Literature DB >> 23654304

Molecular mechanisms of RNA interference.

Ross C Wilson1, Jennifer A Doudna.   

Abstract

Small RNA molecules regulate eukaryotic gene expression during development and in response to stresses including viral infection. Specialized ribonucleases and RNA-binding proteins govern the production and action of small regulatory RNAs. After initial processing in the nucleus by Drosha, precursor microRNAs (pre-miRNAs) are transported to the cytoplasm, where Dicer cleavage generates mature microRNAs (miRNAs) and short interfering RNAs (siRNAs). These double-stranded products assemble with Argonaute proteins such that one strand is preferentially selected and used to guide sequence-specific silencing of complementary target mRNAs by endonucleolytic cleavage or translational repression. Molecular structures of Dicer and Argonaute proteins, and of RNA-bound complexes, have offered exciting insights into the mechanisms operating at the heart of RNA-silencing pathways.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 23654304      PMCID: PMC5895182          DOI: 10.1146/annurev-biophys-083012-130404

Source DB:  PubMed          Journal:  Annu Rev Biophys        ISSN: 1936-122X            Impact factor:   12.981


  96 in total

Review 1.  New and old roles of the double-stranded RNA-binding domain.

Authors:  Michael Doyle; Michael F Jantsch
Journal:  J Struct Biol       Date:  2002 Oct-Dec       Impact factor: 2.867

2.  Structural basis for 5'-nucleotide base-specific recognition of guide RNA by human AGO2.

Authors:  Filipp Frank; Nahum Sonenberg; Bhushan Nagar
Journal:  Nature       Date:  2010-05-26       Impact factor: 49.962

Review 3.  How do microRNAs regulate gene expression?

Authors:  Richard J Jackson; Nancy Standart
Journal:  Sci STKE       Date:  2007-01-02

4.  Structural basis for double-stranded RNA processing by Dicer.

Authors:  Ian J Macrae; Kaihong Zhou; Fei Li; Adrian Repic; Angela N Brooks; W Zacheus Cande; Paul D Adams; Jennifer A Doudna
Journal:  Science       Date:  2006-01-13       Impact factor: 47.728

5.  Recognition of the pre-miRNA structure by Drosophila Dicer-1.

Authors:  Akihisa Tsutsumi; Tomoko Kawamata; Natsuko Izumi; Hervé Seitz; Yukihide Tomari
Journal:  Nat Struct Mol Biol       Date:  2011-09-18       Impact factor: 15.369

6.  Phosphate and R2D2 restrict the substrate specificity of Dicer-2, an ATP-driven ribonuclease.

Authors:  Elif Sarinay Cenik; Ryuya Fukunaga; Gang Lu; Robert Dutcher; Yeming Wang; Traci M Tanaka Hall; Phillip D Zamore
Journal:  Mol Cell       Date:  2011-03-17       Impact factor: 17.970

7.  Mammalian microRNAs predominantly act to decrease target mRNA levels.

Authors:  Huili Guo; Nicholas T Ingolia; Jonathan S Weissman; David P Bartel
Journal:  Nature       Date:  2010-08-12       Impact factor: 49.962

8.  The Arabidopsis thaliana double-stranded RNA binding protein DRB1 directs guide strand selection from microRNA duplexes.

Authors:  Andrew L Eamens; Neil A Smith; Shaun J Curtin; Ming-Bo Wang; Peter M Waterhouse
Journal:  RNA       Date:  2009-10-27       Impact factor: 4.942

9.  Crystal structure of human DGCR8 core.

Authors:  Sun Young Sohn; Won Jin Bae; Jeong Joo Kim; Kyu-Hyeon Yeom; V Narry Kim; Yunje Cho
Journal:  Nat Struct Mol Biol       Date:  2007-08-19       Impact factor: 15.369

10.  Structure of yeast Argonaute with guide RNA.

Authors:  Kotaro Nakanishi; David E Weinberg; David P Bartel; Dinshaw J Patel
Journal:  Nature       Date:  2012-06-20       Impact factor: 49.962

View more
  328 in total

1.  One-pot Synthesis of Functional Poly(amino ester sulfide)s and Utility in Delivering pDNA and siRNA.

Authors:  Yunfeng Yan; Lian Xue; Jason B Miller; Kejin Zhou; Petra Kos; Sussana Elkassih; Li Liu; Atsushi Nagai; Hu Xiong; Daniel J Siegwart
Journal:  Polymer (Guildf)       Date:  2015-08-18       Impact factor: 4.430

Review 2.  Noncoding RNAs and pancreatic cancer.

Authors:  Juan-Fei Peng; Yan-Yan Zhuang; Feng-Ting Huang; Shi-Neng Zhang
Journal:  World J Gastroenterol       Date:  2016-01-14       Impact factor: 5.742

3.  High Expression of miR-532-5p, a Tumor Suppressor, Leads to Better Prognosis in Ovarian Cancer Both In Vivo and In Vitro.

Authors:  Fan Wang; Jeremy T-H Chang; Chester Jingshiu Kao; R Stephanie Huang
Journal:  Mol Cancer Ther       Date:  2016-02-12       Impact factor: 6.261

4.  Antiviral Defense Mechanisms in Honey Bees.

Authors:  Laura M Brutscher; Katie F Daughenbaugh; Michelle L Flenniken
Journal:  Curr Opin Insect Sci       Date:  2015-08-01       Impact factor: 5.186

5.  Overexpression and purification of Dicer and accessory proteins for biochemical and structural studies.

Authors:  Niladri K Sinha; Brenda L Bass
Journal:  Methods       Date:  2017-07-16       Impact factor: 3.608

6.  Argonaute-bound small RNAs from promoter-proximal RNA polymerase II.

Authors:  Jesse R Zamudio; Timothy J Kelly; Phillip A Sharp
Journal:  Cell       Date:  2014-02-27       Impact factor: 41.582

7.  Estradiol activates epithelial sodium channels in rat alveolar cells through the G protein-coupled estrogen receptor.

Authors:  Megan M Greenlee; Jeremiah D Mitzelfelt; Ling Yu; Qiang Yue; Billie Jeanne Duke; Constance S Harrell; Gretchen N Neigh; Douglas C Eaton
Journal:  Am J Physiol Lung Cell Mol Physiol       Date:  2013-10-04       Impact factor: 5.464

8.  miRNA: A Novel Link Between Rice Ragged Stunt Virus and Oryza sativa.

Authors:  Yingying Zhang; Xiong Chen; Fang Yang; Lei Zhang; Wanhong Liu
Journal:  Indian J Microbiol       Date:  2016-03-04       Impact factor: 2.461

9.  Enhanced Anti-Tumor Efficacy of Lipid-Modified Platinum Derivatives in Combination with Survivin Silencing siRNA in Resistant Non-Small Cell Lung Cancer.

Authors:  George Mattheolabakis; Dandan Ling; Gulzar Ahmad; Mansoor Amiji
Journal:  Pharm Res       Date:  2016-08-15       Impact factor: 4.200

10.  MiR-135b is a direct PAX6 target and specifies human neuroectoderm by inhibiting TGF-β/BMP signaling.

Authors:  Akshay Bhinge; Jeremie Poschmann; Seema C Namboori; Xianfeng Tian; Sharon Jia Hui Loh; Anna Traczyk; Shyam Prabhakar; Lawrence W Stanton
Journal:  EMBO J       Date:  2014-05-06       Impact factor: 11.598

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.