Literature DB >> 23665540

Decoding human gene expression signatures in the brain.

Guang-Zhong Wang1, Genevieve Konopka.   

Abstract

The evolution of higher cognitive functions in humans is thought to be due, at least in part, to the molecular evolution of gene expression patterns specific to the human brain. In this article, we explore recent and past findings using comparative genomics in human and non-human primate brain to identify these novel human patterns. We suggest additional directions and lines of experimentation that should be taken to improve our understanding of these changes on the human lineage. Finally, we attempt to put into context these genomic changes with biological phenotypes and diseases in humans.

Entities:  

Keywords:  brain; coexpression; evolution; gene expression; genomics; nervous system

Mesh:

Substances:

Year:  2013        PMID: 23665540      PMCID: PMC4042582          DOI: 10.4161/trns.24885

Source DB:  PubMed          Journal:  Transcription        ISSN: 2154-1272


  76 in total

Review 1.  TALENs: a widely applicable technology for targeted genome editing.

Authors:  J Keith Joung; Jeffry D Sander
Journal:  Nat Rev Mol Cell Biol       Date:  2012-11-21       Impact factor: 94.444

2.  Local and long-range functional connectivity is reduced in concert in autism spectrum disorders.

Authors:  Sheraz Khan; Alexandre Gramfort; Nandita R Shetty; Manfred G Kitzbichler; Santosh Ganesan; Joseph M Moran; Su Mei Lee; John D E Gabrieli; Helen B Tager-Flusberg; Robert M Joseph; Martha R Herbert; Matti S Hämäläinen; Tal Kenet
Journal:  Proc Natl Acad Sci U S A       Date:  2013-01-14       Impact factor: 11.205

Review 3.  CRISPR-Cas systems and RNA-guided interference.

Authors:  Rodolphe Barrangou
Journal:  Wiley Interdiscip Rev RNA       Date:  2013-03-20       Impact factor: 9.957

4.  Retooling spare parts: gene duplication and cognition.

Authors:  T Grant Belgard; Daniel H Geschwind
Journal:  Nat Neurosci       Date:  2013-01       Impact factor: 24.884

Review 5.  Dysconnectivity, large-scale networks and neuronal dynamics in schizophrenia.

Authors:  Peter J Uhlhaas
Journal:  Curr Opin Neurobiol       Date:  2012-12-07       Impact factor: 6.627

6.  Functional assays of local connectivity in the somatosensory cortex of individuals with autism.

Authors:  Mehmet Akif Coskun; Katherine A Loveland; Deborah A Pearson; Andrew C Papanicolaou; Bhavin R Sheth
Journal:  Autism Res       Date:  2013-02-20       Impact factor: 5.216

7.  FOXP2 targets show evidence of positive selection in European populations.

Authors:  Qasim Ayub; Bryndis Yngvadottir; Yuan Chen; Yali Xue; Min Hu; Sonja C Vernes; Simon E Fisher; Chris Tyler-Smith
Journal:  Am J Hum Genet       Date:  2013-04-18       Impact factor: 11.025

Review 8.  Corticostriatal connectivity and its role in disease.

Authors:  Gordon M G Shepherd
Journal:  Nat Rev Neurosci       Date:  2013-04       Impact factor: 34.870

9.  A recent evolutionary change affects a regulatory element in the human FOXP2 gene.

Authors:  Tomislav Maricic; Viola Günther; Oleg Georgiev; Sabine Gehre; Marija Curlin; Christiane Schreiweis; Ronald Naumann; Hernán A Burbano; Matthias Meyer; Carles Lalueza-Fox; Marco de la Rasilla; Antonio Rosas; Srecko Gajovic; Janet Kelso; Wolfgang Enard; Walter Schaffner; Svante Pääbo
Journal:  Mol Biol Evol       Date:  2012-11-28       Impact factor: 16.240

10.  Widespread splicing changes in human brain development and aging.

Authors:  Pavel Mazin; Jieyi Xiong; Xiling Liu; Zheng Yan; Xiaoyu Zhang; Mingshuang Li; Liu He; Mehmet Somel; Yuan Yuan; Yi-Ping Phoebe Chen; Na Li; Yuhui Hu; Ning Fu; Zhibin Ning; Rong Zeng; Hongyi Yang; Wei Chen; Mikhail Gelfand; Philipp Khaitovich
Journal:  Mol Syst Biol       Date:  2013       Impact factor: 11.429

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  2 in total

1.  Correspondence between Resting-State Activity and Brain Gene Expression.

Authors:  Guang-Zhong Wang; T Grant Belgard; Deng Mao; Leslie Chen; Stefano Berto; Todd M Preuss; Hanzhang Lu; Daniel H Geschwind; Genevieve Konopka
Journal:  Neuron       Date:  2015-11-18       Impact factor: 17.173

2.  Identification of the Molecular Events Involved in the Development of Prefrontal Cortex Through the Analysis of RNA-Seq Data From BrainSpan.

Authors:  Hadi Najafi; Mohadeseh Naseri; Javad Zahiri; Mehdi Totonchi; Majid Sadeghizadeh
Journal:  ASN Neuro       Date:  2019 Jan-Dec       Impact factor: 4.146

  2 in total

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