Literature DB >> 23634035

2-Amino-4-(4-bromo-phen-yl)-6-meth-oxy-4H-benzo[h]chromene-3-carbonitrile.

Al-Anood M Al-Dies1, Ahmed M El-Agrody, Mohamed A Al-Omar, Abd El-Galil E Amr, Seik Weng Ng, Edward R T Tiekink.   

Abstract

In the title compound, C21H15BrN2O2, the 14 non-H atoms of the 4H-benzo[h]chromene fused-ring system are approximately coplanar (r.m.s. deviation = 0.129 Å). Within this system, the 4H-pyran ring adopts a flattened half-chair conformation with the methine C atom lying 0.281 (4) Å above the plane of the remaining atoms (r.m.s. deviation = 0.0446 Å). The bromo-benzene ring is almost perpendicular to the fused-ring system [dihedral angle = 85.34 (13)°]. In the crystal, supra-molecular layers parallel to (101) are sustained by amine-cyano N-H⋯N and amine-meth-oxy N-H⋯O hydrogen bonds. The layers stack with inter-actions of the type (bromo-benzene)C-H⋯π(outer-C6 ring of the fused-ring system) connecting them.

Entities:  

Year:  2013        PMID: 23634035      PMCID: PMC3629517          DOI: 10.1107/S1600536813005461

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to biologically active mol­ecules having the 4H-chromene or 4H-benzochromene residue, see: Sabry et al. (2011 ▶); Amin et al. (2010 ▶); Kidwai et al. (2010 ▶); Singh et al. (2010 ▶), For the structure of the fluoro derivative, see: Al-Dies et al. (2012 ▶).

Experimental

Crystal data

C21H15BrN2O2 M = 407.26 Monoclinic, a = 6.0823 (7) Å b = 16.6918 (18) Å c = 17.7700 (16) Å β = 93.646 (9)° V = 1800.4 (3) Å3 Z = 4 Mo Kα radiation μ = 2.30 mm−1 T = 295 K 0.30 × 0.10 × 0.10 mm

Data collection

Agilent SuperNova Dual diffractometer with an Atlas detector Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011 ▶) T min = 0.694, T max = 1.000 8976 measured reflections 4144 independent reflections 2250 reflections with I > 2σ(I) R int = 0.041

Refinement

R[F 2 > 2σ(F 2)] = 0.053 wR(F 2) = 0.150 S = 1.03 4144 reflections 243 parameters 2 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.71 e Å−3 Δρmin = −0.78 e Å−3 Data collection: CrysAlis PRO (Agilent, 2011 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813005461/hb7048sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813005461/hb7048Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813005461/hb7048Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C21H15BrN2O2F(000) = 824
Mr = 407.26Dx = 1.502 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 1634 reflections
a = 6.0823 (7) Åθ = 3.4–27.5°
b = 16.6918 (18) ŵ = 2.30 mm1
c = 17.7700 (16) ÅT = 295 K
β = 93.646 (9)°Prism, yellow
V = 1800.4 (3) Å30.30 × 0.10 × 0.10 mm
Z = 4
Agilent SuperNova Dual diffractometer with an Atlas detector4144 independent reflections
Radiation source: SuperNova (Mo) X-ray Source2250 reflections with I > 2σ(I)
Mirror monochromatorRint = 0.041
Detector resolution: 10.4041 pixels mm-1θmax = 27.6°, θmin = 3.4°
ω scanh = −7→7
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011)k = −15→21
Tmin = 0.694, Tmax = 1.000l = −22→23
8976 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.053Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.150H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.057P)2 + 0.4428P] where P = (Fo2 + 2Fc2)/3
4144 reflections(Δ/σ)max < 0.001
243 parametersΔρmax = 0.71 e Å3
2 restraintsΔρmin = −0.78 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br10.16537 (9)0.98612 (4)0.33868 (3)0.0969 (3)
O10.0181 (4)0.64654 (15)0.64437 (13)0.0504 (6)
O20.1773 (4)0.92192 (15)0.81237 (13)0.0573 (7)
N10.1307 (6)0.5382 (2)0.5848 (2)0.0582 (8)
H10.207 (7)0.513 (3)0.552 (2)0.093 (17)*
H20.008 (4)0.517 (3)0.598 (3)0.089 (17)*
N20.6286 (6)0.5888 (2)0.50299 (19)0.0676 (9)
C10.0644 (5)0.7191 (2)0.68158 (16)0.0393 (8)
C2−0.0802 (5)0.73721 (19)0.73914 (16)0.0375 (7)
C3−0.2638 (6)0.6894 (2)0.75334 (18)0.0453 (8)
H3−0.29310.64370.72460.054*
C4−0.3989 (6)0.7094 (2)0.80851 (19)0.0520 (9)
H4−0.52250.67830.81600.062*
C5−0.3531 (6)0.7762 (2)0.8539 (2)0.0547 (10)
H5−0.44460.78870.89220.066*
C6−0.1753 (6)0.8235 (2)0.84260 (18)0.0500 (9)
H6−0.14470.86720.87410.060*
C7−0.0360 (5)0.8068 (2)0.78307 (17)0.0405 (8)
C80.1447 (6)0.8565 (2)0.76620 (17)0.0430 (8)
C90.2710 (5)0.8382 (2)0.70790 (18)0.0446 (8)
H90.38470.87250.69640.054*
C100.2321 (5)0.7680 (2)0.66466 (16)0.0390 (7)
C110.3774 (5)0.7476 (2)0.60075 (17)0.0411 (8)
H110.53110.75560.61920.049*
C120.3481 (5)0.6601 (2)0.58086 (17)0.0419 (8)
C130.1747 (6)0.6157 (2)0.60137 (18)0.0455 (8)
C140.3613 (7)0.9720 (2)0.8004 (2)0.0635 (11)
H14A0.36201.01660.83450.095*
H14B0.35090.99130.74940.095*
H14C0.49490.94190.80920.095*
C150.5037 (6)0.6215 (2)0.53744 (19)0.0479 (9)
C160.3287 (5)0.8045 (2)0.53448 (17)0.0409 (8)
C170.1278 (6)0.8030 (3)0.4940 (2)0.0577 (10)
H170.02320.76510.50580.069*
C180.0789 (6)0.8566 (3)0.4364 (2)0.0627 (11)
H18−0.05800.85510.41000.075*
C190.2331 (7)0.9121 (2)0.41810 (19)0.0549 (10)
C200.4365 (6)0.9136 (2)0.4556 (2)0.0581 (10)
H200.54210.95040.44230.070*
C210.4832 (6)0.8596 (2)0.51378 (19)0.0505 (9)
H210.62140.86060.53940.061*
U11U22U33U12U13U23
Br10.1155 (5)0.0841 (4)0.0888 (4)−0.0019 (3)−0.0114 (3)0.0431 (3)
O10.0523 (13)0.0429 (15)0.0572 (13)−0.0032 (11)0.0139 (11)−0.0239 (12)
O20.0760 (17)0.0383 (15)0.0578 (14)−0.0057 (13)0.0074 (12)−0.0170 (12)
N10.063 (2)0.0407 (19)0.073 (2)−0.0020 (17)0.0213 (18)−0.0202 (17)
N20.079 (2)0.054 (2)0.073 (2)0.0104 (19)0.0324 (18)0.0012 (18)
C10.0484 (19)0.0320 (18)0.0372 (16)0.0036 (15)0.0016 (15)−0.0055 (14)
C20.0478 (18)0.0313 (17)0.0333 (15)0.0080 (15)0.0011 (14)−0.0027 (14)
C30.056 (2)0.0330 (19)0.0466 (19)0.0026 (16)0.0040 (16)0.0014 (16)
C40.056 (2)0.049 (2)0.053 (2)0.0027 (18)0.0115 (18)0.0047 (18)
C50.066 (2)0.050 (2)0.050 (2)0.008 (2)0.0177 (18)−0.0008 (18)
C60.070 (2)0.039 (2)0.0417 (18)0.0098 (19)0.0078 (17)−0.0074 (16)
C70.0516 (19)0.0335 (18)0.0361 (16)0.0076 (16)−0.0003 (15)0.0001 (14)
C80.057 (2)0.0304 (18)0.0404 (17)0.0094 (16)−0.0021 (16)−0.0060 (15)
C90.0510 (19)0.0344 (19)0.0482 (19)0.0006 (16)0.0011 (16)−0.0017 (15)
C100.0486 (18)0.0333 (18)0.0353 (16)0.0043 (16)0.0041 (14)−0.0009 (14)
C110.0445 (18)0.040 (2)0.0390 (17)0.0029 (16)0.0023 (14)−0.0008 (15)
C120.0511 (19)0.0356 (19)0.0397 (17)0.0065 (16)0.0087 (15)0.0006 (15)
C130.056 (2)0.041 (2)0.0400 (17)0.0097 (18)0.0032 (16)−0.0114 (16)
C140.066 (2)0.041 (2)0.083 (3)−0.005 (2)0.000 (2)−0.016 (2)
C150.063 (2)0.037 (2)0.0444 (18)0.0100 (18)0.0124 (17)0.0034 (16)
C160.0457 (18)0.0371 (19)0.0399 (17)0.0018 (16)0.0032 (15)−0.0047 (15)
C170.052 (2)0.062 (3)0.059 (2)−0.0083 (19)−0.0018 (18)0.013 (2)
C180.057 (2)0.071 (3)0.059 (2)−0.005 (2)−0.0058 (19)0.015 (2)
C190.076 (3)0.043 (2)0.0458 (19)0.004 (2)−0.0022 (19)0.0060 (17)
C200.066 (2)0.047 (2)0.062 (2)−0.014 (2)0.008 (2)0.0042 (19)
C210.051 (2)0.047 (2)0.053 (2)−0.0032 (18)−0.0037 (17)−0.0006 (18)
Br1—C191.901 (3)C8—C91.363 (5)
O1—C131.360 (4)C9—C101.413 (4)
O1—C11.399 (4)C9—H90.9300
O2—C81.372 (4)C10—C111.521 (4)
O2—C141.423 (5)C11—C121.510 (5)
N1—C131.349 (5)C11—C161.528 (4)
N1—H10.877 (10)C11—H110.9800
N1—H20.874 (10)C12—C131.357 (5)
N2—C151.144 (4)C12—C151.414 (5)
C1—C101.355 (5)C14—H14A0.9600
C1—C21.423 (4)C14—H14B0.9600
C2—C31.408 (5)C14—H14C0.9600
C2—C71.416 (4)C16—C171.378 (5)
C3—C41.360 (5)C16—C211.382 (5)
C3—H30.9300C17—C181.378 (5)
C4—C51.395 (5)C17—H170.9300
C4—H40.9300C18—C191.372 (5)
C5—C61.364 (5)C18—H180.9300
C5—H50.9300C19—C201.368 (5)
C6—C71.424 (5)C20—C211.387 (5)
C6—H60.9300C20—H200.9300
C7—C81.424 (5)C21—H210.9300
C13—O1—C1117.8 (3)C12—C11—C16114.0 (3)
C8—O2—C14117.6 (3)C10—C11—C16110.1 (3)
C13—N1—H1120 (3)C12—C11—H11107.8
C13—N1—H2120 (3)C10—C11—H11107.8
H1—N1—H2118 (5)C16—C11—H11107.8
C10—C1—O1123.2 (3)C13—C12—C15117.1 (3)
C10—C1—C2122.6 (3)C13—C12—C11123.2 (3)
O1—C1—C2114.1 (3)C15—C12—C11119.7 (3)
C3—C2—C7119.4 (3)N1—C13—C12127.7 (3)
C3—C2—C1122.8 (3)N1—C13—O1110.5 (3)
C7—C2—C1117.8 (3)C12—C13—O1121.9 (3)
C4—C3—C2120.9 (3)O2—C14—H14A109.5
C4—C3—H3119.6O2—C14—H14B109.5
C2—C3—H3119.6H14A—C14—H14B109.5
C3—C4—C5120.3 (4)O2—C14—H14C109.5
C3—C4—H4119.8H14A—C14—H14C109.5
C5—C4—H4119.8H14B—C14—H14C109.5
C6—C5—C4120.6 (3)N2—C15—C12178.6 (4)
C6—C5—H5119.7C17—C16—C21117.9 (3)
C4—C5—H5119.7C17—C16—C11120.8 (3)
C5—C6—C7120.7 (3)C21—C16—C11121.2 (3)
C5—C6—H6119.7C18—C17—C16121.2 (4)
C7—C6—H6119.7C18—C17—H17119.4
C2—C7—C8119.0 (3)C16—C17—H17119.4
C2—C7—C6118.0 (3)C19—C18—C17119.8 (3)
C8—C7—C6123.1 (3)C19—C18—H18120.1
C9—C8—O2124.5 (3)C17—C18—H18120.1
C9—C8—C7120.6 (3)C20—C19—C18120.5 (3)
O2—C8—C7114.9 (3)C20—C19—Br1119.7 (3)
C8—C9—C10121.1 (3)C18—C19—Br1119.7 (3)
C8—C9—H9119.5C19—C20—C21119.1 (4)
C10—C9—H9119.5C19—C20—H20120.4
C1—C10—C9118.8 (3)C21—C20—H20120.4
C1—C10—C11120.8 (3)C16—C21—C20121.4 (3)
C9—C10—C11120.4 (3)C16—C21—H21119.3
C12—C11—C10109.0 (3)C20—C21—H21119.3
C13—O1—C1—C1014.6 (4)C8—C9—C10—C11−178.8 (3)
C13—O1—C1—C2−165.3 (3)C1—C10—C11—C12−17.0 (4)
C10—C1—C2—C3175.4 (3)C9—C10—C11—C12162.5 (3)
O1—C1—C2—C3−4.7 (4)C1—C10—C11—C16108.7 (3)
C10—C1—C2—C7−4.1 (4)C9—C10—C11—C16−71.8 (4)
O1—C1—C2—C7175.8 (3)C10—C11—C12—C1317.6 (4)
C7—C2—C3—C40.1 (5)C16—C11—C12—C13−105.8 (3)
C1—C2—C3—C4−179.4 (3)C10—C11—C12—C15−163.8 (3)
C2—C3—C4—C5−2.3 (5)C16—C11—C12—C1572.8 (4)
C3—C4—C5—C61.5 (5)C15—C12—C13—N1−0.6 (5)
C4—C5—C6—C71.6 (5)C11—C12—C13—N1178.1 (3)
C3—C2—C7—C8−177.4 (3)C15—C12—C13—O1178.7 (3)
C1—C2—C7—C82.1 (4)C11—C12—C13—O1−2.7 (5)
C3—C2—C7—C62.8 (4)C1—O1—C13—N1165.0 (3)
C1—C2—C7—C6−177.7 (3)C1—O1—C13—C12−14.4 (4)
C5—C6—C7—C2−3.7 (5)C12—C11—C16—C1756.2 (4)
C5—C6—C7—C8176.6 (3)C10—C11—C16—C17−66.6 (4)
C14—O2—C8—C9−2.8 (5)C12—C11—C16—C21−124.5 (3)
C14—O2—C8—C7177.4 (3)C10—C11—C16—C21112.6 (4)
C2—C7—C8—C91.1 (5)C21—C16—C17—C18−2.2 (6)
C6—C7—C8—C9−179.1 (3)C11—C16—C17—C18177.0 (3)
C2—C7—C8—O2−179.0 (3)C16—C17—C18—C190.7 (6)
C6—C7—C8—O20.7 (4)C17—C18—C19—C201.3 (6)
O2—C8—C9—C10177.5 (3)C17—C18—C19—Br1−179.9 (3)
C7—C8—C9—C10−2.6 (5)C18—C19—C20—C21−1.7 (6)
O1—C1—C10—C9−177.2 (3)Br1—C19—C20—C21179.6 (3)
C2—C1—C10—C92.7 (5)C17—C16—C21—C201.9 (5)
O1—C1—C10—C112.3 (5)C11—C16—C21—C20−177.3 (3)
C2—C1—C10—C11−177.8 (3)C19—C20—C21—C160.0 (6)
C8—C9—C10—C10.7 (5)
D—H···AD—HH···AD···AD—H···A
N1—H1···N2i0.88 (1)2.22 (2)3.059 (5)159 (4)
N1—H2···O2ii0.87 (3)2.56 (5)3.324 (4)147 (4)
C18—H18···Cg1iii0.932.873.528 (4)129
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the C2–C7 ring.

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1⋯N2i 0.88 (1)2.22 (2)3.059 (5)159 (4)
N1—H2⋯O2ii 0.87 (3)2.56 (5)3.324 (4)147 (4)
C18—H18⋯Cg1iii 0.932.873.528 (4)129

Symmetry codes: (i) ; (ii) ; (iii) .

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