Literature DB >> 23645087

Analysis on cDNA sequence, alternative splicing and polymorphisms associated with timing of puberty of Lin28B gene in goats.

Guiling Cao1, Qiuyue Liu, Mingxing Chu, Ran Di, Li Fang, Tao Feng, Ning Li.   

Abstract

Recently, variations in or near Lin28B gene were reported to be associated with timing of human puberty by genome-wide association studies. There have been no reports on that in other mammals. In the present study, a fragment of 5,353 bp of goat Lin28B cDNA, encoding 247 amino acids, was amplified, which contains 744 bp coding region and 4,410 bp 3'-untranslated region (UTR). Two alternative transcripts of Lin28BS (encoding 247 aa) and Lin28BL (encoding 261 aa) were found. Eight mutations in 3'-UTR were detected in nine goat breeds, and the T allele frequencies of A2934T and C3053T in the five sexual precocious breeds were higher than that of the four sexual late-maturing breeds (p<0.05). This may indicate that both the 2934 and 3053 locus may be associated with the age of goat puberty. Our results might expand understanding of the biological pathway of Lin28B gene regulating the timing of mammal puberty.

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Year:  2013        PMID: 23645087     DOI: 10.1007/s11033-013-2562-y

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  30 in total

1.  Distinct variants at LIN28B influence growth in height from birth to adulthood.

Authors:  Elisabeth Widén; Samuli Ripatti; Diana L Cousminer; Ida Surakka; Tuuli Lappalainen; Marjo-Riitta Järvelin; Johan G Eriksson; Olli Raitakari; Veikko Salomaa; Ulla Sovio; Anna-Liisa Hartikainen; Anneli Pouta; Mark I McCarthy; Clive Osmond; Eero Kajantie; Terho Lehtimäki; Jorma Viikari; Mika Kähönen; Chris Tyler-Smith; Nelson Freimer; Joel N Hirschhorn; Leena Peltonen; Aarno Palotie
Journal:  Am J Hum Genet       Date:  2010-04-15       Impact factor: 11.025

2.  Identification and characterization of lin-28 homolog B (LIN28B) in human hepatocellular carcinoma.

Authors:  Yingqiu Guo; Yongxin Chen; Hirotaka Ito; Akira Watanabe; Xijin Ge; Tatsuhiko Kodama; Hiroyuki Aburatani
Journal:  Gene       Date:  2006-07-28       Impact factor: 3.688

3.  TUT4 in concert with Lin28 suppresses microRNA biogenesis through pre-microRNA uridylation.

Authors:  Inha Heo; Chirlmin Joo; Young-Kook Kim; Minju Ha; Mi-Jeong Yoon; Jun Cho; Kyu-Hyeon Yeom; Jinju Han; V Narry Kim
Journal:  Cell       Date:  2009-08-21       Impact factor: 41.582

4.  Association study in Taiwanese girls with precocious puberty.

Authors:  I-Ching Chou; Chung-Hsing Wang; Wei-De Lin; Chang-Hai Tsai; Fuu-Jen Tsai
Journal:  J Pediatr Endocrinol Metab       Date:  2011       Impact factor: 1.634

5.  Lin28: A microRNA regulator with a macro role.

Authors:  Srinivas R Viswanathan; George Q Daley
Journal:  Cell       Date:  2010-02-19       Impact factor: 41.582

6.  Lin28A and Lin28B inhibit let-7 microRNA biogenesis by distinct mechanisms.

Authors:  Elena Piskounova; Christos Polytarchou; James E Thornton; Robert J LaPierre; Charalabos Pothoulakis; John P Hagan; Dimitrios Iliopoulos; Richard I Gregory
Journal:  Cell       Date:  2011-11-23       Impact factor: 41.582

7.  A feedback loop comprising lin-28 and let-7 controls pre-let-7 maturation during neural stem-cell commitment.

Authors:  Agnieszka Rybak; Heiko Fuchs; Lena Smirnova; Christine Brandt; Elena E Pohl; Robert Nitsch; F Gregory Wulczyn
Journal:  Nat Cell Biol       Date:  2008-07-06       Impact factor: 28.824

8.  Lin28 promotes transformation and is associated with advanced human malignancies.

Authors:  Srinivas R Viswanathan; John T Powers; William Einhorn; Yujin Hoshida; Tony L Ng; Sara Toffanin; Maureen O'Sullivan; Jun Lu; Letha A Phillips; Victoria L Lockhart; Samar P Shah; Pradeep S Tanwar; Craig H Mermel; Rameen Beroukhim; Mohammad Azam; Jose Teixeira; Matthew Meyerson; Timothy P Hughes; Josep M Llovet; Jerald Radich; Charles G Mullighan; Todd R Golub; Poul H Sorensen; George Q Daley
Journal:  Nat Genet       Date:  2009-05-31       Impact factor: 38.330

9.  Genome-wide association studies identify loci associated with age at menarche and age at natural menopause.

Authors:  Chunyan He; Peter Kraft; Constance Chen; Julie E Buring; Guillaume Paré; Susan E Hankinson; Stephen J Chanock; Paul M Ridker; David J Hunter; Daniel I Chasman
Journal:  Nat Genet       Date:  2009-05-17       Impact factor: 38.330

10.  Selective blockade of microRNA processing by Lin28.

Authors:  Srinivas R Viswanathan; George Q Daley; Richard I Gregory
Journal:  Science       Date:  2008-02-21       Impact factor: 47.728

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  1 in total

1.  Landscape of alternative splicing in Capra_hircus.

Authors:  Tieshan Xu; Feng Xu; Lihong Gu; Guang Rong; Mao Li; Fei Qiao; Liguang Shi; Dingfa Wang; Wanliang Xia; Wenjuan Xun; Ting Cao; Yiming Liu; Zhemin Lin; Hanlin Zhou
Journal:  Sci Rep       Date:  2018-10-11       Impact factor: 4.379

  1 in total

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