Literature DB >> 23634071

(2E,5E)-2,5-Bis(4-hy-droxy-3-meth-oxy-benzyl-idene)cyclo-penta-none ethanol monosolvate.

Muhammad Da'i1, Arry Yanuar, Edy Meiyanto, Umar Anggara Jenie, Amir Margono Supardjan.   

Abstract

In the title structure, C21H20O5·C2H5OH, the curcumine-type mol-ecule has a double E conformation for the two benzyl-idene double bonds [C=C = 1.342 (4) and 1.349 (4) Å] and is nearly planar with respect to the non-H atoms (r.m.s. deviation from planarity = 0.069 Å). The two phenolic OH groups form bifurcated hydrogen bonds with intra-molecular branches to adjacent meth-oxy O atoms and inter-molecular branches to either a neighbouring mol-ecule or an ethanol solvent mol-ecule. The ethanol O atom donates a hydrogen bond to the keto O atom. These hydrogen bonds link the constituents into layers parallel to (101) in the crystal structure.

Entities:  

Year:  2013        PMID: 23634071      PMCID: PMC3629584          DOI: 10.1107/S1600536813005229

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of curcumin-type compounds, see: Ohori et al. (2006 ▶); Da’i et al. (2007 ▶); Anand et al. (2008 ▶). For the synthesis of the title compound, see: Sardjiman et al. (1997 ▶). For related structures, see: Du et al. (2010 ▶, 2011 ▶).

Experimental

Crystal data

C21H20O5·C2H6O M = 398.45 Monoclinic, a = 8.880 (4) Å b = 17.050 (5) Å c = 13.950 (5) Å β = 103.527 (14)° V = 2053.4 (13) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 296 K 0.12 × 0.10 × 0.06 mm

Data collection

Rigaku R-AXIS RAPID diffractometer Absorption correction: multi-scan (ABSCOR; Rigaku, 1995 ▶) T min = 0.671, T max = 0.994 16083 measured reflections 3720 independent reflections 1748 reflections with I > 2σ(I) R int = 0.119

Refinement

R[F 2 > 2σ(F 2)] = 0.070 wR(F 2) = 0.157 S = 1.00 3720 reflections 268 parameters H-atom parameters constrained Δρmax = 0.14 e Å−3 Δρmin = −0.21 e Å−3 Data collection: RAPID-AUTO (Rigaku, 2006 ▶); cell refinement: RAPID-AUTO; data reduction: RAPID-AUTO; program(s) used to solve structure: SIR2008 (Burla et al., 2007 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: CrystalStructure (Rigaku, 2010 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813005229/qk2050sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813005229/qk2050Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813005229/qk2050Isup3.mol Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813005229/qk2050Isup4.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C21H20O5·C2H6OF(000) = 848.00
Mr = 398.45Dx = 1.289 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71075 Å
Hall symbol: -P 2ynCell parameters from 7488 reflections
a = 8.880 (4) Åθ = 3.0–25.3°
b = 17.050 (5) ŵ = 0.09 mm1
c = 13.950 (5) ÅT = 296 K
β = 103.527 (14)°Block, yellow
V = 2053.4 (13) Å30.12 × 0.10 × 0.06 mm
Z = 4
Rigaku R-AXIS RAPID diffractometer3720 independent reflections
Radiation source: fine-focus sealed tube1748 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.119
ω scansθmax = 25.4°
Absorption correction: multi-scan (ABSCOR; Rigaku, 1995)h = −10→10
Tmin = 0.671, Tmax = 0.994k = −19→20
16083 measured reflectionsl = −16→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.070Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.157H-atom parameters constrained
S = 1.00w = 1/[σ2(Fo2) + (0.0566P)2 + 0.4936P] where P = (Fo2 + 2Fc2)/3
3720 reflections(Δ/σ)max < 0.001
268 parametersΔρmax = 0.14 e Å3
0 restraintsΔρmin = −0.21 e Å3
Refinement. Refinement was performed using all reflections. The weighted R-factor (wR) and goodness of fit (S) are based on F2. R-factor (gt) are based on F. The threshold expression of F2 > 2.0 σ(F2) is used only for calculating R-factor (gt).
xyzUiso*/Ueq
O10.8369 (3)0.06512 (12)0.4353 (2)0.0667 (8)
O20.5966 (3)−0.31177 (12)0.67112 (19)0.0615 (8)
O30.7414 (4)−0.40870 (12)0.5739 (2)0.0710 (8)
H120.6808−0.41760.60880.107*
O40.4611 (3)0.35840 (12)0.73021 (19)0.0604 (8)
O50.5611 (3)0.48579 (11)0.65321 (19)0.0633 (8)
H200.51290.48160.69640.095*
C10.7723 (4)0.05470 (17)0.5029 (3)0.0476 (9)
C20.7402 (4)−0.02157 (17)0.5437 (2)0.0445 (9)
C30.6494 (4)−0.00895 (16)0.6200 (3)0.0486 (9)
H10.7029−0.03180.68240.058*
H20.5480−0.03300.59960.058*
C40.6338 (4)0.08115 (17)0.6307 (3)0.0503 (10)
H30.52560.09630.61740.060*
H40.68450.09800.69670.060*
C50.7110 (4)0.11694 (17)0.5560 (2)0.0437 (9)
C60.7921 (4)−0.08723 (17)0.5092 (3)0.0479 (9)
H50.8498−0.07820.46260.057*
C70.7754 (4)−0.16971 (17)0.5307 (2)0.0444 (9)
C80.6881 (4)−0.19778 (17)0.5944 (2)0.0459 (9)
H60.6365−0.16260.62650.055*
C90.6773 (4)−0.27714 (18)0.6102 (3)0.0467 (9)
C100.7508 (4)−0.33004 (18)0.5607 (3)0.0501 (10)
C110.8375 (5)−0.30373 (18)0.4982 (3)0.0548 (10)
H70.8880−0.33920.46600.066*
C120.8498 (4)−0.22375 (17)0.4831 (3)0.0521 (10)
H80.9088−0.20600.44040.062*
C130.5081 (5)−0.2631 (2)0.7187 (3)0.0695 (12)
H90.4335−0.23470.67030.104*
H100.5753−0.22680.76090.104*
H110.4554−0.29480.75750.104*
C140.7297 (4)0.19233 (17)0.5318 (2)0.0469 (9)
H130.78380.19830.48260.056*
C150.6821 (4)0.26566 (16)0.5675 (2)0.0429 (9)
C160.5905 (4)0.27266 (17)0.6358 (2)0.0441 (9)
H140.55710.22760.66220.053*
C170.5488 (4)0.34504 (18)0.6647 (2)0.0463 (9)
C180.5994 (4)0.41270 (18)0.6257 (3)0.0489 (9)
C190.6884 (5)0.40735 (19)0.5584 (3)0.0588 (11)
H150.72170.45260.53230.071*
C200.7290 (4)0.33428 (18)0.5292 (3)0.0541 (10)
H160.78910.33100.48290.065*
C210.3987 (4)0.29279 (19)0.7699 (3)0.0586 (11)
H170.48150.25990.80440.088*
H180.33340.26360.71750.088*
H190.33890.31050.81490.088*
O60.1141 (4)0.02592 (15)0.7218 (2)0.0752 (9)
H260.1194−0.00160.67460.113*
C220.3617 (9)−0.0071 (4)0.8151 (6)0.172 (3)
H210.45630.01430.85410.257*
H220.3847−0.04130.76570.257*
H230.3098−0.03620.85680.257*
C230.2672 (9)0.0531 (3)0.7700 (5)0.122 (2)
H240.31410.07810.72170.147*
H250.25860.09210.81910.147*
U11U22U33U12U13U23
O10.094 (2)0.0421 (14)0.080 (2)−0.0005 (13)0.0528 (19)−0.0005 (12)
O20.069 (2)0.0486 (14)0.0746 (19)0.0009 (13)0.0332 (16)0.0090 (12)
O30.092 (2)0.0348 (14)0.097 (2)−0.0040 (13)0.0435 (17)0.0012 (12)
O40.079 (2)0.0435 (14)0.0726 (19)−0.0005 (12)0.0454 (17)0.0038 (12)
O50.090 (2)0.0348 (13)0.078 (2)0.0002 (12)0.0455 (17)−0.0016 (11)
C10.052 (3)0.037 (2)0.057 (3)−0.0001 (16)0.019 (2)−0.0001 (17)
C20.043 (2)0.040 (2)0.051 (2)−0.0009 (15)0.013 (2)−0.0001 (16)
C30.056 (3)0.0378 (18)0.053 (2)−0.0033 (16)0.015 (2)0.0043 (15)
C40.061 (3)0.0409 (19)0.054 (2)−0.0044 (17)0.022 (2)−0.0033 (16)
C50.046 (2)0.0357 (19)0.051 (2)−0.0039 (15)0.0140 (19)0.0004 (15)
C60.053 (3)0.043 (2)0.052 (2)0.0002 (17)0.020 (2)0.0017 (16)
C70.049 (3)0.0351 (19)0.050 (2)0.0004 (16)0.012 (2)0.0022 (15)
C80.049 (3)0.040 (2)0.051 (2)0.0038 (16)0.015 (2)0.0010 (16)
C90.049 (3)0.041 (2)0.053 (2)−0.0049 (16)0.017 (2)0.0039 (16)
C100.055 (3)0.036 (2)0.059 (3)−0.0047 (17)0.014 (2)0.0006 (17)
C110.063 (3)0.039 (2)0.067 (3)0.0010 (17)0.026 (2)−0.0100 (17)
C120.061 (3)0.039 (2)0.060 (3)0.0009 (17)0.023 (2)−0.0033 (16)
C130.070 (3)0.078 (3)0.070 (3)0.007 (2)0.034 (3)0.006 (2)
C140.054 (3)0.046 (2)0.044 (2)−0.0016 (17)0.018 (2)−0.0015 (16)
C150.051 (3)0.0325 (18)0.048 (2)−0.0010 (15)0.016 (2)0.0000 (15)
C160.052 (3)0.0359 (19)0.048 (2)−0.0040 (16)0.018 (2)0.0014 (15)
C170.050 (3)0.042 (2)0.049 (2)−0.0051 (16)0.018 (2)−0.0027 (16)
C180.059 (3)0.037 (2)0.054 (2)−0.0043 (17)0.020 (2)−0.0039 (16)
C190.079 (3)0.038 (2)0.071 (3)−0.0042 (19)0.042 (3)0.0082 (18)
C200.072 (3)0.041 (2)0.060 (3)−0.0007 (18)0.037 (2)0.0005 (17)
C210.068 (3)0.058 (2)0.058 (3)−0.0111 (19)0.033 (2)−0.0002 (18)
O60.092 (3)0.0635 (18)0.082 (2)−0.0124 (16)0.0453 (19)−0.0068 (14)
C220.151 (7)0.157 (6)0.201 (8)0.001 (5)0.030 (6)0.041 (6)
C230.158 (7)0.105 (4)0.113 (5)−0.026 (4)0.051 (5)0.003 (4)
O1—C11.226 (4)C11—C121.388 (4)
O2—C91.368 (4)C11—H70.9300
O2—C131.411 (4)C12—H80.9300
O3—C101.359 (4)C13—H90.9600
O3—H120.8200C13—H100.9600
O4—C171.351 (4)C13—H110.9600
O4—C211.417 (4)C14—C151.445 (4)
O5—C181.370 (4)C14—H130.9300
O5—H200.8200C15—C201.390 (4)
C1—C51.469 (4)C15—C161.395 (4)
C1—C21.474 (4)C16—C171.376 (4)
C2—C61.342 (4)C16—H140.9300
C2—C31.493 (4)C17—C181.394 (4)
C3—C41.553 (4)C18—C191.365 (5)
C3—H10.9700C19—C201.385 (4)
C3—H20.9700C19—H150.9300
C4—C51.504 (5)C20—H160.9300
C4—H30.9700C21—H170.9600
C4—H40.9700C21—H180.9600
C5—C141.349 (4)C21—H190.9600
C6—C71.453 (4)O6—C231.445 (7)
C6—H50.9300O6—H260.8200
C7—C121.390 (4)C22—C231.382 (7)
C7—C81.394 (4)C22—H210.9600
C8—C91.378 (4)C22—H220.9600
C8—H60.9300C22—H230.9600
C9—C101.388 (5)C23—H240.9700
C10—C111.366 (5)C23—H250.9700
C9—O2—C13118.0 (3)O2—C13—H9109.5
C10—O3—H12109.5O2—C13—H10109.5
C17—O4—C21118.1 (2)H9—C13—H10109.5
C18—O5—H20109.5O2—C13—H11109.5
O1—C1—C5125.3 (3)H9—C13—H11109.5
O1—C1—C2126.3 (3)H10—C13—H11109.5
C5—C1—C2108.4 (3)C5—C14—C15132.5 (3)
C6—C2—C1118.9 (3)C5—C14—H13113.8
C6—C2—C3131.6 (3)C15—C14—H13113.8
C1—C2—C3109.5 (3)C20—C15—C16117.7 (3)
C2—C3—C4106.6 (3)C20—C15—C14117.2 (3)
C2—C3—H1110.4C16—C15—C14125.0 (3)
C4—C3—H1110.4C17—C16—C15121.2 (3)
C2—C3—H2110.4C17—C16—H14119.4
C4—C3—H2110.4C15—C16—H14119.4
H1—C3—H2108.6O4—C17—C16125.9 (3)
C5—C4—C3105.6 (3)O4—C17—C18114.4 (3)
C5—C4—H3110.6C16—C17—C18119.6 (3)
C3—C4—H3110.6C19—C18—O5118.4 (3)
C5—C4—H4110.6C19—C18—C17120.3 (3)
C3—C4—H4110.6O5—C18—C17121.3 (3)
H3—C4—H4108.7C18—C19—C20119.7 (3)
C14—C5—C1118.7 (3)C18—C19—H15120.2
C14—C5—C4131.5 (3)C20—C19—H15120.2
C1—C5—C4109.8 (3)C19—C20—C15121.5 (3)
C2—C6—C7132.3 (3)C19—C20—H16119.3
C2—C6—H5113.8C15—C20—H16119.3
C7—C6—H5113.8O4—C21—H17109.5
C12—C7—C8118.3 (3)O4—C21—H18109.5
C12—C7—C6117.4 (3)H17—C21—H18109.5
C8—C7—C6124.3 (3)O4—C21—H19109.5
C9—C8—C7120.6 (3)H17—C21—H19109.5
C9—C8—H6119.7H18—C21—H19109.5
C7—C8—H6119.7C23—O6—H26109.5
O2—C9—C8126.1 (3)C23—C22—H21109.5
O2—C9—C10113.8 (3)C23—C22—H22109.5
C8—C9—C10120.1 (3)H21—C22—H22109.5
O3—C10—C11118.2 (3)C23—C22—H23109.5
O3—C10—C9121.5 (3)H21—C22—H23109.5
C11—C10—C9120.3 (3)H22—C22—H23109.5
C10—C11—C12119.7 (3)C22—C23—O6112.2 (5)
C10—C11—H7120.1C22—C23—H24109.2
C12—C11—H7120.1O6—C23—H24109.2
C11—C12—C7121.0 (3)C22—C23—H25109.2
C11—C12—H8119.5O6—C23—H25109.2
C7—C12—H8119.5H24—C23—H25107.9
O1—C1—C2—C63.9 (6)C8—C9—C10—C111.8 (6)
C5—C1—C2—C6−177.1 (3)O3—C10—C11—C12−179.9 (3)
O1—C1—C2—C3−175.8 (4)C9—C10—C11—C12−1.1 (6)
C5—C1—C2—C33.2 (4)C10—C11—C12—C70.1 (6)
C6—C2—C3—C4176.9 (4)C8—C7—C12—C110.1 (5)
C1—C2—C3—C4−3.5 (4)C6—C7—C12—C11−178.9 (3)
C2—C3—C4—C52.5 (4)C1—C5—C14—C15178.7 (4)
O1—C1—C5—C14−2.1 (6)C4—C5—C14—C15−0.6 (7)
C2—C1—C5—C14178.9 (3)C5—C14—C15—C20176.5 (4)
O1—C1—C5—C4177.4 (4)C5—C14—C15—C16−4.7 (6)
C2—C1—C5—C4−1.6 (4)C20—C15—C16—C17−0.4 (5)
C3—C4—C5—C14178.8 (4)C14—C15—C16—C17−179.1 (3)
C3—C4—C5—C1−0.6 (4)C21—O4—C17—C16−3.4 (5)
C1—C2—C6—C7−177.4 (3)C21—O4—C17—C18177.1 (3)
C3—C2—C6—C72.2 (7)C15—C16—C17—O4−179.9 (3)
C2—C6—C7—C12−177.9 (4)C15—C16—C17—C18−0.4 (5)
C2—C6—C7—C83.2 (6)O4—C17—C18—C19−179.8 (3)
C12—C7—C8—C90.6 (5)C16—C17—C18—C190.7 (6)
C6—C7—C8—C9179.5 (3)O4—C17—C18—O50.0 (5)
C13—O2—C9—C83.8 (5)C16—C17—C18—O5−179.6 (3)
C13—O2—C9—C10−175.2 (3)O5—C18—C19—C20180.0 (3)
C7—C8—C9—O2179.5 (3)C17—C18—C19—C20−0.3 (6)
C7—C8—C9—C10−1.6 (5)C18—C19—C20—C15−0.5 (6)
O2—C9—C10—O3−0.4 (5)C16—C15—C20—C190.8 (5)
C8—C9—C10—O3−179.4 (3)C14—C15—C20—C19179.6 (3)
O2—C9—C10—C11−179.1 (3)
D—H···AD—HH···AD···AD—H···A
O3—H12···O20.822.212.653 (4)114
O3—H12···O5i0.822.132.802 (3)139
O5—H20···O40.822.222.666 (3)114
O5—H20···O6ii0.821.932.682 (4)151
O6—H26···O1iii0.821.992.802 (4)172
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O3—H12⋯O20.822.212.653 (4)114
O3—H12⋯O5i 0.822.132.802 (3)139
O5—H20⋯O40.822.222.666 (3)114
O5—H20⋯O6ii 0.821.932.682 (4)151
O6—H26⋯O1iii 0.821.992.802 (4)172

Symmetry codes: (i) ; (ii) ; (iii) .

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