Literature DB >> 23634020

Hexaaqua-copper(II) bis-(tetra-fluorido-borate)-pyrazine 1,4-dioxide (1/3).

Jan L Wikaira1, Christopher P Landee, Mark M Turnbull.   

Abstract

The crystal structure of the title compound, [Cu(H2O)6](BF4)2·3C4H4N2O2, comprises discrete [Cu(H2O)6](2+) cations and BF4 (-) anions along with three equivalents of pyrazine 1,4-dioxide (pzdo). The hexa-aqua-copper(II) ion and all three pzdo mol-ecules lie about crystallographic inversion centers. The lattice is supported by an extensive hydrogen-bonding network. O-H⋯O hydrogen bonding between the [Cu(H2O)6](2+) and pzdo units creates a pseudo-hexa-gonal lattice parallel to the bc plane. The BF4 (-) anions lie in the voids of that lattice, held in place by O-H⋯F hydrogen bonds, and also generate BF4 (-)-pzdo-BF4 (-)-pzdo stacks via short F⋯N contacts [2.866 (3)-3.283 (4) Å].

Entities:  

Year:  2013        PMID: 23634020      PMCID: PMC3629502          DOI: 10.1107/S1600536813007629

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures see: Blake et al. (2000 ▶) [catena-(tris­(μ3-pyrazino­(2,3-f)quinoxaline)tris­ilver(I) tris­(tetra­fluorido­bor­ate) nitro­methane)]; Muesmann et al. (2011 ▶) [hexa­aqua­copper(II) 2,3,5,6-tetra­fluoro-1,4-benzene­disulfonate]; Jia et al. (2005 ▶) [hexa­kis­(tricyclo­hexyl­phosphine oxide) hexa­aqua­copper(II) bis­(tetra­fluoridoborate) sesquihydrate]; Ma et al. (2001 ▶) [hexa­aqua­copper(II) dichloride (4,4′-bipyridine-N,N′-dioxide) dihydrate]; Lu et al. (2009 ▶) [N,N′-diethyl­pyrazine­diium bis­(tetra­fluoridoborate)]; Turksoy et al. (2003 ▶) [2,5-bis­(2-meth­oxy­phen­yl)-3,6-dimethyl­pyrazinium bis­(tetra­fluorido­borate)]; Schlueter et al. (2012 ▶) [catena-[(μ2-pyrazine-N,N′-dioxide)diaqua­dichloro­copper(II)]; Shatruk et al. (2006 ▶) [Cu(II)(hat) tetra­fluoridoborate; hat = 1,4,5,8,9,12-hexa­aza­triphenyl­ene]; Verbitsky et al. (2008 ▶) [2,3-dicyano-1-ethyl-5-(4-fluoro­phen­yl)pyrazinium tetra­fluoridoborate].

Experimental

Crystal data

[Cu(H2O)6](BF4)2·3C4H4N2O2 M = 681.53 Triclinic, a = 6.4001 (4) Å b = 10.2719 (7) Å c = 10.9162 (8) Å α = 110.928 (6)° β = 104.327 (6)° γ = 93.937 (5)° V = 639.59 (7) Å3 Z = 1 Cu Kα radiation μ = 2.40 mm−1 T = 120 K 0.50 × 0.4 0× 0.35 mm

Data collection

Agilent SuperNova (Dual, Cu at zero, Atlas) diffractometer Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011 ▶) T min = 0.781, T max = 1.000 3851 measured reflections 2399 independent reflections 2356 reflections with I > 2σ(I) R int = 0.015

Refinement

R[F 2 > 2σ(F 2)] = 0.045 wR(F 2) = 0.111 S = 1.06 2399 reflections 206 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 1.47 e Å−3 Δρmin = −0.85 e Å−3 Data collection: CrysAlis PRO (Agilent, 2011 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL and Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: SHELXL97, enCIFer (Allen et al., 2004 ▶) and publCIF (Westrip, 2010 ▶). Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813007629/sj5306sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813007629/sj5306Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(H2O)6](BF4)2·3C4H4N2O2Z = 1
Mr = 681.53F(000) = 345
Triclinic, P1Dx = 1.769 Mg m3
Hall symbol: -P 1Cu Kα radiation, λ = 1.54184 Å
a = 6.4001 (4) ÅCell parameters from 3193 reflections
b = 10.2719 (7) Åθ = 4.5–73.6°
c = 10.9162 (8) ŵ = 2.40 mm1
α = 110.928 (6)°T = 120 K
β = 104.327 (6)°Block, light blue
γ = 93.937 (5)°0.5 × 0.4 × 0.35 mm
V = 639.59 (7) Å3
Agilent SuperNova (Dual, Cu at zero, Atlas) diffractometer2399 independent reflections
Radiation source: fine-focus sealed tube2356 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.015
Detector resolution: 10.6501 pixels mm-1θmax = 70.1°, θmin = 4.5°
ω scansh = −7→7
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011)k = −8→12
Tmin = 0.781, Tmax = 1.000l = −13→12
3851 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.045H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.111w = 1/[σ2(Fo2) + (0.0476P)2 + 1.833P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max = 0.001
2399 reflectionsΔρmax = 1.47 e Å3
206 parametersΔρmin = −0.85 e Å3
0 restraintsExtinction correction: SHELXTL (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0258 (19)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.50000.50000.50000.0101 (2)
O10.3542 (3)0.3009 (2)0.4022 (2)0.0147 (4)
H1A0.234 (7)0.289 (4)0.409 (4)0.018*
H1B0.340 (6)0.266 (4)0.326 (4)0.018*
O20.2162 (3)0.5606 (2)0.4493 (2)0.0226 (5)
H2A0.178 (6)0.631 (5)0.493 (4)0.027*
H2B0.131 (7)0.525 (4)0.378 (5)0.027*
O30.4517 (4)0.5081 (2)0.7053 (2)0.0184 (4)
H3A0.355 (7)0.525 (4)0.729 (4)0.022*
H3B0.475 (6)0.439 (4)0.709 (4)0.022*
N11−0.0418 (4)0.4676 (2)0.1034 (2)0.0140 (5)
O11−0.0811 (3)0.4372 (2)0.2040 (2)0.0196 (4)
C12−0.1425 (5)0.5635 (3)0.0635 (3)0.0189 (6)
H12−0.24140.60760.10690.023*
C130.1006 (5)0.4040 (3)0.0397 (3)0.0179 (6)
H130.17050.33780.06610.022*
N21−0.6322 (4)0.0764 (2)0.0681 (2)0.0120 (5)
O21−0.7602 (3)0.1492 (2)0.1319 (2)0.0173 (4)
C22−0.4126 (4)0.1135 (3)0.1184 (3)0.0165 (6)
H22−0.35080.19150.20000.020*
C23−0.7198 (4)−0.0376 (3)−0.0509 (3)0.0149 (5)
H23−0.8710−0.0643−0.08660.018*
N310.0263 (4)0.8928 (2)0.5452 (2)0.0136 (5)
O310.0475 (3)0.7870 (2)0.5868 (2)0.0171 (4)
C32−0.1066 (4)0.9842 (3)0.5873 (3)0.0159 (6)
H32−0.17980.97470.64810.019*
C330.1346 (4)0.9090 (3)0.4589 (3)0.0167 (6)
H330.22870.84720.43060.020*
B10.4841 (5)0.8023 (4)0.2195 (3)0.0183 (6)
F10.4718 (4)0.9441 (2)0.2745 (2)0.0390 (5)
F20.4757 (4)0.7527 (3)0.0834 (2)0.0472 (6)
F30.6823 (4)0.7802 (2)0.2911 (2)0.0506 (7)
F40.3235 (4)0.7182 (3)0.2381 (3)0.0523 (7)
U11U22U33U12U13U23
Cu10.0087 (3)0.0093 (3)0.0117 (3)0.00147 (19)0.0027 (2)0.0033 (2)
O10.0142 (10)0.0137 (9)0.0148 (10)−0.0002 (7)0.0067 (8)0.0028 (8)
O20.0159 (10)0.0231 (11)0.0179 (11)0.0095 (9)−0.0011 (8)−0.0016 (9)
O30.0209 (11)0.0207 (11)0.0208 (10)0.0065 (9)0.0114 (8)0.0122 (9)
N110.0117 (10)0.0164 (11)0.0105 (11)0.0015 (8)0.0007 (8)0.0031 (9)
O110.0179 (10)0.0281 (11)0.0145 (10)0.0035 (8)0.0048 (8)0.0102 (8)
C120.0163 (13)0.0230 (14)0.0188 (14)0.0097 (11)0.0068 (11)0.0076 (12)
C130.0158 (13)0.0182 (14)0.0186 (14)0.0072 (11)0.0026 (11)0.0064 (11)
N210.0109 (10)0.0121 (10)0.0125 (11)0.0031 (8)0.0041 (8)0.0037 (9)
O210.0123 (9)0.0180 (10)0.0181 (10)0.0059 (7)0.0069 (7)0.0010 (8)
C220.0134 (13)0.0162 (13)0.0141 (13)0.0010 (10)0.0020 (10)0.0008 (10)
C230.0100 (12)0.0163 (13)0.0142 (13)0.0007 (10)0.0012 (10)0.0028 (10)
N310.0110 (10)0.0122 (10)0.0157 (11)−0.0003 (8)0.0031 (9)0.0041 (9)
O310.0174 (10)0.0139 (9)0.0222 (10)0.0030 (7)0.0074 (8)0.0084 (8)
C320.0141 (13)0.0147 (13)0.0177 (13)0.0013 (10)0.0079 (10)0.0030 (11)
C330.0148 (13)0.0151 (13)0.0220 (14)0.0048 (10)0.0107 (11)0.0053 (11)
B10.0147 (15)0.0237 (16)0.0178 (15)0.0024 (12)0.0063 (12)0.0088 (13)
F10.0526 (13)0.0337 (11)0.0487 (13)0.0253 (10)0.0301 (11)0.0230 (10)
F20.0762 (17)0.0527 (14)0.0303 (11)0.0296 (13)0.0287 (11)0.0243 (10)
F30.0430 (13)0.0381 (12)0.0410 (13)0.0166 (10)−0.0132 (10)−0.0035 (10)
F40.0483 (14)0.0424 (13)0.0538 (15)−0.0145 (11)0.0319 (12)−0.0031 (11)
Cu1—O11.9692 (19)N21—O211.307 (3)
Cu1—O1i1.9692 (19)N21—C221.348 (4)
Cu1—O21.974 (2)N21—C231.355 (3)
Cu1—O2i1.974 (2)C22—C23iii1.363 (4)
Cu1—O3i2.310 (2)C22—H220.9300
Cu1—O32.310 (2)C23—C22iii1.363 (4)
O1—H1A0.80 (4)C23—H230.9300
O1—H1B0.76 (4)N31—O311.322 (3)
O2—H2A0.81 (4)N31—C321.346 (4)
O2—H2B0.77 (4)N31—C331.348 (4)
O3—H3A0.74 (4)C32—C33iv1.366 (4)
O3—H3B0.74 (4)C32—H320.9300
N11—O111.318 (3)C33—C32iv1.366 (4)
N11—C131.346 (4)C33—H330.9300
N11—C121.353 (4)B1—F21.373 (4)
C12—C13ii1.363 (4)B1—F11.379 (4)
C12—H120.9300B1—F31.395 (4)
C13—C12ii1.363 (4)B1—F41.397 (4)
C13—H130.9300
O1—Cu1—O1i180.00 (14)C13ii—C12—H12119.7
O1—Cu1—O289.66 (9)N11—C13—C12ii120.1 (3)
O1i—Cu1—O290.34 (9)N11—C13—H13119.9
O1—Cu1—O2i90.34 (9)C12ii—C13—H13119.9
O1i—Cu1—O2i89.66 (9)O21—N21—C22121.0 (2)
O2—Cu1—O2i180.00 (15)O21—N21—C23120.0 (2)
O1—Cu1—O3i87.37 (8)C22—N21—C23119.0 (2)
O1i—Cu1—O3i92.63 (8)N21—C22—C23iii120.7 (3)
O2—Cu1—O3i88.50 (9)N21—C22—H22119.7
O2i—Cu1—O3i91.50 (9)C23iii—C22—H22119.7
O1—Cu1—O392.63 (8)N21—C23—C22iii120.4 (2)
O1i—Cu1—O387.37 (8)N21—C23—H23119.8
O2—Cu1—O391.50 (9)C22iii—C23—H23119.8
O2i—Cu1—O388.50 (9)O31—N31—C32120.1 (2)
O3i—Cu1—O3180.000 (1)O31—N31—C33120.5 (2)
Cu1—O1—H1A112 (3)C32—N31—C33119.3 (2)
Cu1—O1—H1B118 (3)N31—C32—C33iv120.4 (3)
H1A—O1—H1B104 (4)N31—C32—H32119.8
Cu1—O2—H2A127 (3)C33iv—C32—H32119.8
Cu1—O2—H2B123 (3)N31—C33—C32iv120.2 (3)
H2A—O2—H2B109 (4)N31—C33—H33119.9
Cu1—O3—H3A127 (3)C32iv—C33—H33119.9
Cu1—O3—H3B105 (3)F2—B1—F1113.8 (3)
H3A—O3—H3B109 (4)F2—B1—F3107.4 (3)
O11—N11—C13120.2 (2)F1—B1—F3108.8 (3)
O11—N11—C12120.6 (2)F2—B1—F4109.6 (3)
C13—N11—C12119.2 (2)F1—B1—F4111.9 (3)
N11—C12—C13ii120.7 (3)F3—B1—F4104.7 (3)
N11—C12—H12119.7
O11—N11—C12—C13ii179.4 (2)O21—N21—C23—C22iii179.5 (2)
C13—N11—C12—C13ii−0.2 (5)C22—N21—C23—C22iii0.0 (4)
O11—N11—C13—C12ii−179.4 (2)O31—N31—C32—C33iv−177.9 (2)
C12—N11—C13—C12ii0.2 (4)C33—N31—C32—C33iv1.1 (4)
O21—N21—C22—C23iii−179.5 (2)O31—N31—C33—C32iv177.9 (2)
C23—N21—C22—C23iii0.0 (4)C32—N31—C33—C32iv−1.1 (4)
D—H···AD—HH···AD···AD—H···A
O1—H1A···O31v0.80 (4)1.93 (4)2.711 (3)166 (4)
O1—H1B···O21vi0.76 (4)1.94 (4)2.676 (3)166 (4)
O2—H2A···O310.81 (4)1.93 (4)2.735 (3)173 (4)
O2—H2B···O110.77 (4)1.89 (5)2.669 (3)179 (4)
O3—H3A···O11v0.74 (4)2.07 (4)2.806 (3)177 (4)
O3—H3B···F4i0.74 (4)2.28 (4)2.984 (4)158 (4)
O3—H3B···F3i0.74 (4)2.41 (4)3.042 (3)145 (4)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O1—H1A⋯O31i 0.80 (4)1.93 (4)2.711 (3)166 (4)
O1—H1B⋯O21ii 0.76 (4)1.94 (4)2.676 (3)166 (4)
O2—H2A⋯O310.81 (4)1.93 (4)2.735 (3)173 (4)
O2—H2B⋯O110.77 (4)1.89 (5)2.669 (3)179 (4)
O3—H3A⋯O11i 0.74 (4)2.07 (4)2.806 (3)177 (4)
O3—H3B⋯F4iii 0.74 (4)2.28 (4)2.984 (4)158 (4)
O3—H3B⋯F3iii 0.74 (4)2.41 (4)3.042 (3)145 (4)

Symmetry codes: (i) ; (ii) ; (iii) .

  6 in total

1.  Importance of halogen···halogen contacts for the structural and magnetic properties of CuX2(pyrazine-N,N′-dioxide)(H2O)2 (X = Cl and Br).

Authors:  John A Schlueter; Hyunsoo Park; Gregory J Halder; William R Armand; Cortney Dunmars; Karena W Chapman; Jamie L Manson; John Singleton; Ross McDonald; Alex Plonczak; Jinhee Kang; Chaghoon Lee; Myung-Hwan Whangbo; Tom Lancaster; Andrew J Steele; Isabel Franke; Jack D Wright; Stephen J Blundell; Francis L Pratt; Joseph deGeorge; Mark M Turnbull; Christopher P Landee
Journal:  Inorg Chem       Date:  2012-02-01       Impact factor: 5.165

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  N,N'-dimethylpyrazinediium bis(tetrafluoroborate) and N,N'-diethylpyrazinediium bis(tetrafluoroborate): new examples of anion-pi triads.

Authors:  Jianjiang Lu; Almaz S Jalilov; Jay K Kochi
Journal:  Acta Crystallogr C       Date:  2009-04-10       Impact factor: 1.172

4.  para-Benzene disulfonic acid and its tetrachloro and tetrafluoro derivatives--studies towards polyhalogenated metal-organic-frameworks with sulfo analogues of terephthalic acid.

Authors:  Thomas W T Muesmann; Christina Zitzer; Andrea Mietrach; Thorsten Klüner; Jens Christoffers; Mathias S Wickleder
Journal:  Dalton Trans       Date:  2011-02-21       Impact factor: 4.390

5.  Influence of anions on the dimensionality of extended networks based on Cu I cations and 1,4,5,8,9,12-hexaazatriphenylene (HAT) ligands.

Authors:  Mikhail Shatruk; Abdellatif Chouai; Kim R Dunbar
Journal:  Dalton Trans       Date:  2006-03-16       Impact factor: 4.390

6.  Variable dimensionality from mononuclear and trinuclear to one and two dimensions: a series of copper(II) compounds with 4,4'-dipyridine dioxide.

Authors:  B Q Ma; H L Sun; S Gao; G X Xu
Journal:  Inorg Chem       Date:  2001-11-19       Impact factor: 5.165

  6 in total

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