Literature DB >> 23634053

2-(2-Chloro-phen-yl)-N-cyclo-hexyl-2-oxoacetamide.

Xiu-Dan Jin1, Jin-Long Wu.   

Abstract

In the title compound, C14H16ClNO2, the cyclo-hexyl ring has a chair conformation. The dihedral angle between the benzene ring and the mean plane of the four planar C atoms of the cyclo-hexyl ring is 45.2 (3)°. The two carbonyl groups are trans to one another, with an O=C-C=O torsion angle of -137.1 (3)°. In the crystal, mol-ecules are linked by N-H⋯O hydrogen bonds forming chains propagating along [001]. A region of disordered electron density, situated near the unit-cell corners, was treated using the SQUEEZE routine in PLATON [Spek (2009 ▶). Acta Cryst. D65, 148-155]. It gave a solvent-accessible void of ca 400 Å(3) for only 21 electrons. It is probably due to traces of the solvent of crystallization and was not taken into account during structure refinement.

Entities:  

Year:  2013        PMID: 23634053      PMCID: PMC3629535          DOI: 10.1107/S1600536813005904

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structures of substituted phenyl­glyoxamides, see: Boryczka et al. (1998 ▶); Dai & Wu (2011 ▶); Jia & Wu (2012 ▶).

Experimental

Crystal data

C14H16ClNO2 M = 265.73 Hexagonal, a = 17.075 (3) Å c = 9.4536 (13) Å V = 2387.0 (7) Å3 Z = 6 Mo Kα radiation μ = 0.24 mm−1 T = 293 K 0.48 × 0.26 × 0.20 mm

Data collection

Agilent Xcalibur (Atlas, Gemini ultra) diffractometer Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011 ▶) T min = 0.896, T max = 0.955 15794 measured reflections 3101 independent reflections 2344 reflections with I > 2σ(I) R int = 0.047

Refinement

R[F 2 > 2σ(F 2)] = 0.051 wR(F 2) = 0.149 S = 1.01 3101 reflections 163 parameters 1 restraint H-atom parameters constrained Δρmax = 0.19 e Å−3 Δρmin = −0.17 e Å−3 Absolute structure: Flack (1983 ▶), 1422 Friedel pairs Flack parameter: −0.05 (3) Data collection: CrysAlis PRO (Agilent, 2011 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: OLEX2 (Dolomanov et al., 2009 ▶); software used to prepare material for publication: OLEX2. Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813005904/su2558sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813005904/su2558Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813005904/su2558Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H16ClNO2Dx = 1.109 Mg m3
Mr = 265.73Mo Kα radiation, λ = 0.71073 Å
Hexagonal, P61Cell parameters from 2933 reflections
Hall symbol: P 61θ = 3.2–29.4°
a = 17.075 (3) ŵ = 0.24 mm1
c = 9.4536 (13) ÅT = 293 K
V = 2387.0 (7) Å3Needle, colourless
Z = 60.48 × 0.26 × 0.20 mm
F(000) = 840
Agilent Xcalibur (Atlas, Gemini ultra) diffractometer3101 independent reflections
Radiation source: fine-focus sealed tube2344 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.047
Detector resolution: 10.3592 pixels mm-1θmax = 26.1°, θmin = 3.2°
ω scansh = −16→21
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011)k = −21→19
Tmin = 0.896, Tmax = 0.955l = −11→11
15794 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.051H-atom parameters constrained
wR(F2) = 0.149w = 1/[σ2(Fo2) + (0.0919P)2] where P = (Fo2 + 2Fc2)/3
S = 1.01(Δ/σ)max < 0.001
3101 reflectionsΔρmax = 0.19 e Å3
163 parametersΔρmin = −0.17 e Å3
1 restraintAbsolute structure: Flack (1983), 1422 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: −0.05 (3)
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell esds are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.69837 (7)0.67833 (8)0.10734 (15)0.1067 (4)
O10.43847 (15)0.60191 (15)0.0815 (2)0.0736 (8)
O20.52877 (16)0.55421 (14)0.3612 (2)0.0672 (8)
N10.48258 (16)0.46907 (14)0.1620 (2)0.0538 (8)
C10.6611 (2)0.7465 (2)0.1859 (4)0.0703 (11)
C20.7225 (3)0.8325 (3)0.2271 (6)0.1002 (16)
C30.6930 (4)0.8869 (3)0.2830 (6)0.1072 (18)
C40.6038 (3)0.8566 (2)0.2982 (5)0.0948 (16)
C50.5408 (2)0.7700 (2)0.2549 (4)0.0705 (11)
C60.5693 (2)0.71274 (18)0.2003 (3)0.0539 (9)
C70.5009 (2)0.61862 (19)0.1599 (3)0.0508 (9)
C80.50637 (18)0.54310 (18)0.2353 (3)0.0481 (8)
C90.4826 (2)0.38896 (18)0.2192 (3)0.0541 (9)
C100.5628 (2)0.3843 (2)0.1677 (4)0.0786 (14)
C110.5633 (3)0.3014 (3)0.2262 (5)0.0919 (17)
C120.4763 (3)0.2157 (2)0.1922 (4)0.0913 (16)
C130.3966 (3)0.2207 (3)0.2424 (7)0.112 (2)
C140.3952 (2)0.3033 (2)0.1816 (6)0.0897 (14)
H10.466100.467400.075500.0650*
H20.784100.853800.217200.1210*
H30.734800.945500.310800.1280*
H40.584500.894000.337800.1140*
H50.479300.750200.262300.0840*
H90.486400.394300.322500.0650*
H10A0.617600.438500.196600.0940*
H10B0.561800.382000.065100.0940*
H11A0.613800.298000.185900.1100*
H11B0.571500.307200.327900.1100*
H12A0.471900.205900.090700.1100*
H12B0.476800.164800.236700.1100*
H13A0.397700.224000.344900.1350*
H13B0.341800.166200.214600.1350*
H14A0.388600.297800.079600.1080*
H14B0.344100.306400.219800.1080*
U11U22U33U12U13U23
Cl10.0872 (6)0.1113 (7)0.1394 (9)0.0629 (6)0.0331 (6)−0.0112 (7)
O10.0885 (15)0.0802 (14)0.0662 (14)0.0527 (12)−0.0205 (12)−0.0011 (11)
O20.1098 (16)0.0723 (12)0.0345 (11)0.0567 (12)−0.0018 (10)−0.0010 (9)
N10.0815 (16)0.0613 (13)0.0317 (11)0.0455 (13)−0.0049 (10)0.0001 (10)
C10.078 (2)0.0719 (19)0.0720 (19)0.0458 (17)0.0126 (16)0.0028 (16)
C20.071 (2)0.080 (2)0.134 (4)0.026 (2)0.012 (2)0.000 (2)
C30.118 (3)0.059 (2)0.131 (4)0.034 (2)0.011 (3)−0.005 (2)
C40.125 (3)0.065 (2)0.107 (3)0.057 (2)0.017 (3)−0.002 (2)
C50.085 (2)0.0680 (19)0.075 (2)0.0507 (17)0.0183 (18)0.0131 (17)
C60.0733 (18)0.0610 (16)0.0410 (15)0.0437 (15)0.0088 (12)0.0106 (12)
C70.0668 (16)0.0663 (16)0.0346 (13)0.0448 (14)0.0051 (12)0.0015 (11)
C80.0634 (15)0.0629 (15)0.0294 (14)0.0402 (13)0.0065 (11)0.0036 (11)
C90.0799 (18)0.0569 (15)0.0362 (13)0.0422 (14)0.0037 (12)0.0053 (11)
C100.073 (2)0.073 (2)0.101 (3)0.0449 (17)0.0086 (18)0.0180 (19)
C110.100 (3)0.095 (3)0.109 (3)0.070 (2)0.008 (2)0.019 (2)
C120.145 (4)0.070 (2)0.078 (2)0.068 (2)−0.015 (2)−0.0055 (19)
C130.096 (3)0.064 (2)0.161 (5)0.028 (2)0.001 (3)0.040 (3)
C140.072 (2)0.068 (2)0.128 (3)0.0342 (18)0.003 (2)0.026 (2)
Cl1—C11.747 (4)C12—C131.484 (8)
O1—C71.210 (4)C13—C141.534 (6)
O2—C81.235 (3)C2—H20.9300
N1—C81.315 (3)C3—H30.9300
N1—C91.471 (4)C4—H40.9300
N1—H10.8600C5—H50.9300
C1—C61.380 (5)C9—H90.9800
C1—C21.367 (6)C10—H10A0.9700
C2—C31.365 (8)C10—H10B0.9700
C3—C41.349 (9)C11—H11A0.9700
C4—C51.386 (5)C11—H11B0.9700
C5—C61.391 (5)C12—H12A0.9700
C6—C71.489 (4)C12—H12B0.9700
C7—C81.517 (4)C13—H13A0.9700
C9—C141.520 (5)C13—H13B0.9700
C9—C101.493 (5)C14—H14A0.9700
C10—C111.524 (6)C14—H14B0.9700
C11—C121.509 (6)
C8—N1—C9123.8 (2)C5—C4—H4120.00
C9—N1—H1118.00C4—C5—H5120.00
C8—N1—H1118.00C6—C5—H5120.00
Cl1—C1—C6118.7 (2)N1—C9—H9108.00
Cl1—C1—C2119.9 (3)C10—C9—H9108.00
C2—C1—C6121.4 (4)C14—C9—H9108.00
C1—C2—C3119.7 (5)C9—C10—H10A109.00
C2—C3—C4120.7 (4)C9—C10—H10B109.00
C3—C4—C5120.2 (4)C11—C10—H10A109.00
C4—C5—C6120.1 (4)C11—C10—H10B109.00
C1—C6—C7122.7 (3)H10A—C10—H10B108.00
C1—C6—C5117.8 (3)C10—C11—H11A109.00
C5—C6—C7119.5 (3)C10—C11—H11B109.00
C6—C7—C8116.7 (3)C12—C11—H11A109.00
O1—C7—C8120.6 (3)C12—C11—H11B109.00
O1—C7—C6122.4 (3)H11A—C11—H11B108.00
O2—C8—N1125.3 (3)C11—C12—H12A109.00
O2—C8—C7117.9 (2)C11—C12—H12B109.00
N1—C8—C7116.7 (2)C13—C12—H12A109.00
N1—C9—C10110.9 (2)C13—C12—H12B109.00
C10—C9—C14111.0 (3)H12A—C12—H12B108.00
N1—C9—C14110.6 (3)C12—C13—H13A109.00
C9—C10—C11111.3 (3)C12—C13—H13B109.00
C10—C11—C12111.3 (4)C14—C13—H13A109.00
C11—C12—C13111.3 (4)C14—C13—H13B109.00
C12—C13—C14111.7 (4)H13A—C13—H13B108.00
C9—C14—C13109.8 (4)C9—C14—H14A110.00
C1—C2—H2120.00C9—C14—H14B110.00
C3—C2—H2120.00C13—C14—H14A110.00
C2—C3—H3120.00C13—C14—H14B110.00
C4—C3—H3120.00H14A—C14—H14B108.00
C3—C4—H4120.00
C8—N1—C9—C14133.5 (4)C1—C6—C7—C859.6 (4)
C9—N1—C8—O2−2.4 (5)C5—C6—C7—O152.5 (4)
C9—N1—C8—C7−179.1 (3)C5—C6—C7—C8−120.4 (3)
C8—N1—C9—C10−103.0 (3)O1—C7—C8—N139.9 (5)
C6—C1—C2—C3−0.4 (7)C6—C7—C8—O236.0 (4)
Cl1—C1—C6—C5−176.0 (3)C6—C7—C8—N1−147.0 (3)
Cl1—C1—C6—C73.9 (4)O1—C7—C8—O2−137.1 (3)
Cl1—C1—C2—C3177.3 (4)N1—C9—C10—C11−179.9 (3)
C2—C1—C6—C51.7 (6)C14—C9—C10—C11−56.5 (4)
C2—C1—C6—C7−178.4 (4)N1—C9—C14—C13−179.9 (4)
C1—C2—C3—C40.1 (8)C10—C9—C14—C1356.6 (5)
C2—C3—C4—C5−1.1 (8)C9—C10—C11—C1255.2 (4)
C3—C4—C5—C62.4 (6)C10—C11—C12—C13−54.8 (5)
C4—C5—C6—C7177.4 (3)C11—C12—C13—C1455.9 (6)
C4—C5—C6—C1−2.6 (5)C12—C13—C14—C9−56.5 (6)
C1—C6—C7—O1−127.4 (4)
D—H···AD—HH···AD···AD—H···A
N1—H1···O2i0.862.072.864 (3)153
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1⋯O2i 0.862.072.864 (3)153

Symmetry code: (i) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  2-(2-Chloro-phen-yl)-2-oxo-N-phenyl-acetamide.

Authors:  Jing Dai; Jin-Long Wu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-02

3.  N-Cyclo-hexyl-2-oxo-2-phenyl-acetamide.

Authors:  Ze-Jun Jia; Jin-Long Wu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-05-31

4.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  4 in total

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