Literature DB >> 23672211

General model for estimating partition coefficients to organisms and their tissues using the biological compositions and polyparameter linear free energy relationships.

Satoshi Endo1, Trevor N Brown, Kai-Uwe Goss.   

Abstract

Equilibrium partition coefficients of organic chemicals from water to an organism or its tissues are typically estimated by using the total lipid content in combination with the octanol-water partition coefficient (K(ow)). This estimation method can cause systematic errors if (1) different lipid types have different sorptive capacities, (2) nonlipid components such as proteins have a significant contribution, and/or (3) K(ow) is not a suitable descriptor. As an alternative, this study proposes a more general model that uses detailed organism and tissue compositions (i.e., contents of storage lipid, membrane lipid, albumin, other proteins, and water) and polyparameter linear free energy relationships (PP-LFERs). The values calculated by the established PP-LFER-composition-based model agree well with experimental in vitro partition coefficients and in vivo steady-state concentration ratios from the literature with a root mean squared error of 0.32-0.53 log units, without any additional fitting. This model estimates a high contribution of the protein fraction to the overall tissue sorptive capacity in lean tissues (e.g., muscle), in particular for H-bond donor polar compounds. Direct model comparison revealed that the simple lipid-octanol model still calculates many tissue-water partition coefficients within 1 log unit of those calculated by the PP-LFER-composition-based model. Thus, the lipid-octanol model can be used as an order-of-magnitude approximation, for example, for multimedia fate modeling, but may not be suitable for more accurate predictions. Storage lipid-rich phases (e.g., adipose, milk) are prone to particularly large systematic errors. The new model provides useful implications for validity of lipid-normalization of concentrations in organisms, interpretation of biomonitoring results, and assessment of toxicity.

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Year:  2013        PMID: 23672211     DOI: 10.1021/es401772m

Source DB:  PubMed          Journal:  Environ Sci Technol        ISSN: 0013-936X            Impact factor:   9.028


  9 in total

1.  Response to "comment on 'structural determinants of drug partitioning in surrogates of phosphatidylcholine bilayer strata'".

Authors:  Stefan Balaz
Journal:  Mol Pharm       Date:  2015-03-27       Impact factor: 4.939

Review 2.  Assessing the bioaccumulation potential of ionizable organic compounds: Current knowledge and research priorities.

Authors:  James M Armitage; Russell J Erickson; Till Luckenbach; Carla A Ng; Ryan S Prosser; Jon A Arnot; Kristin Schirmer; John W Nichols
Journal:  Environ Toxicol Chem       Date:  2016-12-19       Impact factor: 3.742

3.  Atropselective Partitioning of Polychlorinated Biphenyls in a HepG2 Cell Culture System: Experimental and Modeling Results.

Authors:  Chun-Yun Zhang; Susanne Flor; Gabriele Ludewig; Hans-Joachim Lehmler
Journal:  Environ Sci Technol       Date:  2020-10-15       Impact factor: 9.028

4.  Developing a Physiologically-Based Pharmacokinetic Model Knowledgebase in Support of Provisional Model Construction.

Authors:  Jingtao Lu; Michael-Rock Goldsmith; Christopher M Grulke; Daniel T Chang; Raina D Brooks; Jeremy A Leonard; Martin B Phillips; Ethan D Hypes; Matthew J Fair; Rogelio Tornero-Velez; Jeffre Johnson; Curtis C Dary; Yu-Mei Tan
Journal:  PLoS Comput Biol       Date:  2016-02-12       Impact factor: 4.475

5.  Exploring the partitioning of hydrophobic organic compounds between water, suspended particulate matter and diverse fish species in a German river ecosystem.

Authors:  Theo Wernicke; Elisa Rojo-Nieto; Albrecht Paschke; Claudia Nogueira Tavares; Mario Brauns; Annika Jahnke
Journal:  Environ Sci Eur       Date:  2022-08-05       Impact factor: 5.481

6.  Exploring the role of octanol-water partition coefficient and Henry's law constant in predicting the lipid-water partition coefficients of organic chemicals.

Authors:  Muhammad Irfan Khawar; Azhar Mahmood; Deedar Nabi
Journal:  Sci Rep       Date:  2022-09-02       Impact factor: 4.996

7.  Identifying organic chemicals not subject to bioaccumulation in air-breathing organisms using predicted partitioning and biotransformation properties.

Authors:  Frank Wania; Ying Duan Lei; Sivani Baskaran; Alessandro Sangion
Journal:  Integr Environ Assess Manag       Date:  2021-12-16       Impact factor: 3.084

8.  A hybrid modeling approach for assessing mechanistic models of small molecule partitioning in vivo using a machine learning-integrated modeling platform.

Authors:  Victor Antontsev; Aditya Jagarapu; Yogesh Bundey; Hypatia Hou; Maksim Khotimchenko; Jason Walsh; Jyotika Varshney
Journal:  Sci Rep       Date:  2021-05-27       Impact factor: 4.379

9.  Measured and modeled toxicokinetics in cultured fish cells and application to in vitro-in vivo toxicity extrapolation.

Authors:  Julita Stadnicka-Michalak; Katrin Tanneberger; Kristin Schirmer; Roman Ashauer
Journal:  PLoS One       Date:  2014-03-19       Impact factor: 3.240

  9 in total

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