Literature DB >> 23634105

2,4,6-Trinitro-phenyl 4-chloro-benzoate.

Rodolfo Moreno-Fuquen1, Fabricio Mosquera, Javier Ellena, Juan C Tenorio, Carlos A De Simone.   

Abstract

In the title benzoate derivative, C13H6ClN3O8, the planes of the benzene rings form a dihedral angle of 63.46 (5)°. The dihedral angles between the benzene ring and its nitro groups are 12.78 (16)° for the first ortho, 28.4 (4) and 17.4 (4)° for the second (disordered) ortho and 3.58 (16)° for the para nitro group. The central ester moiety, -C-(C=O)-O-, is essentially planar (r.m.s. deviation for all non-H atoms = 0.0229 Å) and forms dihedral angles of 7.37 (14)° with the chloro-substituted benzene ring and 69.85 (6)° with the trinitro-substituted benzene ring. One of the nitro groups was refined as disordered over two sets of sites with fixed site occupancies of 0.61 and 0.39. In the crystal, mol-ecules are linked by weak C-H⋯O hydrogen bonds, forming a three-dimensional network.

Entities:  

Year:  2013        PMID: 23634105      PMCID: PMC3629618          DOI: 10.1107/S1600536813007332

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the industrial and synthetic applications of nitroaryl compounds, see: Moreno-Fuquen et al. (2012a ▶) and references therein. For similar structures, see: Moreno-Fuquen et al. (2012b ▶,c ▶). For hydrogen bonding, see: Nardelli (1995 ▶). For hydrogen-bond motifs, see: Etter et al. (1990 ▶). For a description of the Cambridge Structural Database (CSD), see: Allen (2002 ▶).

Experimental

Crystal data

C13H6ClN3O8 M = 367.66 Monoclinic, a = 9.3526 (3) Å b = 11.4793 (3) Å c = 13.6089 (4) Å β = 93.612 (2)° V = 1458.17 (7) Å3 Z = 4 Mo Kα radiation μ = 0.32 mm−1 T = 295 K 0.35 × 0.31 × 0.24 mm

Data collection

Nonius KappaCCD diffractometer 15908 measured reflections 3288 independent reflections 2424 reflections with I > 2σ(I) R int = 0.040

Refinement

R[F 2 > 2σ(F 2)] = 0.048 wR(F 2) = 0.151 S = 1.02 3288 reflections 246 parameters H-atom parameters constrained Δρmax = 0.30 e Å−3 Δρmin = −0.24 e Å−3 Data collection: COLLECT (Nonius, 2000 ▶); cell refinement: SCALEPACK (Otwinowski & Minor, 1997 ▶); data reduction: DENZO (Otwinowski & Minor, 1997 ▶) and SCALEPACK; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶) and Mercury (Macrae et al., 2006 ▶); software used to prepare material for publication: WinGX (Farrugia, 2012 ▶). Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813007332/lh5591sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813007332/lh5591Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813007332/lh5591Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H6ClN3O8F(000) = 744
Mr = 367.66Dx = 1.675 Mg m3
Monoclinic, P21/cMelting point: 433(1) K
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71073 Å
a = 9.3526 (3) ÅCell parameters from 7848 reflections
b = 11.4793 (3) Åθ = 2.6–27.5°
c = 13.6089 (4) ŵ = 0.32 mm1
β = 93.612 (2)°T = 295 K
V = 1458.17 (7) Å3Block, pale-yellow
Z = 40.35 × 0.31 × 0.24 mm
Nonius KappaCCD diffractometer2424 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.040
Graphite monochromatorθmax = 27.5°, θmin = 2.8°
CCD rotation images, thick slices scansh = −12→12
15908 measured reflectionsk = −14→14
3288 independent reflectionsl = −17→17
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.048H-atom parameters constrained
wR(F2) = 0.151w = 1/[σ2(Fo2) + (0.091P)2 + 0.2737P] where P = (Fo2 + 2Fc2)/3
S = 1.02(Δ/σ)max < 0.001
3288 reflectionsΔρmax = 0.30 e Å3
246 parametersΔρmin = −0.24 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.045 (6)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
Cl10.70639 (6)0.72855 (7)1.22374 (4)0.0773 (3)
N10.2976 (2)0.57696 (14)0.65153 (12)0.0561 (4)
N2−0.07414 (19)0.80404 (16)0.47344 (13)0.0582 (4)
N30.1244 (2)0.95193 (16)0.78955 (13)0.0630 (5)
O10.40062 (19)0.57284 (15)0.70877 (13)0.0772 (5)
O20.2690 (3)0.50235 (18)0.59209 (18)0.1161 (9)
O3−0.0786 (2)0.72668 (17)0.41290 (15)0.0935 (7)
O4−0.14293 (19)0.89346 (16)0.46545 (13)0.0783 (5)
O5A0.0210 (6)1.0035 (5)0.7997 (4)0.1039 (15)0.61
O6A0.2343 (8)0.9689 (6)0.8395 (6)0.169 (3)0.61
O5B0.0649 (8)1.0471 (5)0.7629 (5)0.0839 (18)0.39
O6B0.1736 (9)0.9336 (6)0.8683 (3)0.083 (2)0.39
O70.31371 (15)0.75992 (11)0.80241 (10)0.0511 (3)
O80.19504 (17)0.61439 (15)0.87062 (11)0.0698 (5)
C10.21381 (19)0.76369 (15)0.72449 (12)0.0427 (4)
C20.20321 (19)0.67959 (15)0.65074 (12)0.0438 (4)
C30.1074 (2)0.69124 (15)0.56973 (13)0.0469 (4)
H30.10000.63390.52140.056*
C40.0233 (2)0.78926 (15)0.56216 (13)0.0461 (4)
C50.0276 (2)0.87387 (16)0.63325 (13)0.0479 (4)
H5−0.03190.93870.62740.057*
C60.1229 (2)0.85976 (15)0.71372 (12)0.0455 (4)
C70.2931 (2)0.67990 (16)0.87591 (12)0.0457 (4)
C80.40200 (19)0.69270 (15)0.95775 (12)0.0435 (4)
C90.5009 (2)0.78335 (17)0.96322 (14)0.0522 (5)
H90.50370.83660.91190.063*
C100.5950 (2)0.79402 (19)1.04504 (15)0.0574 (5)
H100.66070.85491.04940.069*
C110.5907 (2)0.71382 (18)1.12019 (14)0.0528 (5)
C120.4945 (2)0.62241 (17)1.11557 (13)0.0513 (4)
H120.49360.56871.16670.062*
C130.3999 (2)0.61173 (16)1.03421 (12)0.0469 (4)
H130.33460.55051.03020.056*
U11U22U33U12U13U23
Cl10.0639 (4)0.1147 (6)0.0505 (3)−0.0004 (3)−0.0189 (2)0.0022 (3)
N10.0678 (11)0.0510 (9)0.0490 (9)0.0095 (7)0.0005 (8)0.0062 (7)
N20.0568 (10)0.0640 (10)0.0517 (9)−0.0021 (8)−0.0134 (7)0.0040 (8)
N30.0814 (13)0.0564 (10)0.0505 (10)0.0037 (9)−0.0019 (9)−0.0080 (8)
O10.0779 (11)0.0792 (11)0.0725 (11)0.0261 (9)−0.0106 (9)0.0079 (8)
O20.150 (2)0.0794 (12)0.1119 (16)0.0508 (13)−0.0479 (14)−0.0421 (12)
O30.1134 (16)0.0845 (12)0.0754 (12)0.0096 (10)−0.0499 (11)−0.0188 (9)
O40.0763 (11)0.0838 (11)0.0717 (10)0.0233 (9)−0.0195 (8)0.0077 (8)
O5A0.119 (4)0.093 (3)0.100 (4)0.039 (3)0.012 (2)−0.036 (3)
O6A0.159 (6)0.114 (4)0.217 (8)0.052 (4)−0.115 (5)−0.106 (5)
O5B0.107 (5)0.066 (4)0.076 (4)0.025 (3)−0.022 (3)−0.022 (3)
O6B0.144 (6)0.080 (4)0.0251 (16)−0.010 (3)−0.008 (2)−0.0062 (19)
O70.0551 (8)0.0567 (7)0.0399 (6)−0.0104 (6)−0.0098 (5)0.0117 (5)
O80.0708 (10)0.0877 (10)0.0489 (8)−0.0328 (8)−0.0119 (6)0.0194 (7)
C10.0458 (9)0.0473 (9)0.0344 (8)−0.0055 (7)−0.0011 (7)0.0073 (7)
C20.0508 (10)0.0414 (8)0.0390 (8)0.0001 (7)0.0005 (7)0.0060 (7)
C30.0569 (11)0.0440 (9)0.0394 (8)−0.0039 (7)−0.0013 (7)−0.0003 (7)
C40.0469 (10)0.0506 (10)0.0398 (9)−0.0033 (7)−0.0052 (7)0.0049 (7)
C50.0492 (10)0.0487 (9)0.0456 (9)0.0030 (7)0.0019 (7)0.0045 (8)
C60.0532 (10)0.0454 (9)0.0379 (8)−0.0015 (7)0.0037 (7)−0.0008 (7)
C70.0515 (10)0.0521 (9)0.0333 (8)−0.0019 (8)0.0018 (7)0.0028 (7)
C80.0462 (9)0.0497 (9)0.0344 (8)0.0027 (7)0.0012 (7)−0.0005 (7)
C90.0554 (11)0.0614 (11)0.0391 (9)−0.0068 (8)−0.0027 (8)0.0059 (8)
C100.0570 (12)0.0676 (12)0.0465 (10)−0.0103 (9)−0.0055 (8)−0.0004 (9)
C110.0468 (10)0.0723 (12)0.0384 (9)0.0095 (9)−0.0044 (7)−0.0026 (8)
C120.0543 (11)0.0598 (11)0.0396 (9)0.0112 (8)0.0005 (7)0.0073 (8)
C130.0510 (10)0.0497 (9)0.0399 (9)0.0038 (7)0.0019 (7)0.0026 (7)
Cl1—C111.7301 (19)C2—C31.383 (2)
N1—O21.197 (2)C3—C41.373 (3)
N1—O11.201 (2)C3—H30.9300
N1—C21.472 (2)C4—C51.370 (3)
N2—O31.210 (2)C5—C61.377 (3)
N2—O41.213 (2)C5—H50.9300
N2—C41.476 (2)C7—C81.468 (2)
N3—O5A1.149 (5)C8—C91.391 (3)
N3—O6B1.159 (6)C8—C131.396 (2)
N3—O6A1.212 (6)C9—C101.380 (3)
N3—O5B1.269 (7)C9—H90.9300
N3—C61.477 (2)C10—C111.379 (3)
O7—C11.369 (2)C10—H100.9300
O7—C71.380 (2)C11—C121.381 (3)
O8—C71.185 (2)C12—C131.379 (3)
C1—C21.392 (2)C12—H120.9300
C1—C61.395 (3)C13—H130.9300
O2—N1—O1123.13 (18)C4—C5—C6117.85 (17)
O2—N1—C2117.33 (18)C4—C5—H5121.1
O1—N1—C2119.51 (17)C6—C5—H5121.1
O3—N2—O4124.39 (18)C5—C6—C1122.43 (16)
O3—N2—C4117.75 (17)C5—C6—N3116.64 (16)
O4—N2—C4117.86 (17)C1—C6—N3120.93 (17)
O5A—N3—O6B105.7 (5)O8—C7—O7121.40 (16)
O5A—N3—O6A122.7 (4)O8—C7—C8127.36 (16)
O6B—N3—O5B124.2 (5)O7—C7—C8111.19 (15)
O6A—N3—O5B111.3 (5)C9—C8—C13119.90 (17)
O5A—N3—C6118.8 (3)C9—C8—C7122.85 (16)
O6B—N3—C6120.1 (4)C13—C8—C7117.20 (16)
O6A—N3—C6118.5 (3)C10—C9—C8119.82 (18)
O5B—N3—C6115.6 (3)C10—C9—H9120.1
C1—O7—C7117.57 (14)C8—C9—H9120.1
O7—C1—C2123.42 (16)C11—C10—C9119.50 (19)
O7—C1—C6119.22 (16)C11—C10—H10120.2
C2—C1—C6117.23 (16)C9—C10—H10120.2
C3—C2—C1121.39 (16)C10—C11—C12121.54 (17)
C3—C2—N1116.22 (16)C10—C11—Cl1119.54 (16)
C1—C2—N1122.31 (16)C12—C11—Cl1118.91 (15)
C4—C3—C2118.59 (17)C13—C12—C11119.16 (17)
C4—C3—H3120.7C13—C12—H12120.4
C2—C3—H3120.7C11—C12—H12120.4
C5—C4—C3122.47 (17)C12—C13—C8120.06 (18)
C5—C4—N2119.06 (16)C12—C13—H13120.0
C3—C4—N2118.47 (16)C8—C13—H13120.0
C7—O7—C1—C2−74.2 (2)C2—C1—C6—N3178.57 (16)
C7—O7—C1—C6109.99 (18)O5A—N3—C6—C528.5 (4)
O7—C1—C2—C3−175.31 (15)O6B—N3—C6—C5161.0 (5)
C6—C1—C2—C30.5 (2)O6A—N3—C6—C5−152.5 (5)
O7—C1—C2—N11.4 (3)O5B—N3—C6—C5−16.5 (5)
C6—C1—C2—N1177.23 (15)O5A—N3—C6—C1−151.2 (4)
O2—N1—C2—C3−12.3 (3)O6B—N3—C6—C1−18.8 (5)
O1—N1—C2—C3165.66 (18)O6A—N3—C6—C127.7 (6)
O2—N1—C2—C1170.8 (2)O5B—N3—C6—C1163.7 (4)
O1—N1—C2—C1−11.2 (3)C1—O7—C7—O82.2 (3)
C1—C2—C3—C41.1 (3)C1—O7—C7—C8−175.40 (14)
N1—C2—C3—C4−175.83 (16)O8—C7—C8—C9−170.4 (2)
C2—C3—C4—C5−2.1 (3)O7—C7—C8—C96.9 (3)
C2—C3—C4—N2177.22 (16)O8—C7—C8—C137.0 (3)
O3—N2—C4—C5−178.2 (2)O7—C7—C8—C13−175.63 (15)
O4—N2—C4—C52.8 (3)C13—C8—C9—C10−1.1 (3)
O3—N2—C4—C32.4 (3)C7—C8—C9—C10176.21 (17)
O4—N2—C4—C3−176.62 (19)C8—C9—C10—C110.6 (3)
C3—C4—C5—C61.5 (3)C9—C10—C11—C120.2 (3)
N2—C4—C5—C6−177.86 (16)C9—C10—C11—Cl1−178.89 (16)
C4—C5—C6—C10.2 (3)C10—C11—C12—C13−0.5 (3)
C4—C5—C6—N3−179.55 (17)Cl1—C11—C12—C13178.57 (14)
O7—C1—C6—C5174.83 (15)C11—C12—C13—C80.0 (3)
C2—C1—C6—C5−1.2 (3)C9—C8—C13—C120.8 (3)
O7—C1—C6—N3−5.4 (2)C7—C8—C13—C12−176.69 (16)
D—H···AD—HH···AD···AD—H···A
C13—H13···O4i0.932.553.472 (3)174
C5—H5···O8ii0.932.533.457 (2)174
C3—H3···O6Biii0.932.363.188 (5)147
C12—H12···O1iv0.932.513.377 (2)156
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C13—H13⋯O4i 0.932.553.472 (3)174
C5—H5⋯O8ii 0.932.533.457 (2)174
C3—H3⋯O6B iii 0.932.363.188 (5)147
C12—H12⋯O1iv 0.932.513.377 (2)156

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  6 in total

1.  The Cambridge Structural Database: a quarter of a million crystal structures and rising.

Authors:  Frank H Allen
Journal:  Acta Crystallogr B       Date:  2002-05-29

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Graph-set analysis of hydrogen-bond patterns in organic crystals.

Authors:  M C Etter; J C MacDonald; J Bernstein
Journal:  Acta Crystallogr B       Date:  1990-04-01

4.  2,4,6-Trinitro-phenyl 4-methyl-benzoate.

Authors:  Rodolfo Moreno-Fuquen; Fabricio Mosquera; Javier Ellena; Juan C Tenorio; Rodrigo S Corrêa
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-10-13

5.  2,4,6-Trinitro-phenyl benzoate.

Authors:  Rodolfo Moreno-Fuquen; Fabricio Mosquera; Alan R Kennedy; Catriona A Morrison; Regina H De Almeida Santos
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-11-30

6.  2,4,6-Trinitro-phenyl 3-methyl-benzoate.

Authors:  Rodolfo Moreno-Fuquen; Fabricio Mosquera; Javier Ellena; Juan C Tenorio
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-06-23
  6 in total
  2 in total

1.  2,4,6-Tri-nitro-phenyl 3-chloro-benzoate.

Authors:  Rodolfo Moreno-Fuquen; Fabricio Mosquera; Javier Ellena; C A De Simone; Juan C Tenorio
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-05-25

2.  4-Formyl-2-nitro-phenyl 4-bromo-benzoate.

Authors:  Rodolfo Moreno-Fuquen; Geraldine Hernandez; Javier Ellena; Carlos A De Simone; Juan C Tenorio
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-04-27
  2 in total

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