in chemical composition. Here, we present a primer on the basic chemical features of wall structure that can be revealed through HPLC, along with a description of the applications of HPLC PG analyses for interpreting the effects of genetic and chemical perturbations to a variety of bacterial species in different environments. We describe the physical consequences of different PG compositions on cell shape, and review complementary experimental and computational methodologies for PG analysis. Finally, we present a partial list of future targets of development for HPLC and related techniques.
© 2013 John Wiley & Sons Ltd.

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Year:  2013        PMID: 23679048      PMCID: PMC3694805          DOI: 10.1111/mmi.12266

Source DB:  PubMed          Journal:  Mol Microbiol        ISSN: 0950-382X            Impact factor:   3.501


  113 in total

1.  The peptidoglycan of Mycobacterium abscessus is predominantly cross-linked by L,D-transpeptidases.

Authors:  Marie Lavollay; Martine Fourgeaud; Jean-Louis Herrmann; Lionel Dubost; Arul Marie; Laurent Gutmann; Michel Arthur; Jean-Luc Mainardi
Journal:  J Bacteriol       Date:  2010-11-19       Impact factor: 3.490

2.  Lipoprotein cofactors located in the outer membrane activate bacterial cell wall polymerases.

Authors:  Catherine Paradis-Bleau; Monica Markovski; Tsuyoshi Uehara; Tania J Lupoli; Suzanne Walker; Daniel E Kahne; Thomas G Bernhardt
Journal:  Cell       Date:  2010-12-23       Impact factor: 41.582

3.  Peptidoglycan architecture can specify division planes in Staphylococcus aureus.

Authors:  Robert D Turner; Emma C Ratcliffe; Richard Wheeler; Ramin Golestanian; Jamie K Hobbs; Simon J Foster
Journal:  Nat Commun       Date:  2010-06-15       Impact factor: 14.919

4.  Mechanical control of bacterial cell shape.

Authors:  Hongyuan Jiang; Fangwei Si; William Margolin; Sean X Sun
Journal:  Biophys J       Date:  2011-07-20       Impact factor: 4.033

5.  High-throughput, subpixel precision analysis of bacterial morphogenesis and intracellular spatio-temporal dynamics.

Authors:  Oleksii Sliusarenko; Jennifer Heinritz; Thierry Emonet; Christine Jacobs-Wagner
Journal:  Mol Microbiol       Date:  2011-03-17       Impact factor: 3.501

6.  Protein diffusion in the periplasm of E. coli under osmotic stress.

Authors:  Kem A Sochacki; Irina A Shkel; M Thomas Record; James C Weisshaar
Journal:  Biophys J       Date:  2011-01-05       Impact factor: 4.033

7.  Mechanisms for maintaining cell shape in rod-shaped Gram-negative bacteria.

Authors:  Leon Furchtgott; Ned S Wingreen; Kerwyn Casey Huang
Journal:  Mol Microbiol       Date:  2011-04-18       Impact factor: 3.501

8.  Teichoic acids are temporal and spatial regulators of peptidoglycan cross-linking in Staphylococcus aureus.

Authors:  Magda L Atilano; Pedro M Pereira; James Yates; Patricia Reed; Helena Veiga; Mariana G Pinho; Sérgio R Filipe
Journal:  Proc Natl Acad Sci U S A       Date:  2010-10-13       Impact factor: 11.205

Review 9.  Emerging knowledge of regulatory roles of D-amino acids in bacteria.

Authors:  Felipe Cava; Hubert Lam; Miguel A de Pedro; Matthew K Waldor
Journal:  Cell Mol Life Sci       Date:  2010-12-14       Impact factor: 9.261

10.  Regulation of peptidoglycan synthesis by outer-membrane proteins.

Authors:  Athanasios Typas; Manuel Banzhaf; Bart van den Berg van Saparoea; Jolanda Verheul; Jacob Biboy; Robert J Nichols; Matylda Zietek; Katrin Beilharz; Kai Kannenberg; Moritz von Rechenberg; Eefjan Breukink; Tanneke den Blaauwen; Carol A Gross; Waldemar Vollmer
Journal:  Cell       Date:  2010-12-23       Impact factor: 41.582

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  43 in total

1.  High-throughput, Highly Sensitive Analyses of Bacterial Morphogenesis Using Ultra Performance Liquid Chromatography.

Authors:  Samantha M Desmarais; Carolina Tropini; Amanda Miguel; Felipe Cava; Russell D Monds; Miguel A de Pedro; Kerwyn Casey Huang
Journal:  J Biol Chem       Date:  2015-10-14       Impact factor: 5.157

Review 2.  The sentinel role of peptidoglycan recycling in the β-lactam resistance of the Gram-negative Enterobacteriaceae and Pseudomonas aeruginosa.

Authors:  Jed F Fisher; Shahriar Mobashery
Journal:  Bioorg Chem       Date:  2014-06-04       Impact factor: 5.275

3.  Isolation and preparation of bacterial cell walls for compositional analysis by ultra performance liquid chromatography.

Authors:  Samantha M Desmarais; Felipe Cava; Miguel A de Pedro; Kerwyn Casey Huang
Journal:  J Vis Exp       Date:  2014-01-15       Impact factor: 1.355

4.  Diaminopimelic Acid Amidation in Corynebacteriales: NEW INSIGHTS INTO THE ROLE OF LtsA IN PEPTIDOGLYCAN MODIFICATION.

Authors:  Marjorie Levefaudes; Delphine Patin; Célia de Sousa-d'Auria; Mohamed Chami; Didier Blanot; Mireille Hervé; Michel Arthur; Christine Houssin; Dominique Mengin-Lecreulx
Journal:  J Biol Chem       Date:  2015-04-06       Impact factor: 5.157

5.  Coxiella burnetii RpoS Regulates Genes Involved in Morphological Differentiation and Intracellular Growth.

Authors:  Derek E Moormeier; Kelsi M Sandoz; Paul A Beare; Daniel E Sturdevant; Vinod Nair; Diane C Cockrell; Heather E Miller; Robert A Heinzen
Journal:  J Bacteriol       Date:  2019-03-26       Impact factor: 3.490

Review 6.  Illumination of growth, division and secretion by metabolic labeling of the bacterial cell surface.

Authors:  M Sloan Siegrist; Benjamin M Swarts; Douglas M Fox; Shion An Lim; Carolyn R Bertozzi
Journal:  FEMS Microbiol Rev       Date:  2015-01-23       Impact factor: 16.408

7.  The Chaperone Activities of DsbG and Spy Restore Peptidoglycan Biosynthesis in the elyC Mutant by Preventing Envelope Protein Aggregation.

Authors:  Imène Kouidmi; Laura Alvarez; Jean François Collet; Felipe Cava; Catherine Paradis-Bleau
Journal:  J Bacteriol       Date:  2018-09-10       Impact factor: 3.490

Review 8.  Bacterial Cell Mechanics.

Authors:  George K Auer; Douglas B Weibel
Journal:  Biochemistry       Date:  2017-07-11       Impact factor: 3.162

9.  L-arabinose induces the formation of viable non-proliferating spheroplasts in Vibrio cholerae.

Authors:  Elena Espinosa; Sandra Daniel; Sara B Hernández; Anthony Goudin; Felipe Cava; François-Xavier Barre; Elisa Galli
Journal:  Appl Environ Microbiol       Date:  2020-12-18       Impact factor: 4.792

Review 10.  Fundamental principles in bacterial physiology-history, recent progress, and the future with focus on cell size control: a review.

Authors:  Suckjoon Jun; Fangwei Si; Rami Pugatch; Matthew Scott
Journal:  Rep Prog Phys       Date:  2018-01-09
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