Literature DB >> 23651594

The Escherichia coli Nucleoid in Stationary Phase.

Anne S Meyer1, David C Grainger.   

Abstract

Compaction of DNA is an essential phenomenon that affects all facets of cellular biology. Surprisingly, given the abundance and apparent simplicity of bacteria, our understanding of chromosome organization in these ancient organisms is inadequate. In this chapter we will focus on arguably the best understood aspect of DNA folding in the model bacterium Escherichia coli: the supercondensation of the chromosome that occurs during periods of starvation and stress.
Copyright © 2013 Elsevier Inc. All rights reserved.

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Year:  2013        PMID: 23651594     DOI: 10.1016/B978-0-12-407678-5.00002-7

Source DB:  PubMed          Journal:  Adv Appl Microbiol        ISSN: 0065-2164            Impact factor:   5.086


  14 in total

1.  Hysteresis in DNA compaction by Dps is described by an Ising model.

Authors:  Natalia N Vtyurina; David Dulin; Margreet W Docter; Anne S Meyer; Nynke H Dekker; Elio A Abbondanzieri
Journal:  Proc Natl Acad Sci U S A       Date:  2016-04-18       Impact factor: 11.205

2.  Global DNA Compaction in Stationary-Phase Bacteria Does Not Affect Transcription.

Authors:  Richard Janissen; Mathia M A Arens; Natalia N Vtyurina; Zaïda Rivai; Nicholas D Sunday; Behrouz Eslami-Mossallam; Alexey A Gritsenko; Liedewij Laan; Dick de Ridder; Irina Artsimovitch; Nynke H Dekker; Elio A Abbondanzieri; Anne S Meyer
Journal:  Cell       Date:  2018-07-26       Impact factor: 41.582

3.  DNA recognition by Escherichia coli CbpA protein requires a conserved arginine-minor-groove interaction.

Authors:  Kiran Chintakayala; Laura E Sellars; Shivani S Singh; Rajesh Shahapure; Ilja Westerlaken; Anne S Meyer; Remus T Dame; David C Grainger
Journal:  Nucleic Acids Res       Date:  2015-02-10       Impact factor: 16.971

4.  The dormancy-specific regulator, SutA, is intrinsically disordered and modulates transcription initiation in Pseudomonas aeruginosa.

Authors:  Megan Bergkessel; Brett M Babin; David VanderVelde; Michael J Sweredoski; Annie Moradian; Roxana Eggleston-Rangel; Sonja Hess; David A Tirrell; Irina Artsimovitch; Dianne K Newman
Journal:  Mol Microbiol       Date:  2019-07-10       Impact factor: 3.501

Review 5.  Dps Is a Universally Conserved Dual-Action DNA-Binding and Ferritin Protein.

Authors:  Katie Orban; Steven E Finkel
Journal:  J Bacteriol       Date:  2022-04-05       Impact factor: 3.476

6.  The DNA-Binding Protein from Starved Cells (Dps) Utilizes Dual Functions To Defend Cells against Multiple Stresses.

Authors:  Vlad O Karas; Ilja Westerlaken; Anne S Meyer
Journal:  J Bacteriol       Date:  2015-07-27       Impact factor: 3.490

7.  Single-Cell Analysis of the Dps Response to Oxidative Stress.

Authors:  Michela De Martino; Dmitry Ershov; Peter J van den Berg; Sander J Tans; Anne S Meyer
Journal:  J Bacteriol       Date:  2016-05-13       Impact factor: 3.490

8.  Network Rewiring: Physiological Consequences of Reciprocally Exchanging the Physical Locations and Growth-Phase-Dependent Expression Patterns of the Salmonella fis and dps Genes.

Authors:  Marina M Bogue; Aalap Mogre; Michael C Beckett; Nicholas R Thomson; Charles J Dorman
Journal:  mBio       Date:  2020-09-08       Impact factor: 7.867

9.  Structural Rearrangement of Dps-DNA Complex Caused by Divalent Mg and Fe Cations.

Authors:  Liubov Dadinova; Roman Kamyshinsky; Yury Chesnokov; Andrey Mozhaev; Vladimir Matveev; Andrey Gruzinov; Alexander Vasiliev; Eleonora Shtykova
Journal:  Int J Mol Sci       Date:  2021-06-03       Impact factor: 5.923

10.  A conserved mechanism drives partition complex assembly on bacterial chromosomes and plasmids.

Authors:  Roxanne E Debaugny; Aurore Sanchez; Jérôme Rech; Delphine Labourdette; Jérôme Dorignac; Frédéric Geniet; John Palmeri; Andrea Parmeggiani; François Boudsocq; Véronique Anton Leberre; Jean-Charles Walter; Jean-Yves Bouet
Journal:  Mol Syst Biol       Date:  2018-11-16       Impact factor: 11.429

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