Literature DB >> 23634066

2-(2,6-Dichloro-phen-yl)-N-(1,3-thia-zol-2-yl)acetamide.

Prakash S Nayak1, B Narayana, H S Yathirajan, Jerry P Jasinski, Ray J Butcher.   

Abstract

In the title compound, C11H8Cl2N2OS, the mean plane of the dichloro-phenyl ring is twisted by 79.7 (7)° from that of the thia-zole ring. In the crystal, molecules are linked via pairs of N-H⋯N hydrogen bonds, forming inversion dimers which stack along the a-axis direction.

Entities:  

Year:  2013        PMID: 23634066      PMCID: PMC3629579          DOI: 10.1107/S1600536813006260

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the structural similarity of N-substituted 2-aryl­acetamides to the lateral chain of natural benzyl­penicillin, see: Mijin & Marinkovic (2006 ▶); Mijin et al. (2008 ▶). For the coordination abilities of amides, see: Wu et al. (2008 ▶, 2010 ▶). For related structures, see: Fun et al. (2012a ▶,b ▶,c ▶,d ▶,e ▶); Butcher et al. (2013a ▶,b ▶). For standard bond lengths, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C11H8Cl2N2OS M = 287.15 Triclinic, a = 7.1278 (4) Å b = 8.4434 (4) Å c = 10.3637 (6) Å α = 95.341 (4)° β = 106.140 (5)° γ = 96.745 (4)° V = 589.80 (6) Å3 Z = 2 Mo Kα radiation μ = 0.71 mm−1 T = 123 K 0.3 × 0.2 × 0.1 mm

Data collection

Agilent Xcalibur (Ruby, Gemini) diffractometer Absorption correction: multi-scan (CrysAlis RED; Agilent, 2012 ▶) T min = 0.909, T max = 1.000 10674 measured reflections 5881 independent reflections 4481 reflections with I > 2σ(I) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.096 S = 1.05 5881 reflections 159 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.63 e Å−3 Δρmin = −0.30 e Å−3 Data collection: CrysAlis PRO (Agilent, 2012 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813006260/hg5297sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813006260/hg5297Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813006260/hg5297Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H8Cl2N2OSZ = 2
Mr = 287.15F(000) = 292
Triclinic, P1Dx = 1.617 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.1278 (4) ÅCell parameters from 3814 reflections
b = 8.4434 (4) Åθ = 3.1–37.5°
c = 10.3637 (6) ŵ = 0.71 mm1
α = 95.341 (4)°T = 123 K
β = 106.140 (5)°Prism, colorless
γ = 96.745 (4)°0.3 × 0.2 × 0.1 mm
V = 589.80 (6) Å3
Agilent Xcalibur (Ruby, Gemini) diffractometer5881 independent reflections
Radiation source: Enhance (Mo) X-ray Source4481 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.025
Detector resolution: 10.5081 pixels mm-1θmax = 37.6°, θmin = 3.1°
ω scansh = −12→12
Absorption correction: multi-scan (CrysAlis RED; Agilent, 2012)k = −13→14
Tmin = 0.909, Tmax = 1.000l = −17→8
10674 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.096H atoms treated by a mixture of independent and constrained refinement
S = 1.05w = 1/[σ2(Fo2) + (0.0399P)2 + 0.0356P] where P = (Fo2 + 2Fc2)/3
5881 reflections(Δ/σ)max = 0.001
159 parametersΔρmax = 0.63 e Å3
0 restraintsΔρmin = −0.30 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.07341 (5)0.70227 (3)0.53736 (3)0.01622 (7)
Cl10.33730 (6)0.82751 (4)0.07966 (4)0.02553 (8)
Cl20.41255 (5)0.22491 (3)0.21194 (3)0.02086 (7)
O10.23281 (15)0.51841 (10)0.38090 (10)0.02131 (19)
N10.38161 (16)0.77833 (11)0.43229 (10)0.01460 (18)
H1N0.472 (3)0.854 (2)0.4214 (18)0.033 (5)*
N20.30837 (16)0.97170 (11)0.58210 (10)0.01568 (18)
C10.36862 (17)0.52292 (13)0.13841 (11)0.01338 (19)
C20.29093 (19)0.61876 (14)0.03922 (13)0.0166 (2)
C30.1754 (2)0.55517 (16)−0.09107 (13)0.0203 (2)
H3A0.12660.6242−0.15590.024*
C40.1326 (2)0.38945 (16)−0.12497 (13)0.0203 (2)
H4A0.05320.3444−0.21350.024*
C50.20517 (19)0.28927 (14)−0.03037 (13)0.0183 (2)
H5A0.17570.1757−0.05360.022*
C60.32131 (18)0.35632 (13)0.09860 (12)0.0146 (2)
C70.49054 (18)0.59521 (14)0.28024 (12)0.0154 (2)
H7A0.57050.69800.27680.019*
H7B0.58200.52110.31990.019*
C80.35693 (18)0.62512 (13)0.36893 (12)0.0147 (2)
C90.26992 (17)0.82641 (13)0.51500 (11)0.01340 (19)
C100.1753 (2)0.98851 (14)0.65603 (13)0.0184 (2)
H10A0.17971.08560.71180.022*
C110.0385 (2)0.85772 (14)0.64385 (13)0.0184 (2)
H11B−0.06220.85260.68780.022*
U11U22U33U12U13U23
S10.01826 (14)0.01396 (12)0.01733 (13)−0.00207 (9)0.00928 (11)−0.00039 (10)
Cl10.03479 (19)0.01430 (12)0.03140 (17)0.00564 (11)0.01460 (14)0.00504 (11)
Cl20.02711 (16)0.01518 (12)0.02042 (14)0.00524 (10)0.00606 (12)0.00315 (10)
O10.0265 (5)0.0151 (4)0.0240 (5)−0.0047 (3)0.0152 (4)−0.0035 (3)
N10.0184 (5)0.0107 (4)0.0159 (4)−0.0013 (3)0.0095 (4)−0.0019 (3)
N20.0189 (5)0.0130 (4)0.0161 (4)0.0000 (3)0.0088 (4)−0.0014 (3)
C10.0147 (5)0.0136 (4)0.0131 (5)0.0019 (4)0.0070 (4)−0.0008 (4)
C20.0195 (5)0.0148 (5)0.0193 (5)0.0043 (4)0.0108 (4)0.0030 (4)
C30.0222 (6)0.0264 (6)0.0160 (5)0.0085 (5)0.0089 (5)0.0054 (5)
C40.0175 (6)0.0291 (6)0.0136 (5)0.0053 (5)0.0045 (4)−0.0025 (4)
C50.0182 (5)0.0178 (5)0.0176 (5)0.0020 (4)0.0055 (4)−0.0044 (4)
C60.0157 (5)0.0141 (4)0.0145 (5)0.0027 (4)0.0058 (4)−0.0002 (4)
C70.0160 (5)0.0153 (5)0.0148 (5)−0.0007 (4)0.0068 (4)−0.0029 (4)
C80.0171 (5)0.0136 (4)0.0132 (5)0.0005 (4)0.0057 (4)−0.0014 (4)
C90.0157 (5)0.0124 (4)0.0127 (4)0.0008 (4)0.0060 (4)0.0007 (4)
C100.0230 (6)0.0153 (5)0.0196 (5)0.0024 (4)0.0117 (5)−0.0009 (4)
C110.0200 (6)0.0192 (5)0.0190 (5)0.0018 (4)0.0119 (5)0.0001 (4)
S1—C111.7212 (13)C2—C31.3901 (18)
S1—C91.7306 (11)C3—C41.3867 (19)
Cl1—C21.7436 (12)C3—H3A0.9500
Cl2—C61.7382 (12)C4—C51.3854 (18)
O1—C81.2266 (14)C4—H4A0.9500
N1—C81.3637 (14)C5—C61.3879 (17)
N1—C91.3870 (15)C5—H5A0.9500
N1—H1N0.890 (19)C7—C81.5217 (17)
N2—C91.3114 (14)C7—H7A0.9900
N2—C101.3863 (16)C7—H7B0.9900
C1—C21.4006 (16)C10—C111.3562 (17)
C1—C61.4021 (15)C10—H10A0.9500
C1—C71.5121 (16)C11—H11B0.9500
C11—S1—C988.83 (6)C5—C6—Cl2117.37 (9)
C8—N1—C9123.21 (10)C1—C6—Cl2119.94 (9)
C8—N1—H1N120.7 (12)C1—C7—C8110.36 (10)
C9—N1—H1N116.1 (12)C1—C7—H7A109.6
C9—N2—C10109.52 (10)C8—C7—H7A109.6
C2—C1—C6115.65 (11)C1—C7—H7B109.6
C2—C1—C7121.89 (10)C8—C7—H7B109.6
C6—C1—C7122.43 (10)H7A—C7—H7B108.1
C3—C2—C1122.99 (11)O1—C8—N1122.19 (11)
C3—C2—Cl1117.80 (9)O1—C8—C7121.94 (10)
C1—C2—Cl1119.20 (9)N1—C8—C7115.86 (10)
C4—C3—C2118.98 (11)N2—C9—N1121.19 (10)
C4—C3—H3A120.5N2—C9—S1115.54 (9)
C2—C3—H3A120.5N1—C9—S1123.27 (8)
C5—C4—C3120.31 (12)C11—C10—N2115.85 (11)
C5—C4—H4A119.8C11—C10—H10A122.1
C3—C4—H4A119.8N2—C10—H10A122.1
C4—C5—C6119.38 (11)C10—C11—S1110.26 (9)
C4—C5—H5A120.3C10—C11—H11B124.9
C6—C5—H5A120.3S1—C11—H11B124.9
C5—C6—C1122.69 (11)
C6—C1—C2—C3−0.48 (18)C6—C1—C7—C8−91.89 (13)
C7—C1—C2—C3−178.78 (11)C9—N1—C8—O10.06 (19)
C6—C1—C2—Cl1178.78 (9)C9—N1—C8—C7179.00 (10)
C7—C1—C2—Cl10.48 (16)C1—C7—C8—O153.64 (15)
C1—C2—C3—C40.69 (19)C1—C7—C8—N1−125.30 (11)
Cl1—C2—C3—C4−178.58 (10)C10—N2—C9—N1179.79 (11)
C2—C3—C4—C5−0.38 (19)C10—N2—C9—S1−0.23 (13)
C3—C4—C5—C6−0.09 (19)C8—N1—C9—N2174.79 (11)
C4—C5—C6—C10.30 (19)C8—N1—C9—S1−5.18 (17)
C4—C5—C6—Cl2−178.67 (10)C11—S1—C9—N20.53 (10)
C2—C1—C6—C5−0.02 (17)C11—S1—C9—N1−179.49 (10)
C7—C1—C6—C5178.27 (11)C9—N2—C10—C11−0.31 (16)
C2—C1—C6—Cl2178.92 (9)N2—C10—C11—S10.70 (15)
C7—C1—C6—Cl2−2.79 (16)C9—S1—C11—C10−0.66 (10)
C2—C1—C7—C886.29 (13)
D—H···AD—HH···AD···AD—H···A
N1—H1N···N2i0.890 (19)2.030 (19)2.9165 (14)173.9 (17)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1N⋯N2i 0.890 (19)2.030 (19)2.9165 (14)173.9 (17)

Symmetry code: (i) .

  9 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  2-(2,4-Dichloro-phen-yl)-N-(1,5-dimethyl-3-oxo-2-phenyl-2,3-dihydro-1H-pyrazol-4-yl)acetamide.

Authors:  Ray J Butcher; Aneeka Mahan; P S Nayak; B Narayana; H S Yathirajan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-12-08

3.  Aqua-[N-phenyl-2-(quinolin-8-yl-oxy)acetamide]dinitratozinc(II).

Authors:  Wei-Na Wu; Yuan Wang; Ai-Yun Zhang; Rui-Qi Zhao; Qiu-Fen Wang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-02-13

4.  2,2-Diphenyl-N-(1,3-thia-zol-2-yl)acetamide.

Authors:  Hoong-Kun Fun; Chin Wei Ooi; Prakash S Nayak; B Narayana; B K Sarojini
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-04-06

5.  2-(4-Chloro-phen-yl)-N-(1,3-thia-zol-2-yl)acetamide.

Authors:  Hoong-Kun Fun; Ching Kheng Quah; Prakash S Nayak; B Narayana; B K Sarojini
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-08-11

6.  2-(Naphthalen-1-yl)-N-(1,3-thia-zol-2-yl)acetamide.

Authors:  Hoong-Kun Fun; Ching Kheng Quah; Prakash S Nayak; B Narayana; B K Sarojini
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-07-18

7.  N-(1,3-Thia-zol-2-yl)-2-(2,4,6-trimethyl-phen-yl)acetamide.

Authors:  Hoong-Kun Fun; Ching Kheng Quah; Prakash S Nayak; B Narayana; B K Sarojini
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-07-18

8.  2-(2-Fluoro-phen-yl)-N-(1,3-thia-zol-2-yl)acetamide.

Authors:  Hoong-Kun Fun; Ching Kheng Quah; Prakash S Nayak; B Narayana; B K Sarojini
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-07-28

9.  2-(2,6-Dichloro-phen-yl)-N-(1,5-dimethyl-3-oxo-2-phenyl-2,3-dihydro-1H-pyrazol-4-yl)acetamide.

Authors:  Ray J Butcher; Aneeka Mahan; P S Nayak; B Narayana; H S Yathirajan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-12-08
  9 in total

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