Literature DB >> 23654302

Common folds and transport mechanisms of secondary active transporters.

Yigong Shi1.   

Abstract

Secondary active transporters exploit the electrochemical potential of solutes to shuttle specific substrate molecules across biological membranes, usually against their concentration gradient. Transporters of different functional families with little sequence similarity have repeatedly been found to exhibit similar folds, exemplified by the MFS, LeuT, and NhaA folds. Observations of multiple conformational states of the same transporter, represented by the LeuT superfamily members Mhp1, AdiC, vSGLT, and LeuT, led to proposals that structural changes are associated with substrate binding and transport. Despite recent biochemical and structural advances, our understanding of substrate recognition and energy coupling is rather preliminary. This review focuses on the common folds and shared transport mechanisms of secondary active transporters. Available structural information generally supports the alternating access model for substrate transport, with variations and extensions made by emerging structural, biochemical, and computational evidence.

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Year:  2013        PMID: 23654302     DOI: 10.1146/annurev-biophys-083012-130429

Source DB:  PubMed          Journal:  Annu Rev Biophys        ISSN: 1936-122X            Impact factor:   12.981


  113 in total

1.  NhaA antiporter functions using 10 helices, and an additional 2 contribute to assembly/stability.

Authors:  Etana Padan; Tsafi Danieli; Yael Keren; Dudu Alkoby; Gal Masrati; Turkan Haliloglu; Nir Ben-Tal; Abraham Rimon
Journal:  Proc Natl Acad Sci U S A       Date:  2015-09-28       Impact factor: 11.205

Review 2.  Energy coupling mechanisms of MFS transporters.

Authors:  Xuejun C Zhang; Yan Zhao; Jie Heng; Daohua Jiang
Journal:  Protein Sci       Date:  2015-09-18       Impact factor: 6.725

3.  Structural insights into substrate recognition in proton-dependent oligopeptide transporters.

Authors:  Fatma Guettou; Esben M Quistgaard; Lionel Trésaugues; Per Moberg; Caroline Jegerschöld; Lin Zhu; Agnes Jin Oi Jong; Pär Nordlund; Christian Löw
Journal:  EMBO Rep       Date:  2013-07-19       Impact factor: 8.807

4.  Increasing Avermectin Production in Streptomyces avermitilis by Manipulating the Expression of a Novel TetR-Family Regulator and Its Target Gene Product.

Authors:  Wenshuai Liu; Qinling Zhang; Jia Guo; Zhi Chen; Jilun Li; Ying Wen
Journal:  Appl Environ Microbiol       Date:  2015-05-22       Impact factor: 4.792

5.  An artificial molecular pump.

Authors:  Chuyang Cheng; Paul R McGonigal; Severin T Schneebeli; Hao Li; Nicolaas A Vermeulen; Chenfeng Ke; J Fraser Stoddart
Journal:  Nat Nanotechnol       Date:  2015-05-18       Impact factor: 39.213

Review 6.  Structure and gating of CLC channels and exchangers.

Authors:  Alessio Accardi
Journal:  J Physiol       Date:  2015-07-28       Impact factor: 5.182

7.  Multiscale Simulations of Biological Membranes: The Challenge To Understand Biological Phenomena in a Living Substance.

Authors:  Giray Enkavi; Matti Javanainen; Waldemar Kulig; Tomasz Róg; Ilpo Vattulainen
Journal:  Chem Rev       Date:  2019-03-12       Impact factor: 60.622

8.  Structure of the SLC4 transporter Bor1p in an inward-facing conformation.

Authors:  Nicolas Coudray; Sean L Seyler; Ralph Lasala; Zhening Zhang; Kathy M Clark; Mark E Dumont; Alexis Rohou; Oliver Beckstein; David L Stokes
Journal:  Protein Sci       Date:  2016-10-21       Impact factor: 6.725

9.  Structural basis for substrate binding and specificity of a sodium-alanine symporter AgcS.

Authors:  Jinming Ma; Hsiang-Ting Lei; Francis E Reyes; Silvia Sanchez-Martinez; Maen F Sarhan; Johan Hattne; Tamir Gonen
Journal:  Proc Natl Acad Sci U S A       Date:  2019-01-18       Impact factor: 11.205

Review 10.  GLUT, SGLT, and SWEET: Structural and mechanistic investigations of the glucose transporters.

Authors:  Dong Deng; Nieng Yan
Journal:  Protein Sci       Date:  2016-01-04       Impact factor: 6.725

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