Literature DB >> 23647220

Epilepsy informatics and an ontology-driven infrastructure for large database research and patient care in epilepsy.

Satya S Sahoo1, Guo-Qiang Zhang, Samden D Lhatoo.   

Abstract

The epilepsy community increasingly recognizes the need for a modern classification system that can also be easily integrated with effective informatics tools. The 2010 reports by the United States President's Council of Advisors on Science and Technology (PCAST) identified informatics as a critical resource to improve quality of patient care, drive clinical research, and reduce the cost of health services. An effective informatics infrastructure for epilepsy, which is underpinned by a formal knowledge model or ontology, can leverage an ever increasing amount of multimodal data to improve (1) clinical decision support, (2) access to information for patients and their families, (3) easier data sharing, and (4) accelerate secondary use of clinical data. Modeling the recommendations of the International League Against Epilepsy (ILAE) classification system in the form of an epilepsy domain ontology is essential for consistent use of terminology in a variety of applications, including electronic health records systems and clinical applications. In this review, we discuss the data management issues in epilepsy and explore the benefits of an ontology-driven informatics infrastructure and its role in adoption of a "data-driven" paradigm in epilepsy research. Wiley Periodicals, Inc.
© 2013 International League Against Epilepsy.

Entities:  

Keywords:  Biomedical ontologies; Clinical research; Epilepsy; Informatics; Large scale data management

Mesh:

Year:  2013        PMID: 23647220      PMCID: PMC3774789          DOI: 10.1111/epi.12211

Source DB:  PubMed          Journal:  Epilepsia        ISSN: 0013-9580            Impact factor:   5.864


  25 in total

1.  MiDas: automatic extraction of a common domain of discourse in sleep medicine for multi-center data integration.

Authors:  Satya S Sahoo; Chimezie Ogbuji; Lingyun Luo; Xiao Dong; Licong Cui; Susan S Redline; Guo-Qiang Zhang
Journal:  AMIA Annu Symp Proc       Date:  2011-10-22

2.  Introduction to the special section on M-Health: beyond seamless mobility and global wireless health-care connectivity.

Authors:  Robert Istepanian; Emil Jovanov; Y T Zhang
Journal:  IEEE Trans Inf Technol Biomed       Date:  2004-12

Review 3.  State of the nation in data integration for bioinformatics.

Authors:  Carole Goble; Robert Stevens
Journal:  J Biomed Inform       Date:  2008-02-05       Impact factor: 6.317

4.  SNOMED CT survey: an assessment of implementation in EMR/EHR applications.

Authors:  Kathy Giannangelo; Susan H Fenton
Journal:  Perspect Health Inf Manag       Date:  2008-05-20

5.  An ontology-driven semantic mashup of gene and biological pathway information: application to the domain of nicotine dependence.

Authors:  Satya S Sahoo; Olivier Bodenreider; Joni L Rutter; Karen J Skinner; Amit P Sheth
Journal:  J Biomed Inform       Date:  2008-02-29       Impact factor: 6.317

6.  Classification of the epilepsies. Proposal for an international classification.

Authors:  H Gastaut
Journal:  Epilepsia       Date:  1969       Impact factor: 5.864

7.  Report of the ILAE classification core group.

Authors:  Jerome Engel
Journal:  Epilepsia       Date:  2006-09       Impact factor: 5.864

8.  Proposal for revised clinical and electroencephalographic classification of epileptic seizures. From the Commission on Classification and Terminology of the International League Against Epilepsy.

Authors: 
Journal:  Epilepsia       Date:  1981-08       Impact factor: 5.864

9.  NCI Thesaurus: using science-based terminology to integrate cancer research results.

Authors:  Sherri de Coronado; Margaret W Haber; Nicholas Sioutos; Mark S Tuttle; Lawrence W Wright
Journal:  Stud Health Technol Inform       Date:  2004

10.  EpiDEA: extracting structured epilepsy and seizure information from patient discharge summaries for cohort identification.

Authors:  Licong Cui; Alireza Bozorgi; Samden D Lhatoo; Guo-Qiang Zhang; Satya S Sahoo
Journal:  AMIA Annu Symp Proc       Date:  2012-11-03
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  3 in total

1.  Anticonvulsant effect of piperine ameliorates memory impairment, inflammation and oxidative stress in a rat model of pilocarpine-induced epilepsy.

Authors:  Ke Mao; Ding Lei; Heng Zhang; Chao You
Journal:  Exp Ther Med       Date:  2016-12-27       Impact factor: 2.447

2.  MEDCIS: Multi-Modality Epilepsy Data Capture and Integration System.

Authors:  Guo-Qiang Zhang; Licong Cui; Samden Lhatoo; Stephan U Schuele; Satya S Sahoo
Journal:  AMIA Annu Symp Proc       Date:  2014-11-14

3.  The neurological disease ontology.

Authors:  Mark Jensen; Alexander P Cox; Naveed Chaudhry; Marcus Ng; Donat Sule; William Duncan; Patrick Ray; Bianca Weinstock-Guttman; Barry Smith; Alan Ruttenberg; Kinga Szigeti; Alexander D Diehl
Journal:  J Biomed Semantics       Date:  2013-12-06
  3 in total

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