Literature DB >> 23638988

The regulation of cambial activity in Chinese fir (Cunninghamia lanceolata) involves extensive transcriptome remodeling.

Zongbo Qiu1, Lichuan Wan, Tong Chen, Yinglang Wan, Xinqiang He, Shanfa Lu, Yanwei Wang, Jinxing Lin.   

Abstract

Chinese fir (Cunninghamia lanceolata), a commercially important tree for the timber and pulp industry, is widely distributed in southern China and northern Vietnam, but its large and complex genome has hindered the development of genomic resources. Few efforts have focused on analysis of the modulation of transcriptional networks in vascular cambium during the transition from active growth to dormancy in conifers. Here, we used Illumina sequencing to analyze the global transcriptome alterations at the different stages of vascular cambium development in Chinese fir. By analyzing dynamic changes in the transcriptome of vascular cambium based on our RNA sequencing (RNA-Seq) data at the dormant, reactivating and active stages, many potentially interesting genes were identified that encoded putative regulators of cambial activity, cell division, cell expansion and cell wall biosynthesis and modification. In particular, the genes involved in transcriptional regulation and hormone signaling were highlighted to reveal their biological importance in the cambium development and wood formation. Our results reveal the dynamics of transcriptional networks and identify potential key components in the regulation of vascular cambium development in Chinese fir, which will contribute to the in-depth study of cambial differentiation and wood-forming candidate genes in conifers.
© 2013 The Authors. New Phytologist © 2013 New Phytologist Trust.

Entities:  

Keywords:  Chinese fir (Cunninghamia lanceolata); RNA-Seq; transcriptome; vascular cambium; wood formation

Mesh:

Substances:

Year:  2013        PMID: 23638988     DOI: 10.1111/nph.12301

Source DB:  PubMed          Journal:  New Phytol        ISSN: 0028-646X            Impact factor:   10.151


  31 in total

Review 1.  Redox regulation of plant development.

Authors:  Michael J Considine; Christine H Foyer
Journal:  Antioxid Redox Signal       Date:  2014-01-30       Impact factor: 8.401

2.  Is precipitation a trigger for the onset of xylogenesis in Juniperus przewalskii on the north-eastern Tibetan Plateau?

Authors:  Ping Ren; Sergio Rossi; Jozica Gricar; Eryuan Liang; Katarina Cufar
Journal:  Ann Bot       Date:  2015-03       Impact factor: 4.357

3.  De novo assembly and characterization of stress transcriptome and regulatory networks under temperature, salt and hormone stresses in Lilium lancifolium.

Authors:  Jingmao Wang; Qing Wang; Yang Yang; Xiaohua Liu; Jiahui Gu; Wenqi Li; Suliya Ma; Yingmin Lu
Journal:  Mol Biol Rep       Date:  2014-09-09       Impact factor: 2.316

4.  Comparative transcriptomic analysis of skeletal muscle tissue during prenatal stages in Tongcheng and Yorkshire pig using RNA-seq.

Authors:  Huijing Liu; Yu Xi; Guorong Liu; Yuqiang Zhao; Ji Li; Minggang Lei
Journal:  Funct Integr Genomics       Date:  2018-01-10       Impact factor: 3.410

5.  Transcriptome and Degradome Sequencing Reveals Dormancy Mechanisms of Cunninghamia lanceolata Seeds.

Authors:  Dechang Cao; Huimin Xu; Yuanyuan Zhao; Xin Deng; Yongxiu Liu; Wim J J Soppe; Jinxing Lin
Journal:  Plant Physiol       Date:  2016-10-19       Impact factor: 8.340

6.  Transcriptional Roadmap to Seasonal Variation in Wood Formation of Norway Spruce.

Authors:  Soile Jokipii-Lukkari; Nicolas Delhomme; Bastian Schiffthaler; Chanaka Mannapperuma; Jakob Prestele; Ove Nilsson; Nathaniel R Street; Hannele Tuominen
Journal:  Plant Physiol       Date:  2018-02-27       Impact factor: 8.340

7.  Global Reprogramming of Transcription in Chinese Fir (Cunninghamia lanceolata) during Progressive Drought Stress and after Rewatering.

Authors:  Ruiyang Hu; Bo Wu; Huiquan Zheng; Dehuo Hu; Xinjie Wang; Hongjing Duan; Yuhan Sun; Jinxing Wang; Yue Zhang; Yun Li
Journal:  Int J Mol Sci       Date:  2015-07-06       Impact factor: 5.923

8.  Isolation of High-Quality Total RNA from Chinese Fir (Cunninghamia lanceolata (Lamb.) Hook).

Authors:  Zhihui Ma; Binlong Huang; Shanshan Xu; Yu Chen; Shubin Li; Sizu Lin
Journal:  PLoS One       Date:  2015-06-17       Impact factor: 3.240

9.  GA3 is superior to GA4 in promoting bud endodormancy release in tree peony (Paeonia suffruticosa) and their potential working mechanism.

Authors:  Zhang Yuxi; Yuan Yanchao; Liu Zejun; Zhang Tao; Li Feng; Liu Chunying; Gai Shupeng
Journal:  BMC Plant Biol       Date:  2021-07-05       Impact factor: 4.215

10.  Transcriptome-wide analysis supports environmental adaptations of two Pinus pinaster populations from contrasting habitats.

Authors:  Rafael A Cañas; Isabel Feito; José Francisco Fuente-Maqueda; Concepción Ávila; Juan Majada; Francisco M Cánovas
Journal:  BMC Genomics       Date:  2015-11-06       Impact factor: 3.969

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.