Literature DB >> 23634143

4-(Dec-yloxy)phenyl 2-oxo-7-trifluoro-methyl-2H-chromene-3-carboxyl-ate.

B S Palakshamurthy1, H C Devarajegowda, H T Srinivasa, S Sreenivasa.   

Abstract

The title compound, C27H29F3O5, is a liquid crystal (LC) and exhibits enanti-otropic SmA phase transitions. In the crystal, the dihedral angle between the 2H-chromene ring system and the benzene ring is 62.97 (2)°. The three F atoms of the -CF3 group are disordered over two sets of sites with occupancy factors 0.71 (4):0.29 (4). In the crystal, pairs of C-H⋯O hydrogen bonds form inversion dimers and generate R 2 (2)(10) rings. The structure also features C-H⋯F and C-H⋯π inter-actions along [100] and [010], respectively.

Entities:  

Year:  2013        PMID: 23634143      PMCID: PMC3629656          DOI: 10.1107/S1600536813008222

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis and liquid crystal behaviour of the title compound, see: Mahadevan et al. (2013 ▶). For the biological activity of coumarins and their derivatives, see: Borges et al. (2005 ▶); Kontogiorgis & Hadjipavlou-Litina (2005 ▶) and for their industrial applications, see: Hejchman et al. (2011 ▶). For the structure of 4-(oct­yloxy)phenyl 2-oxo-2H-chromene-3-carboxyl­ate, see: Palakshamurthy et al. (2013 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C27H29F3O5 M = 490.50 Monoclinic, a = 27.85 (3) Å b = 9.281 (10) Å c = 9.981 (11) Å β = 94.849 (18)° V = 2571 (5) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 99 K 0.52 × 0.42 × 0.40 mm

Data collection

Bruker APEXII diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2007 ▶) T min = 0.950, T max = 0.961 21163 measured reflections 4448 independent reflections 2547 reflections with I > 2σ(I) R int = 0.073

Refinement

R[F 2 > 2σ(F 2)] = 0.084 wR(F 2) = 0.221 S = 1.07 4448 reflections 344 parameters H-atom parameters constrained Δρmax = 0.18 e Å−3 Δρmin = −0.17 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: APEX2 and SAINT-Plus (Bruker, 2009 ▶); data reduction: SAINT-Plus and XPREP (Bruker, 2009 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶) and Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: SHELXL97. Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813008222/sj5309sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813008222/sj5309Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813008222/sj5309Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C27H29F3O5prism
Mr = 490.50Dx = 1.267 Mg m3
Monoclinic, P21/cMelting point: 418 K
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71073 Å
a = 27.85 (3) ÅCell parameters from 2547 reflections
b = 9.281 (10) Åθ = 2.2–25°
c = 9.981 (11) ŵ = 0.10 mm1
β = 94.849 (18)°T = 99 K
V = 2571 (5) Å3Prism, colourless
Z = 40.52 × 0.42 × 0.40 mm
F(000) = 1032
Bruker APEXII diffractometer4448 independent reflections
Radiation source: fine-focus sealed tube2547 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.073
φ and ω scansθmax = 25.0°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Sheldrick, 2007)h = −33→33
Tmin = 0.950, Tmax = 0.961k = −11→11
21163 measured reflectionsl = −11→11
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.084Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.221H-atom parameters constrained
S = 1.07w = 1/[σ2(Fo2) + (0.0928P)2 + 0.7006P] where P = (Fo2 + 2Fc2)/3
4448 reflections(Δ/σ)max = 0.004
344 parametersΔρmax = 0.18 e Å3
0 restraintsΔρmin = −0.17 e Å3
0 constraints
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
C251.0692 (2)0.6151 (7)−0.3351 (7)0.150 (2)
H25A1.08670.6580−0.25430.179*
H25B1.07160.5093−0.32410.179*
C241.0184 (2)0.6518 (7)−0.3292 (7)0.153 (2)
H24A1.01620.7579−0.33810.184*
H24B1.00120.6110−0.41130.184*
C20.31670 (15)0.6261 (4)0.2849 (4)0.0741 (11)
C10.26593 (19)0.6458 (7)0.3228 (6)0.0935 (13)
C271.1456 (2)0.6184 (9)−0.4560 (9)0.208 (4)
H27A1.15560.6545−0.54170.312*
H27B1.15020.5138−0.45140.312*
H27C1.16520.6643−0.38160.312*
C261.0960 (3)0.6514 (10)−0.4462 (8)0.213 (4)
H26A1.07830.6082−0.52650.256*
H26B1.09310.7571−0.45720.256*
F10.2363 (3)0.694 (2)0.2215 (10)0.137 (6)0.71 (4)
F20.2468 (5)0.5236 (12)0.361 (3)0.159 (9)0.71 (4)
F30.2620 (2)0.739 (2)0.4226 (19)0.145 (8)0.71 (4)
F1A0.2625 (6)0.621 (7)0.450 (2)0.154 (19)0.29 (4)
F2A0.2343 (8)0.556 (5)0.269 (5)0.147 (17)0.29 (4)
F3A0.2475 (14)0.766 (3)0.303 (7)0.18 (3)0.29 (4)
O10.43973 (9)0.6693 (2)0.4333 (2)0.0641 (7)
O40.57932 (9)0.6725 (3)0.2856 (2)0.0709 (7)
C100.46005 (13)0.5620 (3)0.1853 (3)0.0632 (10)
H100.46670.52240.10110.076*
C50.41071 (13)0.5803 (3)0.2142 (3)0.0589 (9)
O20.51778 (10)0.6830 (3)0.4977 (2)0.0840 (8)
C30.35544 (15)0.6606 (4)0.3744 (4)0.0694 (10)
H30.35030.70040.45970.083*
C80.48791 (14)0.6551 (3)0.4068 (3)0.0577 (9)
C40.40217 (13)0.6371 (3)0.3396 (3)0.0576 (9)
C90.49690 (13)0.5990 (3)0.2735 (3)0.0551 (8)
O30.55682 (9)0.4843 (3)0.1529 (3)0.0868 (9)
C60.37051 (14)0.5468 (4)0.1238 (4)0.0765 (11)
H60.37550.50860.03780.092*
C110.54679 (13)0.5768 (4)0.2315 (3)0.0611 (9)
C70.32407 (15)0.5687 (4)0.1581 (4)0.0843 (12)
H70.29730.54510.09650.101*
C120.62703 (14)0.6568 (4)0.2462 (4)0.0668 (10)
C170.64238 (15)0.7362 (4)0.1429 (4)0.0784 (11)
H170.62060.80010.09440.094*
C150.72109 (15)0.6315 (5)0.1777 (5)0.0847 (12)
C160.68960 (15)0.7248 (4)0.1077 (4)0.0831 (12)
H160.70000.78090.03600.100*
O50.76854 (11)0.6082 (4)0.1512 (4)0.1166 (11)
C130.65845 (18)0.5638 (5)0.3158 (4)0.0971 (14)
H130.64800.50830.38780.117*
C140.70536 (18)0.5511 (6)0.2811 (5)0.1108 (16)
H140.72690.48630.32920.133*
C190.83692 (17)0.6115 (6)0.0247 (5)0.1171 (17)
H19A0.85730.63860.10700.141*
H19B0.83500.50500.02250.141*
C180.78703 (16)0.6698 (5)0.0363 (5)0.1025 (15)
H18A0.78820.77600.04500.123*
H18B0.76590.6451−0.04530.123*
C200.86150 (18)0.6598 (6)−0.0933 (6)0.1232 (18)
H20A0.86090.7665−0.09520.148*
H20B0.84250.6257−0.17540.148*
C230.99056 (18)0.6129 (7)−0.2183 (6)0.134 (2)
H23A1.00810.6518−0.13570.161*
H23B0.99200.5066−0.21070.161*
C210.91271 (18)0.6116 (7)−0.1003 (6)0.1294 (19)
H21A0.93130.6457−0.01740.155*
H21B0.91280.5050−0.09690.155*
C220.9393 (2)0.6543 (7)−0.2135 (6)0.137 (2)
H22A0.93770.7607−0.21970.165*
H22B0.92160.6160−0.29600.165*
U11U22U33U12U13U23
C250.088 (4)0.175 (6)0.191 (6)0.014 (4)0.044 (4)0.019 (5)
C240.103 (4)0.190 (6)0.172 (6)0.028 (4)0.051 (4)0.016 (5)
C20.076 (3)0.068 (2)0.081 (3)0.002 (2)0.025 (2)0.011 (2)
C10.090 (4)0.099 (4)0.095 (4)0.004 (3)0.026 (3)0.011 (3)
C270.108 (5)0.243 (9)0.282 (10)0.012 (5)0.066 (6)0.009 (8)
C260.137 (7)0.279 (10)0.235 (9)0.037 (6)0.088 (6)0.023 (8)
F10.097 (4)0.197 (15)0.118 (6)0.045 (6)0.021 (4)0.027 (6)
F20.103 (8)0.120 (6)0.26 (2)0.014 (5)0.083 (12)0.075 (10)
F30.094 (4)0.190 (15)0.158 (11)0.008 (6)0.043 (5)−0.069 (11)
F1A0.106 (11)0.25 (5)0.117 (13)0.009 (18)0.061 (9)0.032 (18)
F2A0.083 (10)0.15 (3)0.21 (3)−0.011 (12)0.038 (14)−0.03 (2)
F3A0.18 (2)0.12 (2)0.27 (6)0.079 (18)0.10 (4)0.07 (3)
O10.0811 (17)0.0674 (15)0.0456 (13)0.0026 (12)0.0160 (12)−0.0070 (11)
O40.0756 (17)0.0752 (16)0.0639 (15)−0.0077 (13)0.0181 (12)−0.0240 (13)
C100.083 (3)0.067 (2)0.0423 (19)−0.0066 (18)0.0218 (19)−0.0059 (16)
C50.072 (2)0.059 (2)0.0467 (19)−0.0125 (17)0.0157 (18)−0.0017 (15)
O20.089 (2)0.115 (2)0.0480 (14)0.0021 (16)0.0037 (14)−0.0223 (14)
C30.086 (3)0.064 (2)0.061 (2)0.004 (2)0.025 (2)0.0030 (17)
C80.078 (3)0.0537 (19)0.0421 (19)0.0018 (17)0.0112 (18)−0.0019 (15)
C40.076 (2)0.0484 (18)0.050 (2)−0.0019 (16)0.0143 (18)0.0045 (15)
C90.077 (2)0.0517 (18)0.0377 (18)−0.0050 (16)0.0124 (17)−0.0009 (14)
O30.0876 (19)0.0923 (19)0.0828 (18)−0.0046 (15)0.0212 (15)−0.0405 (15)
C60.081 (3)0.091 (3)0.060 (2)−0.017 (2)0.019 (2)−0.006 (2)
C110.080 (3)0.062 (2)0.0414 (18)−0.0022 (19)0.0086 (17)−0.0041 (16)
C70.078 (3)0.102 (3)0.074 (3)−0.013 (2)0.011 (2)−0.001 (2)
C120.071 (2)0.070 (2)0.059 (2)0.002 (2)0.0062 (19)−0.0184 (19)
C170.078 (3)0.072 (2)0.086 (3)0.002 (2)0.011 (2)0.004 (2)
C150.069 (3)0.096 (3)0.090 (3)0.002 (2)0.012 (2)−0.013 (3)
C160.070 (3)0.081 (3)0.100 (3)−0.005 (2)0.017 (2)0.005 (2)
O50.076 (2)0.146 (3)0.129 (3)0.0163 (19)0.013 (2)0.006 (2)
C130.105 (4)0.118 (4)0.070 (3)0.015 (3)0.019 (2)0.016 (3)
C140.094 (4)0.144 (4)0.096 (3)0.037 (3)0.011 (3)0.018 (3)
C190.067 (3)0.150 (5)0.135 (4)0.004 (3)0.016 (3)0.000 (4)
C180.077 (3)0.105 (3)0.128 (4)−0.007 (3)0.026 (3)−0.015 (3)
C200.085 (3)0.138 (4)0.151 (5)0.009 (3)0.035 (3)−0.007 (4)
C230.077 (3)0.161 (5)0.166 (5)0.012 (3)0.028 (3)0.015 (4)
C210.076 (3)0.160 (5)0.154 (5)0.011 (3)0.022 (3)0.013 (4)
C220.091 (4)0.171 (5)0.154 (5)0.020 (4)0.036 (4)0.003 (4)
C25—C261.429 (8)C9—C111.499 (5)
C25—C241.460 (8)O3—C111.212 (4)
C25—H25A0.9900C6—C71.381 (5)
C25—H25B0.9900C6—H60.9500
C24—C231.451 (7)C7—H70.9500
C24—H24A0.9900C12—C171.365 (5)
C24—H24B0.9900C12—C131.375 (5)
C2—C31.379 (5)C17—C161.394 (5)
C2—C71.404 (5)C17—H170.9500
C2—C11.506 (6)C15—C141.375 (6)
C1—F3A1.234 (17)C15—C161.380 (6)
C1—F1A1.300 (18)C15—O51.387 (5)
C1—F2A1.30 (2)C16—H160.9500
C1—F21.323 (11)O5—C181.417 (5)
C1—F11.329 (9)C13—C141.385 (6)
C1—F31.332 (9)C13—H130.9500
C27—C261.426 (9)C14—H140.9500
C27—H27A0.9800C19—C201.481 (7)
C27—H27B0.9800C19—C181.505 (6)
C27—H27C0.9800C19—H19A0.9900
C26—H26A0.9900C19—H19B0.9900
C26—H26B0.9900C18—H18A0.9900
O1—C41.376 (4)C18—H18B0.9900
O1—C81.396 (4)C20—C211.502 (7)
O4—C111.349 (4)C20—H20A0.9900
O4—C121.425 (4)C20—H20B0.9900
C10—C91.339 (5)C23—C221.482 (7)
C10—C51.438 (5)C23—H23A0.9900
C10—H100.9500C23—H23B0.9900
C5—C41.397 (4)C21—C221.458 (7)
C5—C61.412 (5)C21—H21A0.9900
O2—C81.206 (4)C21—H21B0.9900
C3—C41.392 (5)C22—H22A0.9900
C3—H30.9500C22—H22B0.9900
C8—C91.469 (4)
C26—C25—C24123.3 (7)C10—C9—C11117.2 (3)
C26—C25—H25A106.5C8—C9—C11122.3 (3)
C24—C25—H25A106.5C7—C6—C5121.2 (4)
C26—C25—H25B106.5C7—C6—H6119.4
C24—C25—H25B106.5C5—C6—H6119.4
H25A—C25—H25B106.5O3—C11—O4122.8 (3)
C23—C24—C25123.7 (6)O3—C11—C9123.3 (3)
C23—C24—H24A106.4O4—C11—C9113.9 (3)
C25—C24—H24A106.4C6—C7—C2119.4 (4)
C23—C24—H24B106.4C6—C7—H7120.3
C25—C24—H24B106.4C2—C7—H7120.3
H24A—C24—H24B106.5C17—C12—C13119.6 (4)
C3—C2—C7120.4 (4)C17—C12—O4120.8 (3)
C3—C2—C1120.6 (4)C13—C12—O4119.6 (4)
C7—C2—C1119.0 (4)C12—C17—C16120.8 (4)
F3A—C1—F1A104.7 (15)C12—C17—H17119.6
F3A—C1—F2A104.9 (19)C16—C17—H17119.6
F1A—C1—F2A100.8 (14)C14—C15—C16119.4 (4)
F3A—C1—F2130.3 (12)C14—C15—O5115.4 (4)
F1A—C1—F260.1 (18)C16—C15—O5125.2 (4)
F2A—C1—F244.9 (18)C15—C16—C17119.5 (4)
F3A—C1—F150 (3)C15—C16—H16120.2
F1A—C1—F1135.3 (10)C17—C16—H16120.2
F2A—C1—F163 (2)C15—O5—C18120.6 (4)
F2—C1—F1105.6 (10)C12—C13—C14120.1 (4)
F3A—C1—F358 (3)C12—C13—H13120.0
F1A—C1—F351 (2)C14—C13—H13120.0
F2A—C1—F3129.4 (10)C15—C14—C13120.6 (4)
F2—C1—F3106.4 (8)C15—C14—H14119.7
F1—C1—F3105.3 (7)C13—C14—H14119.7
F3A—C1—C2117.1 (10)C20—C19—C18116.3 (5)
F1A—C1—C2111.8 (10)C20—C19—H19A108.2
F2A—C1—C2115.8 (9)C18—C19—H19A108.2
F2—C1—C2112.2 (6)C20—C19—H19B108.2
F1—C1—C2112.7 (5)C18—C19—H19B108.2
F3—C1—C2113.9 (6)H19A—C19—H19B107.4
C26—C27—H27A109.5O5—C18—C19108.5 (4)
C26—C27—H27B109.5O5—C18—H18A110.0
H27A—C27—H27B109.5C19—C18—H18A110.0
C26—C27—H27C109.5O5—C18—H18B110.0
H27A—C27—H27C109.5C19—C18—H18B110.0
H27B—C27—H27C109.5H18A—C18—H18B108.4
C27—C26—C25125.2 (8)C19—C20—C21116.8 (5)
C27—C26—H26A106.0C19—C20—H20A108.1
C25—C26—H26A106.0C21—C20—H20A108.1
C27—C26—H26B106.0C19—C20—H20B108.1
C25—C26—H26B106.0C21—C20—H20B108.1
H26A—C26—H26B106.3H20A—C20—H20B107.3
C4—O1—C8122.6 (3)C24—C23—C22122.6 (5)
C11—O4—C12115.6 (3)C24—C23—H23A106.7
C9—C10—C5122.1 (3)C22—C23—H23A106.7
C9—C10—H10119.0C24—C23—H23B106.7
C5—C10—H10119.0C22—C23—H23B106.7
C4—C5—C6118.0 (3)H23A—C23—H23B106.6
C4—C5—C10117.5 (3)C22—C21—C20120.2 (5)
C6—C5—C10124.5 (3)C22—C21—H21A107.3
C2—C3—C4119.9 (3)C20—C21—H21A107.3
C2—C3—H3120.0C22—C21—H21B107.3
C4—C3—H3120.0C20—C21—H21B107.3
O2—C8—O1116.8 (3)H21A—C21—H21B106.9
O2—C8—C9126.7 (3)C21—C22—C23120.6 (5)
O1—C8—C9116.4 (3)C21—C22—H22A107.2
O1—C4—C3118.0 (3)C23—C22—H22A107.2
O1—C4—C5120.9 (3)C21—C22—H22B107.2
C3—C4—C5121.1 (4)C23—C22—H22B107.2
C10—C9—C8120.4 (3)H22A—C22—H22B106.8
D—H···AD—HH···AD···AD—H···A
C10—H10···O3i0.952.563.396 (5)146
C27—H27C···F1ii0.982.523.432 (13)154
C6—H6···Cg2i0.953.093.899144
C16—H16···Cg2iii0.953.334.120142
C3—H3···Cg1iv0.953.434.325163
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 and Cg2 are the centroids of the C2–C7 and C12–C17 rings respectively.

D—H⋯A D—HH⋯A DA D—H⋯A
C10—H10⋯O3i 0.952.563.396 (5)146
C27—H27C⋯F1ii 0.982.523.432 (13)154
C6—H6⋯Cg2i 0.953.093.899144
C16—H16⋯Cg2iii 0.953.334.120142
C3—H3⋯Cg1iv 0.953.434.325163

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Synthesis and antiinflammatory activity of coumarin derivatives.

Authors:  Christos A Kontogiorgis; Dimitra J Hadjipavlou-Litina
Journal:  J Med Chem       Date:  2005-10-06       Impact factor: 7.446

Review 3.  Simple coumarins and analogues in medicinal chemistry: occurrence, synthesis and biological activity.

Authors:  F Borges; F Roleira; N Milhazes; L Santana; E Uriarte
Journal:  Curr Med Chem       Date:  2005       Impact factor: 4.530

4.  4-(Oct-yloxy)phenyl 2-oxo-2H-chromene-3-carboxyl-ate.

Authors:  B S Palakshamurthy; S Sreenivasa; H T Srinivasa; K R Roopashree; H C Devarajegowda
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-01-09
  4 in total
  2 in total

1.  Crystal structure of 4-bromo-phenyl-2-oxo-2H-chromene-3-carboxyl-ate.

Authors:  H C Devarajegowda; P A Suchetan; H T Srinivasa; S Sreenivasa; B S Palakshamurthy
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-04-22

2.  4-[4-(Hept-yloxy)benzo-yloxy]phenyl 2-oxo-7-tri-fluoro-methyl-2H-chromene-3-carboxyl-ate.

Authors:  H C Devarajegowda; B S Palakshamurthy; H N Harishkumar; P A Suchetan; S Sreenivasa
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-07-31
  2 in total

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