| Literature DB >> 23653209 |
Young Chun1, N Jiten Singh, In-Chul Hwang, Jung Woo Lee, Seong Uk Yu, Kwang S Kim.
Abstract
Macrocycles based on neutral calixarenes andEntities:
Year: 2013 PMID: 23653209 PMCID: PMC3644089 DOI: 10.1038/ncomms2758
Source DB: PubMed Journal: Nat Commun ISSN: 2041-1723 Impact factor: 14.919
Figure 1Synthesis of I and II.
An efficient one-pot synthesis generates a new type of positively charged imidazolium-based calix[n]imidazolium compounds.
Figure 2X-ray crystal structures of I·4Cl·X·H5O2 (X=Cl/Br).
(a) The unit cell structure of (I4+·4Cl−·X)−·(H5O2)+ viewed along the c-axis. Planes (220) and (040) are represented in shaded boxes. (b) Packing structure of I·4Cl·X·H5O2 on the plane (220). (c) Packing structure of I·4Cl·X·H5O2 on the plane (040). (d) Structure of (H5O2)+·4Cl−. Dashed lines indicate H-bonds like ionic Cl−···H2O. (e) Structure of [I·4Cl·X]− showing different types of interactions. a=2.680, 2.731, 2.858 Å, b=2.805, 3.136 Å, c=2.686 Å, d=3.367 Å. (f) The perspective structure of arrays of [I·4Cl·X]−. In (b–f), the (C-H)+···X− ionic H-bonds are in thick dashed red lines; π+···Cl− interactions in thick dashed blue lines; CH···Cl− H-bonds in thin dotted red lines. In (a), only the (C-H)+···X− and O-H···Cl−, H-bonds are drawn in red color for visual clarity. As the Cl/Br is alternatively occupied, the corresponding O in H5O2 is positioned slightly differently, and so the O position is not given at a single point, but at four different points (O1a, O1b, O1a’, O1b’ in d) close to each other; otherwise, a supercell needs to be used.
Figure 3X-ray crystal structures of II·5Br·[F·H5O2].
(a) The unit cell structure viewed along the a-axis. A unit cell is denoted by a red box. (b). Side and top views of the structure of II·5Br·[F·H5O2] showing the (C-H)+···Br− ionic H-bonds in thick dashed and dotted red line for Br1-H2, in green line for Br1-H6, and in violet line for Br1-H10, where the interactions are shown in thick dashed lines from the bromide anion to the centroid of an imidazole moiety.
Figure 4Isothermal titration calorimetry (ITC) data of 0.5 mM I·4Cl·X·H5O2 (=I·4Cl·X ) in H2O with 10 mM tetrabutylammonium fluoride (TBA-F).
Left: ITC ΔH of 10 μl injection of 10 mM TBA-F into 0.5 mM I·4Cl·X·H5O2 in water, experimental data (▪) and control data (○). Right: ITC thermogram of TBA-F into I·4Cl·X·H5O2.
Figure 5B3LYP self consistent reaction field (SCRF) polarizable continuum model (PCM) optimized geometries of the cone-conformers of I·4Cl-c/t, [I·5Cl]−-t, [I·4Cl·F]−-t, 2[I·5Cl]−-ct and 2[I·5Cl]−-tc.
The (C-H)+···Cl− ionic H-bonds and CH···F−/Cl− H-bonds are denoted by red dotted lines (distance ~2.7 Å or less); π+-anion interactions between Cl− and positively charged imidazolium rings are in gray dotted lines. In aqueous solvent, (H5O2)+ would not be present, so the water surrounding [I·5Cl]− was taken into account with SCRF PCM calculations.
Figure 6The most stable geometry of the complex composed of the neutral C60 fullerene and II·5Br.
Calculations were carried out with resolution identity-DFT.