Literature DB >> 23652627

Modeling of brain metabolism and pyruvate compartmentation using (13)C NMR in vivo: caution required.

F Mark Jeffrey1, Isaac Marin-Valencia, Levi B Good, Alexander A Shestov, Pierre-Gilles Henry, Juan M Pascual, Craig R Malloy.   

Abstract

Two variants of a widely used two-compartment model were prepared for fitting the time course of [1,6-(13)C2]glucose metabolism in rat brain. Features common to most models were included, but in one model the enrichment of the substrates entering the glia and neuronal citric acid cycles was allowed to differ. Furthermore, the models included the capacity to analyze multiplets arising from (13)C spin-spin coupling, known to improve parameter estimates in heart. Data analyzed were from a literature report providing time courses of [1,6-(13)C2]glucose metabolism. Four analyses were used, two comparing the effect of different pyruvate enrichment in glia and neurons, and two for determining the effect of multiplets present in the data. When fit independently, the enrichment in glial pyruvate was less than in neurons. In the absence of multiplets, fit quality and parameter values were typical of those in the literature, whereas the multiplet curves were not modeled well. This prompted the use of robust statistical analysis (the Kolmogorov-Smirnov test of goodness of fit) to determine whether individual curves were modeled appropriately. At least 50% of the curves in each experiment were considered poorly fit. It was concluded that the model does not include all metabolic features required to analyze the data.

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Year:  2013        PMID: 23652627      PMCID: PMC3734769          DOI: 10.1038/jcbfm.2013.67

Source DB:  PubMed          Journal:  J Cereb Blood Flow Metab        ISSN: 0271-678X            Impact factor:   6.200


  34 in total

1.  Food for thought: challenging the dogmas.

Authors:  Luc Pellerin; Pierre J Magistretti
Journal:  J Cereb Blood Flow Metab       Date:  2003-11       Impact factor: 6.200

2.  Toward dynamic isotopomer analysis in the rat brain in vivo: automatic quantitation of 13C NMR spectra using LCModel.

Authors:  Pierre-Gilles Henry; Gülin Oz; Stephen Provencher; Rolf Gruetter
Journal:  NMR Biomed       Date:  2003 Oct-Nov       Impact factor: 4.044

3.  Altered brain mitochondrial metabolism in healthy aging as assessed by in vivo magnetic resonance spectroscopy.

Authors:  Fawzi Boumezbeur; Graeme F Mason; Robin A de Graaf; Kevin L Behar; Gary W Cline; Gerald I Shulman; Douglas L Rothman; Kitt F Petersen
Journal:  J Cereb Blood Flow Metab       Date:  2009-09-30       Impact factor: 6.200

4.  Stoichiometric coupling of brain glucose metabolism and glutamatergic neuronal activity.

Authors:  N R Sibson; A Dhankhar; G F Mason; D L Rothman; K L Behar; R G Shulman
Journal:  Proc Natl Acad Sci U S A       Date:  1998-01-06       Impact factor: 11.205

5.  Different metabolism of glutamatergic and GABAergic compartments in superfused hippocampal slices characterized by nuclear magnetic resonance spectroscopy.

Authors:  J M N Duarte; R A Cunha; R A Carvalho
Journal:  Neuroscience       Date:  2006-12-29       Impact factor: 3.590

6.  Determination of oxidative glucose metabolism in vivo in the young rat brain using localized direct-detected ¹³C NMR spectroscopy.

Authors:  Kathleen Ennis; Dinesh Kumar Deelchand; Ivan Tkac; Pierre-Gilles Henry; Raghavendra Rao
Journal:  Neurochem Res       Date:  2011-06-10       Impact factor: 3.996

7.  In vivo 13C NMR measurements of cerebral glutamine synthesis as evidence for glutamate-glutamine cycling.

Authors:  N R Sibson; A Dhankhar; G F Mason; K L Behar; D L Rothman; R G Shulman
Journal:  Proc Natl Acad Sci U S A       Date:  1997-03-18       Impact factor: 11.205

Review 8.  Energy substrates for neurons during neural activity: a critical review of the astrocyte-neuron lactate shuttle hypothesis.

Authors:  Ching-Ping Chih; Eugene L Roberts
Journal:  J Cereb Blood Flow Metab       Date:  2003-11       Impact factor: 6.200

9.  The contribution of blood lactate to brain energy metabolism in humans measured by dynamic 13C nuclear magnetic resonance spectroscopy.

Authors:  Fawzi Boumezbeur; Kitt F Petersen; Gary W Cline; Graeme F Mason; Kevin L Behar; Gerald I Shulman; Douglas L Rothman
Journal:  J Neurosci       Date:  2010-10-20       Impact factor: 6.167

10.  Compartmentalized Cerebral Metabolism of [1,6-(13)C]Glucose Determined by in vivo (13)C NMR Spectroscopy at 14.1 T.

Authors:  João M N Duarte; Bernard Lanz; Rolf Gruetter
Journal:  Front Neuroenergetics       Date:  2011-06-06
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  15 in total

1.  Diabetes: Does lactate sustain brain metabolism during hypoglycaemia?

Authors:  Elizabeth R Seaquist; Gülin Öz
Journal:  Nat Rev Endocrinol       Date:  2013-05-28       Impact factor: 43.330

2.  Decreased carbon shunting from glucose toward oxidative metabolism in diet-induced ketotic rat brain.

Authors:  Yifan Zhang; Shenghui Zhang; Isaac Marin-Valencia; Michelle A Puchowicz
Journal:  J Neurochem       Date:  2014-11-10       Impact factor: 5.372

3.  Triheptanoin for glucose transporter type I deficiency (G1D): modulation of human ictogenesis, cerebral metabolic rate, and cognitive indices by a food supplement.

Authors:  Juan M Pascual; Peiying Liu; Deng Mao; Dorothy I Kelly; Ana Hernandez; Min Sheng; Levi B Good; Qian Ma; Isaac Marin-Valencia; Xuchen Zhang; Jason Y Park; Linda S Hynan; Peter Stavinoha; Charles R Roe; Hanzhang Lu
Journal:  JAMA Neurol       Date:  2014-10       Impact factor: 18.302

4.  The ratio of acetate-to-glucose oxidation in astrocytes from a single 13C NMR spectrum of cerebral cortex.

Authors:  Isaac Marin-Valencia; M Ali Hooshyar; Kumar Pichumani; A Dean Sherry; Craig R Malloy
Journal:  J Neurochem       Date:  2014-10-14       Impact factor: 5.372

5.  In vivo 13C MRS in the mouse brain at 14.1 Tesla and metabolic flux quantification under infusion of [1,6-13C2]glucose.

Authors:  Marta Lai; Bernard Lanz; Carole Poitry-Yamate; Jackeline F Romero; Corina M Berset; Cristina Cudalbu; Rolf Gruetter
Journal:  J Cereb Blood Flow Metab       Date:  2017-10-19       Impact factor: 6.200

6.  Oxidation of [U-13 C]glucose in the human brain at 7T under steady state conditions.

Authors:  Sergey Cheshkov; Ivan E Dimitrov; Vikram Jakkamsetti; Levi Good; Dorothy Kelly; Karthik Rajasekaran; Ralph J DeBerardinis; Juan M Pascual; A Dean Sherry; Craig R Malloy
Journal:  Magn Reson Med       Date:  2017-01-23       Impact factor: 4.668

7.  INCA 2.0: A tool for integrated, dynamic modeling of NMR- and MS-based isotopomer measurements and rigorous metabolic flux analysis.

Authors:  Mohsin Rahim; Mukundan Ragavan; Stanislaw Deja; Matthew E Merritt; Shawn C Burgess; Jamey D Young
Journal:  Metab Eng       Date:  2021-12-26       Impact factor: 9.783

Review 8.  Glucose Transporter Type I Deficiency (G1D) at 25 (1990-2015): Presumptions, Facts, and the Lives of Persons With This Rare Disease.

Authors:  Juan M Pascual; Gabriel M Ronen
Journal:  Pediatr Neurol       Date:  2015-08-10       Impact factor: 3.372

Review 9.  Metabolic Modeling of Dynamic (13)C NMR Isotopomer Data in the Brain In Vivo: Fast Screening of Metabolic Models Using Automated Generation of Differential Equations.

Authors:  Brice Tiret; Alexander A Shestov; Julien Valette; Pierre-Gilles Henry
Journal:  Neurochem Res       Date:  2015-11-09       Impact factor: 3.996

10.  Rates of pyruvate carboxylase, glutamate and GABA neurotransmitter cycling, and glucose oxidation in multiple brain regions of the awake rat using a combination of [2-13C]/[1-13C]glucose infusion and 1H-[13C]NMR ex vivo.

Authors:  Laura M McNair; Graeme F Mason; Golam Mi Chowdhury; Lihong Jiang; Xiaoxian Ma; Douglas L Rothman; Helle S Waagepetersen; Kevin L Behar
Journal:  J Cereb Blood Flow Metab       Date:  2022-01-20       Impact factor: 6.960

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