| Literature DB >> 23634013 |
Dan Zhao1, Fei Fei Li, Peng Liang, Jun-Ran Ren, Shen Qiu.
Abstract
The title compound, [Ba(C12H6O4)(H2O)2] n , is represented by a layer-like structure built of BaO8 polyhedra. The asymmetric unit contains a Ba(2+) ion, half a coordinating water mol-ecule and half a μ4-bridging naphthalene-1,8-dicarboxyl-ate (1,8-nap) ligand, the whole structure being generated by twofold rotational symmetry. The carboxyl-ate groups of the 1,8-nap ligands act as bridges linking four Ba(2+) ions, while each Ba(2+) ion is eight-coordinated by O atoms from four 1,8-nap ligands and two coordinating water mol-ecules. In the crystal, there are O-H⋯O hydrogen bonds involving the water mol-ecules and carboxyl-ate O atoms in the BaO8 polyhedra. Each BaO8 polyhedron is connected via corner-sharing water O atoms or edge-sharing ligand O atoms, forming a sheet parallel to the bc plane. These sheets stack along the a-axis direction and are connected via van der Waals forces only. The naphthalene groups protrude above and below the layers of the BaO8 polyhedra and there are voids of ca 208 Å(3) bounded by these groups. No residual electron density was found in this region. The crystal studied was twinned by pseudo-merohedry, with a refined twin component ratio of 0.5261 (1):0.4739 (1).Entities:
Year: 2013 PMID: 23634013 PMCID: PMC3629495 DOI: 10.1107/S1600536813006259
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Ba(C12H6O4)(H2O)2] | |
| Orthorhombic, | Mo |
| Hall symbol: -I 2b 2c | Cell parameters from 2836 reflections |
| θ = 2.7–27.1° | |
| µ = 3.25 mm−1 | |
| Prism, colourless | |
| 0.20 × 0.05 × 0.05 mm |
| Bruker APEXII CCD area-detector diffractometer | 1511 independent reflections |
| Radiation source: fine-focus sealed tube | 1344 reflections with |
| Graphite monochromator | |
| Detector resolution: 83.33 pixels mm-1 | θmax = 28.4°, θmin = 1.3° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 7968 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1511 reflections | (Δ/σ)max = 0.001 |
| 85 parameters | Δρmax = 0.54 e Å−3 |
| 0 restraints | Δρmin = −0.57 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Ba1 | 0.61452 (2) | 0.0000 | 0.2500 | 0.02892 (7) | |
| O1 | 0.4190 (2) | 0.05878 (6) | 0.5240 (3) | 0.0360 (5) | |
| C1 | 0.3754 (3) | 0.07360 (9) | 0.4035 (4) | 0.0236 (6) | |
| O2 | 0.3671 (2) | 0.05119 (7) | 0.2858 (2) | 0.0341 (5) | |
| C2 | 0.3410 (3) | 0.12190 (9) | 0.3935 (3) | 0.0253 (6) | |
| O3 | 0.7500 | −0.04396 (9) | 0.0000 | 0.0418 (8) | |
| H3 | 0.7197 | −0.0594 | −0.0742 | 0.050* | |
| C3 | 0.2500 | 0.14342 (12) | 0.5000 | 0.0239 (8) | |
| C4 | 0.2500 | 0.19041 (12) | 0.5000 | 0.0324 (10) | |
| C5 | 0.3323 (4) | 0.21277 (11) | 0.3902 (5) | 0.0486 (10) | |
| H5 | 0.3325 | 0.2432 | 0.3899 | 0.058* | |
| C6 | 0.4105 (4) | 0.19121 (11) | 0.2860 (4) | 0.0527 (10) | |
| H6 | 0.4610 | 0.2067 | 0.2123 | 0.063* | |
| C7 | 0.4163 (4) | 0.14507 (10) | 0.2877 (3) | 0.0386 (8) | |
| H7 | 0.4720 | 0.1303 | 0.2160 | 0.046* |
| Ba1 | 0.01894 (11) | 0.03182 (12) | 0.03599 (14) | 0.000 | 0.000 | 0.00999 (13) |
| O1 | 0.0321 (12) | 0.0315 (11) | 0.0445 (13) | 0.0027 (9) | −0.0065 (10) | 0.0124 (10) |
| C1 | 0.0140 (12) | 0.0213 (14) | 0.0356 (16) | −0.0012 (10) | 0.0042 (11) | −0.0009 (12) |
| O2 | 0.0330 (11) | 0.0314 (11) | 0.0380 (14) | −0.0029 (8) | 0.0096 (8) | −0.0132 (9) |
| C2 | 0.0279 (15) | 0.0225 (15) | 0.0255 (15) | −0.0033 (12) | −0.0016 (11) | −0.0004 (12) |
| O3 | 0.0412 (19) | 0.0472 (18) | 0.037 (2) | 0.000 | −0.0162 (15) | 0.000 |
| C3 | 0.025 (2) | 0.0220 (19) | 0.025 (2) | 0.000 | −0.0046 (16) | 0.000 |
| C4 | 0.034 (2) | 0.022 (2) | 0.041 (3) | 0.000 | −0.0010 (19) | 0.000 |
| C5 | 0.061 (2) | 0.0203 (17) | 0.065 (3) | −0.0016 (16) | 0.0042 (19) | 0.0087 (16) |
| C6 | 0.067 (2) | 0.0326 (18) | 0.058 (3) | −0.0034 (16) | 0.0213 (19) | 0.0164 (15) |
| C7 | 0.0463 (18) | 0.0366 (17) | 0.033 (2) | −0.0007 (14) | 0.0128 (13) | 0.0060 (13) |
| Ba1—O1i | 2.723 (2) | C2—C7 | 1.362 (4) |
| Ba1—O1ii | 2.723 (2) | C2—C3 | 1.417 (3) |
| Ba1—O2iii | 2.7324 (19) | O3—Ba1viii | 2.8806 (14) |
| Ba1—O2 | 2.7324 (19) | O3—H3 | 0.8587 |
| Ba1—O2iv | 2.7703 (19) | C3—C2ix | 1.417 (3) |
| Ba1—O2v | 2.7703 (19) | C3—C4 | 1.435 (5) |
| Ba1—O3vi | 2.8806 (14) | C4—C5ix | 1.407 (4) |
| Ba1—O3 | 2.8806 (14) | C4—C5 | 1.407 (4) |
| O1—C1 | 1.234 (4) | C5—C6 | 1.341 (5) |
| O1—Ba1ii | 2.723 (2) | C5—H5 | 0.9300 |
| C1—O2 | 1.259 (4) | C6—C7 | 1.410 (4) |
| C1—C2 | 1.509 (4) | C6—H6 | 0.9300 |
| O2—Ba1vii | 2.7703 (19) | C7—H7 | 0.9300 |
| O1i—Ba1—O1ii | 167.34 (9) | O2iv—Ba1—Ba1vii | 144.82 (4) |
| O1i—Ba1—O2iii | 101.55 (6) | O2v—Ba1—Ba1vii | 144.82 (4) |
| O1ii—Ba1—O2iii | 67.71 (6) | O3vi—Ba1—Ba1vii | 114.937 (13) |
| O1i—Ba1—O2 | 67.71 (6) | O3—Ba1—Ba1vii | 114.937 (13) |
| O1ii—Ba1—O2 | 101.55 (6) | C1iii—Ba1—Ba1vii | 50.87 (4) |
| O2iii—Ba1—O2 | 71.48 (8) | C1—Ba1—Ba1vii | 50.87 (4) |
| O1i—Ba1—O2iv | 68.40 (6) | O1i—Ba1—Ba1iv | 96.33 (4) |
| O1ii—Ba1—O2iv | 123.25 (6) | O1ii—Ba1—Ba1iv | 96.33 (4) |
| O2iii—Ba1—O2iv | 166.59 (9) | O2iii—Ba1—Ba1iv | 144.26 (4) |
| O2—Ba1—O2iv | 110.74 (7) | O2—Ba1—Ba1iv | 144.26 (4) |
| O1i—Ba1—O2v | 123.25 (6) | O2iv—Ba1—Ba1iv | 35.18 (4) |
| O1ii—Ba1—O2v | 68.40 (6) | O2v—Ba1—Ba1iv | 35.18 (4) |
| O2iii—Ba1—O2v | 110.74 (7) | O3vi—Ba1—Ba1iv | 65.063 (13) |
| O2—Ba1—O2v | 166.59 (9) | O3—Ba1—Ba1iv | 65.063 (13) |
| O2iv—Ba1—O2v | 70.35 (8) | C1iii—Ba1—Ba1iv | 129.13 (4) |
| O1i—Ba1—O3vi | 108.54 (7) | C1—Ba1—Ba1iv | 129.13 (4) |
| O1ii—Ba1—O3vi | 77.00 (7) | Ba1vii—Ba1—Ba1iv | 180.0 |
| O2iii—Ba1—O3vi | 134.45 (5) | C1—O1—Ba1ii | 149.05 (19) |
| O2—Ba1—O3vi | 89.09 (5) | O1—C1—O2 | 123.5 (3) |
| O2iv—Ba1—O3vi | 58.83 (5) | O1—C1—C2 | 118.3 (3) |
| O2v—Ba1—O3vi | 80.11 (6) | O2—C1—C2 | 118.0 (3) |
| O1i—Ba1—O3 | 77.00 (7) | O1—C1—Ba1 | 84.93 (16) |
| O1ii—Ba1—O3 | 108.54 (7) | O2—C1—Ba1 | 48.58 (13) |
| O2iii—Ba1—O3 | 89.09 (5) | C2—C1—Ba1 | 138.71 (18) |
| O2—Ba1—O3 | 134.45 (5) | C1—O2—Ba1 | 111.20 (16) |
| O2iv—Ba1—O3 | 80.11 (6) | C1—O2—Ba1vii | 116.85 (16) |
| O2v—Ba1—O3 | 58.83 (5) | Ba1—O2—Ba1vii | 109.08 (7) |
| O3vi—Ba1—O3 | 130.13 (3) | C7—C2—C3 | 120.9 (3) |
| O1i—Ba1—C1iii | 93.75 (7) | C7—C2—C1 | 116.6 (3) |
| O1ii—Ba1—C1iii | 78.20 (7) | C3—C2—C1 | 122.1 (3) |
| O2iii—Ba1—C1iii | 20.22 (6) | Ba1viii—O3—Ba1 | 124.44 (10) |
| O2—Ba1—C1iii | 85.06 (6) | Ba1viii—O3—H3 | 77.7 |
| O2iv—Ba1—C1iii | 147.38 (7) | Ba1—O3—H3 | 136.4 |
| O2v—Ba1—C1iii | 100.91 (6) | C2—C3—C2ix | 124.8 (3) |
| O3vi—Ba1—C1iii | 152.80 (6) | C2—C3—C4 | 117.62 (17) |
| O3—Ba1—C1iii | 69.07 (6) | C2ix—C3—C4 | 117.62 (17) |
| O1i—Ba1—C1 | 78.20 (7) | C5ix—C4—C5 | 121.9 (4) |
| O1ii—Ba1—C1 | 93.75 (7) | C5ix—C4—C3 | 119.0 (2) |
| O2iii—Ba1—C1 | 85.06 (6) | C5—C4—C3 | 119.0 (2) |
| O2—Ba1—C1 | 20.22 (6) | C6—C5—C4 | 121.6 (3) |
| O2iv—Ba1—C1 | 100.91 (6) | C6—C5—H5 | 119.2 |
| O2v—Ba1—C1 | 147.38 (7) | C4—C5—H5 | 119.2 |
| O3vi—Ba1—C1 | 69.07 (6) | C5—C6—C7 | 120.2 (3) |
| O3—Ba1—C1 | 152.80 (6) | C5—C6—H6 | 119.9 |
| C1iii—Ba1—C1 | 101.74 (9) | C7—C6—H6 | 119.9 |
| O1i—Ba1—Ba1vii | 83.67 (4) | C2—C7—C6 | 120.5 (3) |
| O1ii—Ba1—Ba1vii | 83.67 (4) | C2—C7—H7 | 119.7 |
| O2iii—Ba1—Ba1vii | 35.74 (4) | C6—C7—H7 | 119.7 |
| O2—Ba1—Ba1vii | 35.74 (4) |
| H··· | ||||
| O3—H3···O2x | 0.86 | 2.07 | 2.777 (2) | 140 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O3—H3⋯O2i | 0.86 | 2.07 | 2.777 (2) | 140 |
Symmetry code: (i) .