Literature DB >> 23662816

eyeGENE®: a vision community resource facilitating patient care and paving the path for research through molecular diagnostic testing.

D Blain1, K E Goetz, R Ayyagari, S J Tumminia.   

Abstract

Molecular genetics and genomics are revolutionizing the study and treatment of inherited eye diseases. In recognition of the impact of molecular genetics on vision and ophthalmology, the National Eye Institute established the National Ophthalmic Disease Genotyping and Phenotyping Network (eyeGENE®) as a multidirectional research initiative whereby a clinical component for patients diagnosed with inherited eye disease fosters research into the causes and mechanisms of these ophthalmic diseases. This is accomplished by broadening access to genetic diagnostic testing and maintaining a repository of DNA samples from clinically characterized individuals and their families to allow investigations of the causes, interventions, and management of genetic eye disorders. The eyeGENE® Network currently includes Clinical Laboratory Improvement Amendments (CLIA)-certified diagnostic laboratory partners, over 270 registered clinical organizations with 500 registered users from around the United States and Canada, and is now testing approximately 100 genes representing 35 inherited eye diseases. To date, the Network has received 4400 samples from individuals with rare inherited eye diseases, which are available for access by the vision research community. eyeGENE® is a model partnership between the U.S. federal government, eye health care providers, CLIA-approved molecular diagnostic laboratories, private industry, and scientists who represent a broad research constituency.
© 2013 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

Entities:  

Keywords:  biorepository; clinical trials; diagnostic genotyping; eyeGENE®; genetic testing; ocular genetics; patient registry

Mesh:

Year:  2013        PMID: 23662816      PMCID: PMC3816398          DOI: 10.1111/cge.12193

Source DB:  PubMed          Journal:  Clin Genet        ISSN: 0009-9163            Impact factor:   4.438


  37 in total

1.  Human gene therapy for RPE65 isomerase deficiency activates the retinoid cycle of vision but with slow rod kinetics.

Authors:  Artur V Cideciyan; Tomas S Aleman; Sanford L Boye; Sharon B Schwartz; Shalesh Kaushal; Alejandro J Roman; Ji-Jing Pang; Alexander Sumaroka; Elizabeth A M Windsor; James M Wilson; Terence R Flotte; Gerald A Fishman; Elise Heon; Edwin M Stone; Barry J Byrne; Samuel G Jacobson; William W Hauswirth
Journal:  Proc Natl Acad Sci U S A       Date:  2008-09-22       Impact factor: 11.205

2.  Identification of disease-causing mutations in autosomal dominant retinitis pigmentosa (adRP) using next-generation DNA sequencing.

Authors:  Sara J Bowne; Lori S Sullivan; Daniel C Koboldt; Li Ding; Robert Fulton; Rachel M Abbott; Erica J Sodergren; David G Birch; Dianna H Wheaton; John R Heckenlively; Qin Liu; Eric A Pierce; George M Weinstock; Stephen P Daiger
Journal:  Invest Ophthalmol Vis Sci       Date:  2011-01-25       Impact factor: 4.799

3.  Cone photoreceptor abnormalities correlate with vision loss in patients with Stargardt disease.

Authors:  Yingming Chen; Kavitha Ratnam; Sanna M Sundquist; Brandon Lujan; Radha Ayyagari; V Harini Gudiseva; Austin Roorda; Jacque L Duncan
Journal:  Invest Ophthalmol Vis Sci       Date:  2011-05-17       Impact factor: 4.799

4.  Age-dependent effects of RPE65 gene therapy for Leber's congenital amaurosis: a phase 1 dose-escalation trial.

Authors:  Albert M Maguire; Katherine A High; Alberto Auricchio; J Fraser Wright; Eric A Pierce; Francesco Testa; Federico Mingozzi; Jeannette L Bennicelli; Gui-shuang Ying; Settimio Rossi; Ann Fulton; Kathleen A Marshall; Sandro Banfi; Daniel C Chung; Jessica I W Morgan; Bernd Hauck; Olga Zelenaia; Xiaosong Zhu; Leslie Raffini; Frauke Coppieters; Elfride De Baere; Kenneth S Shindler; Nicholas J Volpe; Enrico M Surace; Carmela Acerra; Arkady Lyubarsky; T Michael Redmond; Edwin Stone; Junwei Sun; Jennifer Wellman McDonnell; Bart P Leroy; Francesca Simonelli; Jean Bennett
Journal:  Lancet       Date:  2009-10-23       Impact factor: 79.321

5.  Vision 1 year after gene therapy for Leber's congenital amaurosis.

Authors:  Artur V Cideciyan; William W Hauswirth; Tomas S Aleman; Shalesh Kaushal; Sharon B Schwartz; Sanford L Boye; Elizabeth A M Windsor; Thomas J Conlon; Alexander Sumaroka; Alejandro J Roman; Barry J Byrne; Samuel G Jacobson
Journal:  N Engl J Med       Date:  2009-08-13       Impact factor: 91.245

6.  Human RPE65 gene therapy for Leber congenital amaurosis: persistence of early visual improvements and safety at 1 year.

Authors:  Artur V Cideciyan; William W Hauswirth; Tomas S Aleman; Shalesh Kaushal; Sharon B Schwartz; Sanford L Boye; Elizabeth A M Windsor; Thomas J Conlon; Alexander Sumaroka; Ji-Jing Pang; Alejandro J Roman; Barry J Byrne; Samuel G Jacobson
Journal:  Hum Gene Ther       Date:  2009-09       Impact factor: 5.695

7.  Treatment of leber congenital amaurosis due to RPE65 mutations by ocular subretinal injection of adeno-associated virus gene vector: short-term results of a phase I trial.

Authors:  William W Hauswirth; Tomas S Aleman; Shalesh Kaushal; Artur V Cideciyan; Sharon B Schwartz; Lili Wang; Thomas J Conlon; Sanford L Boye; Terence R Flotte; Barry J Byrne; Samuel G Jacobson
Journal:  Hum Gene Ther       Date:  2008-10       Impact factor: 5.695

8.  Allelic heterogeneity and genetic modifier loci contribute to clinical variation in males with X-linked retinitis pigmentosa due to RPGR mutations.

Authors:  Abigail T Fahim; Sara J Bowne; Lori S Sullivan; Kaylie D Webb; Jessica T Williams; Dianna K Wheaton; David G Birch; Stephen P Daiger
Journal:  PLoS One       Date:  2011-08-12       Impact factor: 3.240

9.  Gene therapy for Leber's congenital amaurosis is safe and effective through 1.5 years after vector administration.

Authors:  Francesca Simonelli; Albert M Maguire; Francesco Testa; Eric A Pierce; Federico Mingozzi; Jeannette L Bennicelli; Settimio Rossi; Kathleen Marshall; Sandro Banfi; Enrico M Surace; Junwei Sun; T Michael Redmond; Xiaosong Zhu; Kenneth S Shindler; Gui-Shuang Ying; Carmela Ziviello; Carmela Acerra; J Fraser Wright; Jennifer Wellman McDonnell; Katherine A High; Jean Bennett; Alberto Auricchio
Journal:  Mol Ther       Date:  2009-12-01       Impact factor: 11.454

10.  Human TUBB3 mutations perturb microtubule dynamics, kinesin interactions, and axon guidance.

Authors:  Max A Tischfield; Hagit N Baris; Chen Wu; Guenther Rudolph; Lionel Van Maldergem; Wei He; Wai-Man Chan; Caroline Andrews; Joseph L Demer; Richard L Robertson; David A Mackey; Jonathan B Ruddle; Thomas D Bird; Irene Gottlob; Christina Pieh; Elias I Traboulsi; Scott L Pomeroy; David G Hunter; Janet S Soul; Anna Newlin; Louise J Sabol; Edward J Doherty; Clara E de Uzcátegui; Nicolas de Uzcátegui; Mary Louise Z Collins; Emin C Sener; Bettina Wabbels; Heide Hellebrand; Thomas Meitinger; Teresa de Berardinis; Adriano Magli; Costantino Schiavi; Marco Pastore-Trossello; Feray Koc; Agnes M Wong; Alex V Levin; Michael T Geraghty; Maria Descartes; Maree Flaherty; Robyn V Jamieson; H U Møller; Ingo Meuthen; David F Callen; Janet Kerwin; Susan Lindsay; Alfons Meindl; Mohan L Gupta; David Pellman; Elizabeth C Engle
Journal:  Cell       Date:  2010-01-08       Impact factor: 41.582

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  12 in total

Review 1.  Vision from next generation sequencing: multi-dimensional genome-wide analysis for producing gene regulatory networks underlying retinal development, aging and disease.

Authors:  Hyun-Jin Yang; Rinki Ratnapriya; Tiziana Cogliati; Jung-Woong Kim; Anand Swaroop
Journal:  Prog Retin Eye Res       Date:  2015-02-07       Impact factor: 21.198

2.  Molecular diagnostic testing by eyeGENE: analysis of patients with hereditary retinal dystrophy phenotypes involving central vision loss.

Authors:  Akhila Alapati; Kerry Goetz; John Suk; Mili Navani; Amani Al-Tarouti; Thiran Jayasundera; Santa J Tumminia; Pauline Lee; Radha Ayyagari
Journal:  Invest Ophthalmol Vis Sci       Date:  2014-07-31       Impact factor: 4.799

3.  Mutations in human IFT140 cause non-syndromic retinal degeneration.

Authors:  Mingchu Xu; Lizhu Yang; Feng Wang; Huajin Li; Xia Wang; Weichen Wang; Zhongqi Ge; Keqing Wang; Li Zhao; Hui Li; Yumei Li; Ruifang Sui; Rui Chen
Journal:  Hum Genet       Date:  2015-07-28       Impact factor: 4.132

Review 4.  Immunology of AAV-Mediated Gene Transfer in the Eye.

Authors:  Keirnan Willett; Jean Bennett
Journal:  Front Immunol       Date:  2013-08-30       Impact factor: 7.561

Review 5.  Genetic architecture of retinal and macular degenerative diseases: the promise and challenges of next-generation sequencing.

Authors:  Rinki Ratnapriya; Anand Swaroop
Journal:  Genome Med       Date:  2013-10-11       Impact factor: 11.117

6.  Impact of biobanks on research outcomes in rare diseases: a systematic review.

Authors:  Monique Garcia; Jenny Downs; Alyce Russell; Wei Wang
Journal:  Orphanet J Rare Dis       Date:  2018-11-12       Impact factor: 4.123

7.  Cone Structure Persists Beyond Margins of Short-Wavelength Autofluorescence in Choroideremia.

Authors:  Katharina G Foote; Nicholas Rinella; Janette Tang; Nicolas Bensaid; Hao Zhou; Qinqin Zhang; Ruikang K Wang; Travis C Porco; Austin Roorda; Jacque L Duncan
Journal:  Invest Ophthalmol Vis Sci       Date:  2019-11-01       Impact factor: 4.799

8.  Genetic testing for inherited eye conditions in over 6,000 individuals through the eyeGENE network.

Authors:  Kerry E Goetz; Melissa J Reeves; Shaina Gagadam; Delphine Blain; Chelsea Bender; Cara Lwin; Amelia Naik; Santa J Tumminia; Robert B Hufnagel
Journal:  Am J Med Genet C Semin Med Genet       Date:  2020-09-07       Impact factor: 3.359

9.  Genotype-phenotype associations in a large PRPH2-related retinopathy cohort.

Authors:  Melissa J Reeves; Kerry E Goetz; Bin Guan; Ehsan Ullah; Delphine Blain; Wadih M Zein; Santa J Tumminia; Robert B Hufnagel
Journal:  Hum Mutat       Date:  2020-07-05       Impact factor: 4.700

10.  NGS-based Molecular diagnosis of 105 eyeGENE(®) probands with Retinitis Pigmentosa.

Authors:  Zhongqi Ge; Kristen Bowles; Kerry Goetz; Hendrik P N Scholl; Feng Wang; Xinjing Wang; Shan Xu; Keqing Wang; Hui Wang; Rui Chen
Journal:  Sci Rep       Date:  2015-12-15       Impact factor: 4.379

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