Literature DB >> 23634064

N-Cyclo-hexyl-3-methyl-benzamidine.

Rui-Qin Liu1, Sheng-Di Bai, Tao Wang.   

Abstract

The title amidine compound, C14H20N2, prepared by a one-pot reaction, is asymmetric as only one N atom has an alkyl substituent. The terminal cyclo-hexyl group connected to the amino N atom is located on the other side of the N-C-N skeleton to the 4-methylbenzene ring and has a chair conformation. The dihedral angle between the phenyl ring and the NCN plane is 47.87 (12)°. In the crystal, mol-ecules are linked via N-H⋯N hydrogen bonds, forming chains propagating along the a-axis direction.

Entities:  

Year:  2013        PMID: 23634064      PMCID: PMC3629577          DOI: 10.1107/S1600536813006272

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For reviews of related metal amidinates and their applications in olefin polymerization, see: Edelmann (1994 ▶); Barker & Kilner (1994 ▶); Collins (2011 ▶); Bai et al. (2010 ▶); Yang et al. (2013 ▶). For a review of neutral amidines, see: Coles (2006 ▶). For a related synthetic method for amidines, see: Wang et al. (2008 ▶). For related silyl-linked bis­(amidinate) ligands, see: Bai et al. (2006 ▶).

Experimental

Crystal data

C14H20N2 M = 216.32 Orthorhombic, a = 9.064 (2) Å b = 11.417 (3) Å c = 12.311 (3) Å V = 1274.0 (5) Å3 Z = 4 Mo Kα radiation μ = 0.07 mm−1 T = 200 K 0.30 × 0.25 × 0.20 mm

Data collection

Bruker SMART CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.980, T max = 0.987 7147 measured reflections 2244 independent reflections 1758 reflections with I > 2σ(I) R int = 0.042

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.098 S = 1.02 2244 reflections 154 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.15 e Å−3 Δρmin = −0.12 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813006272/rk2395sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813006272/rk2395Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813006272/rk2395Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H20N2F(000) = 472
Mr = 216.32Dx = 1.128 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 1347 reflections
a = 9.064 (2) Åθ = 2.8–20.0°
b = 11.417 (3) ŵ = 0.07 mm1
c = 12.311 (3) ÅT = 200 K
V = 1274.0 (5) Å3Block, colourless
Z = 40.30 × 0.25 × 0.20 mm
Bruker SMART CCD diffractometer2244 independent reflections
Radiation source: fine–focus sealed tube1758 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.042
φ and ω scanθmax = 25.0°, θmin = 2.4°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −10→7
Tmin = 0.980, Tmax = 0.987k = −13→12
7147 measured reflectionsl = −14→14
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.040H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.098w = 1/[σ2(Fo2) + (0.0452P)2 + 0.0788P] where P = (Fo2 + 2Fc2)/3
S = 1.02(Δ/σ)max < 0.001
2244 reflectionsΔρmax = 0.15 e Å3
154 parametersΔρmin = −0.12 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.020 (3)
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R–factor wR and goodness of fit S are based on F2, conventional R–factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R–factors(gt) etc. and is not relevant to the choice of reflections for refinement. R–factors based on F2 are statistically about twice as large as those based on F, and R–factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.12298 (18)0.22773 (14)0.08238 (13)0.0434 (4)
N2−0.08387 (18)0.17325 (15)−0.02421 (15)0.0475 (5)
C10.1003 (2)0.14588 (16)0.17183 (15)0.0391 (5)
H1B−0.00790.14220.18720.047*
C20.1528 (2)0.02235 (17)0.14538 (16)0.0502 (6)
H2C0.0991−0.00730.08100.060*
H2D0.25930.02400.12770.060*
C30.1267 (3)−0.05956 (17)0.24111 (18)0.0611 (7)
H3A0.0195−0.06560.25530.073*
H3B0.1638−0.13870.22280.073*
C40.2041 (3)−0.0156 (2)0.34235 (18)0.0612 (7)
H4A0.3122−0.01700.33080.073*
H4B0.1809−0.06790.40420.073*
C50.1552 (3)0.10824 (19)0.36872 (17)0.0612 (6)
H5A0.21240.13760.43160.073*
H5B0.04960.10750.38940.073*
C60.1769 (2)0.19043 (17)0.27290 (16)0.0485 (5)
H6A0.13750.26870.29160.058*
H6B0.28370.19890.25810.058*
C70.0332 (2)0.23343 (16)−0.00570 (16)0.0382 (5)
C80.0761 (2)0.32275 (16)−0.08846 (16)0.0387 (5)
C90.1108 (2)0.43699 (16)−0.05829 (17)0.0460 (5)
H9A0.11040.45870.01620.055*
C100.1457 (3)0.51857 (19)−0.13683 (18)0.0559 (6)
H10A0.16830.5967−0.11620.067*
C110.1480 (3)0.48753 (19)−0.24477 (19)0.0578 (6)
H11A0.17240.5446−0.29800.069*
C120.1153 (2)0.37453 (19)−0.27700 (17)0.0520 (6)
C130.0782 (2)0.29362 (17)−0.19718 (16)0.0446 (5)
H13A0.05360.2160−0.21810.054*
C140.1184 (3)0.3393 (2)−0.3945 (2)0.0864 (9)
H14A0.09280.2562−0.40100.130*
H14B0.21740.3523−0.42400.130*
H14C0.04690.3864−0.43520.130*
H2A−0.098 (2)0.1201 (17)0.0303 (17)0.054 (6)*
H1A0.213 (2)0.2603 (17)0.0752 (16)0.052 (6)*
U11U22U33U12U13U23
N10.0400 (10)0.0501 (10)0.0401 (9)−0.0084 (9)−0.0028 (8)0.0139 (8)
N20.0419 (10)0.0512 (10)0.0495 (11)−0.0071 (9)−0.0050 (8)0.0109 (9)
C10.0377 (10)0.0413 (11)0.0384 (11)−0.0025 (9)0.0019 (9)0.0065 (8)
C20.0573 (14)0.0481 (12)0.0451 (13)0.0004 (11)−0.0039 (11)−0.0022 (10)
C30.0705 (17)0.0405 (11)0.0721 (16)−0.0032 (12)−0.0081 (14)0.0079 (12)
C40.0729 (16)0.0571 (14)0.0536 (15)0.0025 (14)−0.0025 (13)0.0189 (11)
C50.0785 (16)0.0640 (15)0.0410 (13)0.0052 (13)−0.0004 (12)0.0068 (11)
C60.0565 (13)0.0438 (11)0.0450 (12)0.0025 (11)−0.0040 (10)−0.0009 (10)
C70.0364 (10)0.0379 (11)0.0402 (12)0.0025 (9)0.0009 (9)0.0016 (9)
C80.0342 (10)0.0392 (11)0.0427 (12)0.0062 (9)−0.0006 (9)0.0042 (9)
C90.0502 (13)0.0430 (11)0.0448 (12)0.0024 (10)−0.0028 (10)0.0033 (10)
C100.0701 (16)0.0387 (11)0.0590 (15)−0.0026 (11)−0.0040 (12)0.0082 (11)
C110.0638 (16)0.0524 (13)0.0570 (15)−0.0022 (12)0.0016 (12)0.0212 (12)
C120.0552 (14)0.0590 (13)0.0418 (13)0.0052 (12)0.0000 (11)0.0089 (11)
C130.0460 (12)0.0448 (11)0.0431 (12)0.0012 (10)−0.0011 (9)0.0006 (10)
C140.123 (2)0.0921 (19)0.0440 (14)−0.0059 (19)0.0068 (16)0.0102 (14)
N1—C71.357 (2)C5—H5B0.9900
N1—C11.459 (2)C6—H6A0.9900
N1—H1A0.90 (2)C6—H6B0.9900
N2—C71.284 (2)C7—C81.493 (3)
N2—H2A0.91 (2)C8—C131.379 (3)
C1—C61.513 (3)C8—C91.392 (3)
C1—C21.524 (3)C9—C101.379 (3)
C1—H1B1.0000C9—H9A0.9500
C2—C31.523 (3)C10—C111.375 (3)
C2—H2C0.9900C10—H10A0.9500
C2—H2D0.9900C11—C121.382 (3)
C3—C41.516 (3)C11—H11A0.9500
C3—H3A0.9900C12—C131.390 (3)
C3—H3B0.9900C12—C141.502 (3)
C4—C51.517 (3)C13—H13A0.9500
C4—H4A0.9900C14—H14A0.9800
C4—H4B0.9900C14—H14B0.9800
C5—C61.520 (3)C14—H14C0.9800
C5—H5A0.9900
C7—N1—C1123.32 (16)C1—C6—C5111.80 (17)
C7—N1—H1A116.5 (13)C1—C6—H6A109.3
C1—N1—H1A117.7 (13)C5—C6—H6A109.3
C7—N2—H2A110.1 (13)C1—C6—H6B109.3
N1—C1—C6109.93 (15)C5—C6—H6B109.3
N1—C1—C2112.82 (15)H6A—C6—H6B107.9
C6—C1—C2110.11 (16)N2—C7—N1127.70 (18)
N1—C1—H1B107.9N2—C7—C8117.35 (18)
C6—C1—H1B107.9N1—C7—C8114.94 (16)
C2—C1—H1B107.9C13—C8—C9118.79 (18)
C3—C2—C1110.77 (16)C13—C8—C7120.08 (17)
C3—C2—H2C109.5C9—C8—C7121.12 (18)
C1—C2—H2C109.5C10—C9—C8119.8 (2)
C3—C2—H2D109.5C10—C9—H9A120.1
C1—C2—H2D109.5C8—C9—H9A120.1
H2C—C2—H2D108.1C11—C10—C9120.4 (2)
C4—C3—C2111.18 (18)C11—C10—H10A119.8
C4—C3—H3A109.4C9—C10—H10A119.8
C2—C3—H3A109.4C10—C11—C12121.0 (2)
C4—C3—H3B109.4C10—C11—H11A119.5
C2—C3—H3B109.4C12—C11—H11A119.5
H3A—C3—H3B108.0C11—C12—C13118.0 (2)
C3—C4—C5110.44 (19)C11—C12—C14121.5 (2)
C3—C4—H4A109.6C13—C12—C14120.5 (2)
C5—C4—H4A109.6C8—C13—C12121.95 (19)
C3—C4—H4B109.6C8—C13—H13A119.0
C5—C4—H4B109.6C12—C13—H13A119.0
H4A—C4—H4B108.1C12—C14—H14A109.5
C4—C5—C6111.80 (18)C12—C14—H14B109.5
C4—C5—H5A109.3H14A—C14—H14B109.5
C6—C5—H5A109.3C12—C14—H14C109.5
C4—C5—H5B109.3H14A—C14—H14C109.5
C6—C5—H5B109.3H14B—C14—H14C109.5
H5A—C5—H5B107.9
D—H···AD—HH···AD···AD—H···A
N1—H1A···N2i0.90 (2)2.08 (2)2.975 (2)168.0 (18)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1A⋯N2i 0.90 (2)2.08 (2)2.975 (2)168.0 (18)

Symmetry code: (i) .

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