Literature DB >> 23635866

Can we detect oceanic biodiversity hotspots from space?

Silvia De Monte1, Alice Soccodato, Séverine Alvain, Francesco d'Ovidio.   

Abstract

Understanding the variability of marine biodiversity is a central issue in microbiology. Current observational programs are based on in situ studies, but their implementation at the global scale is particularly challenging, owing to the ocean extent, its temporal variability and the heterogeneity of the data sources on which compilations are built. Here, we explore the possibility of identifying phytoplanktonic biodiversity hotspots from satellite. We define a Shannon entropy index based on patchiness in ocean color bio-optical anomalies. This index provides a high resolution (1 degree) global coverage. It shows a relation to temperature and mid-latitude maxima in accordance with those previously evidenced in microbiological biodiversity model and observational studies. Regional maxima are in remarkable agreement with several known biodiversity hotspots for plankton organisms and even for higher levels of the marine trophic chain, as well as with some in situ planktonic biodiversity estimates (from Atlantic Meridional Transect cruise). These results encourage to explore marine biodiversity with a coordinated effort of the molecular, ecological and remote sensing communities.

Mesh:

Year:  2013        PMID: 23635866      PMCID: PMC3965306          DOI: 10.1038/ismej.2013.72

Source DB:  PubMed          Journal:  ISME J        ISSN: 1751-7362            Impact factor:   10.302


  14 in total

1.  Global biodiversity patterns of marine phytoplankton and zooplankton.

Authors:  Xabier Irigoien; Jef Huisman; Roger P Harris
Journal:  Nature       Date:  2004-06-24       Impact factor: 49.962

2.  On the generality of the latitudinal diversity gradient.

Authors:  Helmut Hillebrand
Journal:  Am Nat       Date:  2004-01-15       Impact factor: 3.926

3.  Fluid dynamical niches of phytoplankton types.

Authors:  Francesco d'Ovidio; Silvia De Monte; Séverine Alvain; Yves Dandonneau; Marina Lévy
Journal:  Proc Natl Acad Sci U S A       Date:  2010-10-25       Impact factor: 11.205

4.  Global patterns of predator diversity in the open oceans.

Authors:  Boris Worm; Marcel Sandow; Andreas Oschlies; Heike K Lotze; Ransom A Myers
Journal:  Science       Date:  2005-07-28       Impact factor: 47.728

5.  The marine microbial world: a voyage of discovery.

Authors:  Susan Elizabeth Jones
Journal:  ISME J       Date:  2007-10       Impact factor: 10.302

6.  Patterns of diversity in marine phytoplankton.

Authors:  Andrew D Barton; Stephanie Dutkiewicz; Glenn Flierl; Jason Bragg; Michael J Follows
Journal:  Science       Date:  2010-02-25       Impact factor: 47.728

7.  Toward molecular trait-based ecology through integration of biogeochemical, geographical and metagenomic data.

Authors:  Jeroen Raes; Ivica Letunic; Takuji Yamada; Lars Juhl Jensen; Peer Bork
Journal:  Mol Syst Biol       Date:  2011-03-15       Impact factor: 11.429

8.  Current and future patterns of global marine mammal biodiversity.

Authors:  Kristin Kaschner; Derek P Tittensor; Jonathan Ready; Tim Gerrodette; Boris Worm
Journal:  PLoS One       Date:  2011-05-23       Impact factor: 3.240

9.  Global patterns of bacterial beta-diversity in seafloor and seawater ecosystems.

Authors:  Lucie Zinger; Linda A Amaral-Zettler; Jed A Fuhrman; M Claire Horner-Devine; Susan M Huse; David B Mark Welch; Jennifer B H Martiny; Mitchell Sogin; Antje Boetius; Alban Ramette
Journal:  PLoS One       Date:  2011-09-08       Impact factor: 3.240

10.  The Sorcerer II Global Ocean Sampling expedition: northwest Atlantic through eastern tropical Pacific.

Authors:  Douglas B Rusch; Aaron L Halpern; Granger Sutton; Karla B Heidelberg; Shannon Williamson; Shibu Yooseph; Dongying Wu; Jonathan A Eisen; Jeff M Hoffman; Karin Remington; Karen Beeson; Bao Tran; Hamilton Smith; Holly Baden-Tillson; Clare Stewart; Joyce Thorpe; Jason Freeman; Cynthia Andrews-Pfannkoch; Joseph E Venter; Kelvin Li; Saul Kravitz; John F Heidelberg; Terry Utterback; Yu-Hui Rogers; Luisa I Falcón; Valeria Souza; Germán Bonilla-Rosso; Luis E Eguiarte; David M Karl; Shubha Sathyendranath; Trevor Platt; Eldredge Bermingham; Victor Gallardo; Giselle Tamayo-Castillo; Michael R Ferrari; Robert L Strausberg; Kenneth Nealson; Robert Friedman; Marvin Frazier; J Craig Venter
Journal:  PLoS Biol       Date:  2007-03       Impact factor: 8.029

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  8 in total

1.  The dynamical landscape of marine phytoplankton diversity.

Authors:  Marina Lévy; Oliver Jahn; Stephanie Dutkiewicz; Michael J Follows; Francesco d'Ovidio
Journal:  J R Soc Interface       Date:  2015-10-06       Impact factor: 4.118

2.  Fixation probabilities in weakly compressible fluid flows.

Authors:  Abigail Plummer; Roberto Benzi; David R Nelson; Federico Toschi
Journal:  Proc Natl Acad Sci U S A       Date:  2018-12-26       Impact factor: 11.205

3.  Stratifying ocean sampling globally and with depth to account for environmental variability.

Authors:  Mark John Costello; Zeenatul Basher; Roger Sayre; Sean Breyer; Dawn J Wright
Journal:  Sci Rep       Date:  2018-07-26       Impact factor: 4.379

Review 4.  The role of submesoscale currents in structuring marine ecosystems.

Authors:  Marina Lévy; Peter J S Franks; K Shafer Smith
Journal:  Nat Commun       Date:  2018-11-12       Impact factor: 14.919

5.  Contrasting biogeography and diversity patterns between diatoms and haptophytes in the central Pacific Ocean.

Authors:  Hisashi Endo; Hiroyuki Ogata; Koji Suzuki
Journal:  Sci Rep       Date:  2018-07-19       Impact factor: 4.379

6.  Co-occurrence Analysis of Microbial Taxa in the Atlantic Ocean Reveals High Connectivity in the Free-Living Bacterioplankton.

Authors:  Mathias Milici; Zhi-Luo Deng; Jürgen Tomasch; Johan Decelle; Melissa L Wos-Oxley; Hui Wang; Ruy Jáuregui; Iris Plumeier; Helge-Ansgar Giebel; Thomas H Badewien; Mascha Wurst; Dietmar H Pieper; Meinhard Simon; Irene Wagner-Döbler
Journal:  Front Microbiol       Date:  2016-05-06       Impact factor: 5.640

7.  Bacterioplankton Biogeography of the Atlantic Ocean: A Case Study of the Distance-Decay Relationship.

Authors:  Mathias Milici; Jürgen Tomasch; Melissa L Wos-Oxley; Johan Decelle; Ruy Jáuregui; Hui Wang; Zhi-Luo Deng; Iris Plumeier; Helge-Ansgar Giebel; Thomas H Badewien; Mascha Wurst; Dietmar H Pieper; Meinhard Simon; Irene Wagner-Döbler
Journal:  Front Microbiol       Date:  2016-04-26       Impact factor: 5.640

8.  Fine-scale structures as spots of increased fish concentration in the open ocean.

Authors:  Alberto Baudena; Enrico Ser-Giacomi; Donatella D'Onofrio; Xavier Capet; Cedric Cotté; Yves Cherel; Francesco D'Ovidio
Journal:  Sci Rep       Date:  2021-08-04       Impact factor: 4.379

  8 in total

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