| Literature DB >> 23675268 |
Keshav P Pokhrel1, Dimitrios Vovoras, Chris P Tsokos.
Abstract
The examination of brain tumor growth and its variability among cancer patients is an important aspect of epidemiologic and medical data. Several studies for tumors of brain interpreted descriptive data, in this study we perform inference in the extent possible, suggesting possible explanations for the differentiation in the survival rates apparent in the epidemiologic data. Population based information from nine registries in the USA are classified with respect to age, gender, race and tumor histology to study tumor size variation. The Weibull and Dagum distributions are fitted to the highly skewed tumor sizes distributions, the parametric analysis of the tumor sizes showed significant differentiation between sexes, increased skewness for both the male and female populations, as well as decreased kurtosis for the black female population. The effect of population characteristics on the distribution of tumor sizes is estimated by quantile regression model and then compared with the ordinary least squares results. The higher quantiles of the distribution of tumor sizes for whites are significantly higher than those of other races. Our model predicted that the effect of age in the lower quantiles of the tumor sizes distribution is negative given the variables race and sex. We apply probability and regression models to explore the effects of demographic and histology types and observe significant racial and gender differences in the form of the distributions. Efforts are made to link tumor size data with available survival rates in relation to other prognostic variables.Entities:
Keywords: SEER; brain and CNS; parametric analysis; prognostic variables; quantile regression; survival rate; tumor size
Year: 2012 PMID: 23675268 PMCID: PMC3615278
Source DB: PubMed Journal: Int J Biomed Sci ISSN: 1550-9702
Figure 1The above classification scheme for brain tumors is based on the classification scheme proposed by RD Barr and colleagues. The variables were updated from the original ICD-O-2 based classification scheme using ICD-O-3 definitions for cancer morphology and topography.
Characteristics of the study population by histology type, race, sex, the numbers shown at the body of the table refer to percentages of the diagnosed population
| Histology | Age category | Race/Gender | Total | ||||
|---|---|---|---|---|---|---|---|
| 0-19 | 20-64 | 65+ | White male | Non-white male | White female | ||
|
| |||||||
| Astrocytoma | |||||||
| Specified low grade astrocytic tumor | 9.1 | 43.8 | 46.9 | 45.3 | 6.2 | 42.3 | 6558 |
| Glioblastoma and anaplastic astrocytoma | 9.6 | 47.0 | 43.3 | 46.6 | 5.6 | 42.9 | 23661 |
| Astrocytoma NOS | 9.8 | 43.6 | 46.5 | 42.8 | 9.2 | 37.9 | 8431 |
| Other Glioma | 10.0 | 43.6 | 45.8 | 45.4 | 7.2 | 40.8 | 7856 |
| Ependynoma | 5.8 | 52.1 | 42.0 | 30.9 | 9 | 43.8 | 1731 |
| Medulloblastoma and other Primitive Neuroectodermal Tumors (PNET) | |||||||
| Medulloblastoma | 69.7 | 26.7 | 3.4 | 48.8 | 3.5 | 36 | 86 |
| Supratentorial PNET | 6.5 | 45.2 | 48.2 | 50.4 | 3.2 | 43.5 | 1707 |
| Other specified intracranial and intraspinal neoplasms | 9.0 | 51.7 | 39.2 | 37.4 | 7.9 | 40.8 | 9901 |
| Unspecified intracranial and intraspinal neoplasms | |||||||
| Unspecified malignant intracranial intraspinal neoplasms | 11.7 | 52.3 | 35.9 | 50.4 | 4.2 | 41.8 | 11792 |
| Unspecified benign intracranial intraspinal neoplasm | 3.1 | 58.3 | 38.5 | 30.8 | 4.9 | 57.5 | 961 |
| Total | 9.3 | 46.3 | 43.8 | 44.8 | 6.2 | 42.5 | 72770 |
The sums of the subgroups listed donot equal the total. Tumor types included in the total may not be in a specific subgroup of SEER classification.
The identified probability distributions along with the estimates for the corresponding parameters that best fit the tumor sizes data
| Males | Females | |
|---|---|---|
|
| ||
| All races | Dagum (4p): | Weibull: |
| White | Dagum (4p): | Weibull: |
| Black | Dagum (3p): | Dagum (4p): |
| Other | Dagum (4p): | Weibull: |
Figure 2Average tumor size (the largest dimension or diameter of the primary tumor in mm) against age at diagnosis for tumors diagnosed from 1973-2006 included in the SEER 9 registries database. Average tumor sizes reported for males are shown with bold circles and a hollow circle is used for female records.
Figure 3Plots of fitted probability distribution functions (PDF) of tumor sizes classified for gender and race. The leftmost triad of curves corresponds to PDF’s for females and the rightmost triad of curves corresponds to males. The identified probability distributions along with the estimates for the corresponding parameters that best fit the tumor sizes data are shown below.
Estimates of central tendency and variability for tumor sizes classified according to race and gender were obtained using estimated parameters for the identified probability distributions shown under Figure 3
| Median/Mean | Variance | Skewness | Kurtosis | |||||
|---|---|---|---|---|---|---|---|---|
| male | female | male | female | male | female | Male | female | |
|
| ||||||||
| All races | 40.38/42.36 | 36.29/38.55 | 457.10 | 398.68 | 1.35 | 0.62 | 11.30 | 0.02 |
| White | 40.93/42.65 | 36.90/38.95 | 442.18 | 383.06 | 1.22 | 0.58 | 9.75 | 0.01 |
| Black | 40.35/44.22 | 33.06/37.84 | 692.22 | 707.71 | 2.69 | 4.87 | 68.67 | -92.03 |
| Other | 41.27/43.62 | 36.35/39.17 | 533.25 | 464.14 | 1.54 | 0.71 | 14.15 | 0.04 |
Average tumor sizes (in mm) by major histological type for primary brain tumors across three different age groups (0-19, 20-64, >65 years of age) with corresponding number of diagnosed cases in italics
| Histology | Age Groups (Males) | Age Groups (Females) | ||||
|---|---|---|---|---|---|---|
| 0-19 | 20-64 | 65+ | 0-19 | 20-64 | 65+ | |
|
| ||||||
| Astrocytoma | 43.3 5( | 43.36 ( | 42.91 ( | 42.82 (517) | 39.75 ( | 38.22 ( |
| Other Glioma | 42.27 ( | 44.37 ( | 45.17 ( | 46.42 ( | 42.67 ( | 40.69 ( |
| Ependymoma | 41.35 ( | 41.91 ( | 41.56 ( | 39.56 ( | 35.95 ( | 28.11 ( |
| Medulloblastoma | 43.86 ( | 46.13 ( | 46.02 ( | 40.70 ( | 48.72 ( | 46.04 ( |
| Other Specified | 47.33 ( | 41.56 ( | 41.00 (546) | 42.86 (1 | 35.81 ( | 34.89 (878) |
| Unspecified | 42.22 ( | 43.01 ( | 45.03 ( | 36.23 ( | 39.58 ( | 40.21 ( |
Cancer of the Brain and other CNS: Sex specific probabilities and relative survival rates for different tumor sizes
| Tumor size | Probability | Relative survival rate 5 year (%) | ||
|---|---|---|---|---|
| Male | Female | Brain | Other CNS | |
|
| ||||
| <20 mm | 0.133 | 0.18 | 31.5 | 89.2 |
| 20-50 mm | 0.555 | 0.546 | 19.8 | 71.2 |
| >50 mm | 0.311 | 0.266 | 20.8 | 58.3 |
Figure 4A summary of quantile regression estimates for the tumor sizes model involving three covariates and their interaction. For each of the coefficients we plot the 19 distinct quantile regression estimates. The shaded blue area depicts a 95% pointwise confidence band for the quantile regression estimates.
Ordinary and Quantile regression estimation of Eq. e: the coefficients on ‘tumor sizes’ reported for the 10%, 25%, 50%, 75% and 90% quantiles and the mean
| OLS | Quantile Regression | |||||
|---|---|---|---|---|---|---|
| 10 | 25 | 50 | 75 | 90 | ||
|
| ||||||
| Intercept |
|
|
|
|
|
|
| Race 1 | 0.013 | -1.801 | -1.258 | 0.347 | 0.000 | -1.615 |
| Race 2 | -0.545 | -1.758 | -1.3510 | -1.689 | 0.746 | -7.014 |
| Sex 1 | 1.356 | 2.475 | 1.816 | -0.208 |
| 0.768 |
| Age |
|
|
|
| 0.000 | 0.000 |
| Age*Sex 1 |
| 0.032 |
|
| 0.000 | 0.019 |
| Age*Race 1 | -0.003 | 0.054 | 0.045 | 0.000 | 0.000 | -0.076 |
| Age*Race 2 | -0.050 | 0.023 | -0.005 |
| 0.000 | -0.019 |
| Sex1*Race1 | -0.447 | -0.361 | 0.942 | -0.347 | -2.000 | 2.905 |
| Sex1*Race2 | 2.369 | -0.235 | 1.035 |
| -0.328 |
|
Coefficients significant at the 5% level appear in bold.
| Intercept | Race 1 | Race 2 | Sex 1 | Age | Age*Sex1 | Age*Race1 | Age*Race2 | Sex1*Race1 | Sex1*Race2 | |
|
| ||||||||||
| OLS |
| 0.013 | -0.545 | 1.356 |
|
| -0.003 | -0.050 | -0.447 | 2.369 |
| Quantile Regression | ||||||||||
|
| ||||||||||
| 5 |
|
|
|
|
| -0.000 |
|
| 0.058 | -1.941 |
| 10 |
| -1.801 | -1.758 | 2.475 |
| 0.032 | 0.054 | 0.020 | -0.360 | -0.235 |
| 15 |
| -0.489 |
| 0.783 |
|
|
| 0.033 |
| 0.640 |
| 20 |
|
| -1.765 |
|
| 0.000 |
| 0.013 | 0.600 | 1.339 |
| 25 |
| -1.258 | -1.351 | 1.816 |
|
| 0.044 | -0.004 | 0.942 | 1.034 |
| 30 |
|
| 0.084 |
|
|
| 0.006 | 0.036 |
| 1.227 |
| 35 |
| -0.608 | -0.560 | 2.874 |
|
| 0.039 | -0.037 | -1.720 | 0.767 |
| 40 |
| 0.298 | 0.876 | 4.164 | -0.044 |
| 0.000 | -0.071 | -1.298 | 0.338 |
| 45 |
| -0.093 | -1.266 | 1.156 |
|
| 0.000 | -0.038 | 0.093 | 1.574 |
| 50 |
| 0.347 | -1.689 | -0.208 |
|
| -0.000 | -0.037 | -0.347 | 3.800 |
| 55 |
| 0.000 | 0.857 | 1.686 | -0.000 | 0.019 | -0.000 |
| 0.254 | 4.069 |
| 60 |
| 0.150 | 1.032 | 2.141 | -0.035 |
| -0.006 | -0.078 | -0.409 | 1.579 |
| 65 |
| -0.341 |
|
|
|
| -0.000 | -0.001 | 0.341 |
|
| 70 |
| 0.311 | -2.169 | -0.192 |
|
| -0.012 | -0.049 | -0.261 |
|
| 75 |
| 0.000 | 0.746 |
| -0.000 | 0.000 | -0.000 | -0.029 |
| -0.328 |
| 80 |
| -2.160 | -3.224 | 0.968 | 0.053 |
| -0.014 | -0.029 | 3.085 | 4.164 |
| 85 |
| 0.968 | -2.652 | -0.187 | 0.000 |
|
|
| -0.781 |
|
| 90 |
| -1.615 | -7.014 | 0.768 | 0.000 | 0.019 | -0.076 | -0.019 | 2.905 |
|
| 95 |
| -0.071 | 3.142 |
| 0.035 | -0.035 | -0.035 | -0.107 | -3.607 | 0.928 |