Literature DB >> 23633997

catena-Poly[[[diaqua-(tetra-methyl-ethylenediamine-κ(2) N,N')nickel(II)]-μ-sulfato-κ(2) O:O'] monohydrate].

Guntram Schmidt1, Kurt Merzweiler.   

Abstract

The title compound, {[Ni(SO4)(C6H16N2)(H2O)2]·H2O} n , contains a Ni(II) atom that is coordinated nearly octa-hedrally by a chelating tetra-ethyl-enediamine (tmeda) ligand, two water mol-ecules in a cis arrangement and two O atoms of two sulfate anions in a trans arrangement. The sulfate anions act as μ2-bridging ligands leading to a chain structure of alternating NiO4N2 octa-hedra and SO4 tetra-hedra parallel to [001]. The polymeric chains are linked by O-H⋯O hydrogen bonds between coordinating water mol-ecules and sulfate anions to give double strands. There is a lattice water mol-ecule which is also involved in O-H⋯O hydrogen bonding between adjacent [Ni(SO4)(tmeda)(H2O)2] chains.

Entities:  

Year:  2013        PMID: 23633997      PMCID: PMC3629479          DOI: 10.1107/S1600536813006557

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For crystal structures of oligo- and polymeric nickel(II) tmeda complexes, see: Anderson et al. (2009 ▶); Erer et al. (2010 ▶). For related literature on one-dimensional metal sulfates, see: Behera & Rao (2006 ▶).

Experimental

Crystal data

[Ni(SO4)(C6H16N2)(H2O)2]·H2O M = 325.03 Orthorhombic, a = 21.108 (4) Å b = 9.9335 (19) Å c = 6.3879 (13) Å V = 1339.4 (5) Å3 Z = 4 Mo Kα radiation μ = 1.63 mm−1 T = 223 K 0.48 × 0.11 × 0.11 mm

Data collection

Stoe IPDS diffractometer Absorption correction: numerical (IPDS; Stoe & Cie, 1999 ▶) T min = 0.648, T max = 0.841 10054 measured reflections 2585 independent reflections 2291 reflections with I > 2σ(I) R int = 0.054

Refinement

R[F 2 > 2σ(F 2)] = 0.023 wR(F 2) = 0.052 S = 1.04 2585 reflections 176 parameters 7 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.37 e Å−3 Δρmin = −0.31 e Å−3 Absolute structure: Flack (1983 ▶), 1167 Friedel pairs Flack parameter: −0.005 (13) Data collection: IPDS (Stoe & Cie, 1999 ▶); cell refinement: IPDS; data reduction: IPDS; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 2009 ▶); software used to prepare material for publication: SHELXL97. Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813006557/wm2722sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813006557/wm2722Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni(SO4)(C6H16N2)(H2O)2]·H2OF(000) = 688
Mr = 325.03Dx = 1.612 Mg m3
Orthorhombic, Pna21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2c -2nCell parameters from 8000 reflections
a = 21.108 (4) Åθ = 2.2–25.8°
b = 9.9335 (19) ŵ = 1.63 mm1
c = 6.3879 (13) ÅT = 223 K
V = 1339.4 (5) Å3Block, green
Z = 40.48 × 0.11 × 0.11 mm
Stoe IPDS diffractometer2585 independent reflections
Radiation source: fine-focus sealed tube2291 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.054
area detector scansθmax = 25.9°, θmin = 2.3°
Absorption correction: numerical (IPDS; Stoe & Cie, 1999)h = −25→25
Tmin = 0.648, Tmax = 0.841k = −12→12
10054 measured reflectionsl = −7→7
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.023H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.052w = 1/[σ2(Fo2) + (0.0286P)2] where P = (Fo2 + 2Fc2)/3
S = 1.04(Δ/σ)max = 0.001
2585 reflectionsΔρmax = 0.37 e Å3
176 parametersΔρmin = −0.31 e Å3
7 restraintsAbsolute structure: Flack (1983), 1167 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: −0.005 (13)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.24703 (13)0.7260 (3)0.0085 (5)0.0305 (6)
H1C0.22320.7845−0.08420.037*
H1B0.24240.6334−0.03710.037*
H1A0.29140.75110.00510.037*
C40.16332 (11)0.9525 (2)0.2039 (4)0.0224 (6)
H4B0.16371.04730.24620.027*
H4A0.16250.94890.05070.027*
C20.26524 (13)0.6637 (3)0.3636 (5)0.0329 (7)
H2C0.25060.67170.50700.039*
H2B0.30790.69960.35270.039*
H2A0.26530.56960.32290.039*
C30.22243 (11)0.8836 (3)0.2836 (5)0.0244 (6)
H3B0.25990.92790.22500.029*
H3A0.22440.89150.43640.029*
C50.05032 (14)0.9321 (3)0.1665 (5)0.0332 (7)
H5C0.01210.89230.22380.040*
H5B0.05520.90480.02160.040*
H5A0.04731.02940.17420.040*
C60.09619 (15)0.9283 (3)0.5084 (5)0.0316 (7)
H6C0.05800.88670.56260.038*
H6B0.09201.02540.51430.038*
H6A0.13220.90050.59220.038*
N10.22264 (8)0.7398 (2)0.2241 (4)0.0197 (5)
N20.10595 (9)0.8859 (2)0.2890 (3)0.0190 (5)
Ni0.125910 (11)0.67593 (3)0.25156 (6)0.01456 (8)
O10.11212 (10)0.69565 (19)0.9294 (3)0.0245 (5)
O20.13632 (9)0.6444 (2)0.5737 (3)0.0232 (5)
O30.02891 (8)0.6195 (2)0.7004 (3)0.0262 (4)
O40.10994 (9)0.46409 (19)0.8110 (3)0.0265 (4)
O50.15204 (9)0.47588 (19)0.2051 (3)0.0240 (4)
H10.1316 (12)0.424 (3)0.283 (4)0.029*
H20.1375 (14)0.463 (3)0.084 (3)0.029*
O60.03092 (8)0.6302 (2)0.2801 (3)0.0234 (4)
H30.0187 (12)0.557 (2)0.234 (6)0.028*
H40.0213 (14)0.634 (3)0.406 (3)0.028*
O70.08191 (10)0.2998 (2)0.4475 (3)0.0305 (5)
H50.0789 (16)0.343 (3)0.558 (4)0.037*
H60.0442 (10)0.309 (3)0.414 (5)0.037*
S0.09690 (2)0.60503 (5)0.75426 (13)0.01806 (12)
U11U22U33U12U13U23
C10.0277 (15)0.0361 (17)0.0278 (15)−0.0013 (12)0.0109 (12)−0.0029 (14)
C40.0255 (13)0.0152 (11)0.0265 (17)−0.0026 (9)0.0032 (10)0.0009 (11)
C20.0187 (13)0.0386 (18)0.0413 (17)0.0035 (12)−0.0036 (12)0.0087 (16)
C30.0203 (11)0.0238 (12)0.0290 (17)−0.0054 (9)0.0000 (11)−0.0024 (14)
C50.0262 (14)0.0265 (15)0.0470 (18)0.0070 (12)−0.0093 (12)0.0022 (14)
C60.0396 (17)0.0267 (16)0.0284 (15)0.0031 (12)0.0099 (13)−0.0099 (13)
N10.0173 (9)0.0215 (10)0.0202 (13)0.0008 (7)0.0012 (10)−0.0005 (11)
N20.0178 (9)0.0203 (10)0.0188 (14)−0.0005 (8)0.0008 (8)−0.0001 (10)
Ni0.01562 (12)0.01675 (14)0.01132 (12)−0.00151 (11)−0.00008 (17)0.00004 (18)
O10.0349 (11)0.0235 (12)0.0151 (10)−0.0064 (8)−0.0011 (9)−0.0023 (9)
O20.0215 (10)0.0346 (12)0.0135 (9)−0.0053 (8)0.0024 (7)0.0030 (9)
O30.0192 (8)0.0360 (10)0.0235 (11)−0.0042 (7)0.0023 (7)0.0020 (8)
O40.0342 (10)0.0240 (10)0.0215 (11)−0.0027 (8)−0.0042 (7)−0.0013 (8)
O50.0335 (10)0.0216 (10)0.0170 (11)−0.0004 (8)−0.0007 (7)0.0005 (8)
O60.0223 (8)0.0286 (9)0.0193 (11)−0.0084 (6)0.0004 (9)0.0028 (11)
O70.0331 (11)0.0285 (12)0.0298 (11)0.0014 (9)0.0020 (9)−0.0013 (10)
S0.0190 (2)0.0221 (3)0.0131 (2)−0.00424 (19)0.0019 (4)−0.0007 (4)
C1—N11.477 (4)C6—H6C0.9700
C1—H1C0.9700C6—H6B0.9700
C1—H1B0.9700C6—H6A0.9700
C1—H1A0.9700N1—Ni2.1453 (19)
C4—N21.483 (3)N2—Ni2.141 (2)
C4—C31.511 (4)Ni—O62.0639 (17)
C4—H4B0.9800Ni—O52.084 (2)
C4—H4A0.9800Ni—O1i2.088 (2)
C2—N11.475 (4)Ni—O22.0931 (19)
C2—H2C0.9700O1—S1.471 (2)
C2—H2B0.9700O1—Niii2.088 (2)
C2—H2A0.9700O2—S1.4751 (19)
C3—N11.478 (3)O3—S1.4828 (18)
C3—H3B0.9800O4—S1.472 (2)
C3—H3A0.9800O5—H10.834 (18)
C5—N21.484 (3)O5—H20.841 (18)
C5—H5C0.9700O6—H30.825 (17)
C5—H5B0.9700O6—H40.830 (17)
C5—H5A0.9700O7—H50.832 (18)
C6—N21.477 (4)O7—H60.829 (18)
N1—C1—H1C109.5C2—N1—Ni112.29 (17)
N1—C1—H1B109.5C1—N1—Ni112.36 (18)
H1C—C1—H1B109.5C3—N1—Ni105.19 (13)
N1—C1—H1A109.5C6—N2—C4109.5 (2)
H1C—C1—H1A109.5C6—N2—C5107.6 (2)
H1B—C1—H1A109.5C4—N2—C5108.4 (2)
N2—C4—C3110.4 (2)C6—N2—Ni114.27 (17)
N2—C4—H4B109.6C4—N2—Ni103.46 (15)
C3—C4—H4B109.6C5—N2—Ni113.46 (16)
N2—C4—H4A109.6O6—Ni—O593.42 (8)
C3—C4—H4A109.6O6—Ni—O1i88.42 (8)
H4B—C4—H4A108.1O5—Ni—O1i89.20 (7)
N1—C2—H2C109.5O6—Ni—O288.97 (8)
N1—C2—H2B109.5O5—Ni—O288.25 (8)
H2C—C2—H2B109.5O1i—Ni—O2176.24 (7)
N1—C2—H2A109.5O6—Ni—N290.77 (8)
H2C—C2—H2A109.5O5—Ni—N2175.58 (8)
H2B—C2—H2A109.5O1i—Ni—N289.51 (8)
N1—C3—C4110.7 (2)O2—Ni—N293.23 (8)
N1—C3—H3B109.5O6—Ni—N1175.51 (8)
C4—C3—H3B109.5O5—Ni—N191.06 (8)
N1—C3—H3A109.5O1i—Ni—N191.40 (9)
C4—C3—H3A109.5O2—Ni—N191.41 (8)
H3B—C3—H3A108.1N2—Ni—N184.74 (8)
N2—C5—H5C109.5S—O1—Niii136.26 (12)
N2—C5—H5B109.5S—O2—Ni138.52 (11)
H5C—C5—H5B109.5Ni—O5—H1111 (2)
N2—C5—H5A109.5Ni—O5—H2100 (2)
H5C—C5—H5A109.5H1—O5—H2105 (3)
H5B—C5—H5A109.5Ni—O6—H3117.8 (19)
N2—C6—H6C109.5Ni—O6—H4108 (2)
N2—C6—H6B109.5H3—O6—H4108 (3)
H6C—C6—H6B109.5H5—O7—H695 (3)
N2—C6—H6A109.5O1—S—O4110.72 (12)
H6C—C6—H6A109.5O1—S—O2108.00 (10)
H6B—C6—H6A109.5O4—S—O2109.83 (12)
C2—N1—C1107.7 (2)O1—S—O3109.19 (12)
C2—N1—C3110.0 (2)O4—S—O3109.28 (11)
C1—N1—C3109.3 (2)O2—S—O3109.80 (11)
N2—C4—C3—N158.5 (3)C3—N1—Ni—O5−171.47 (18)
C4—C3—N1—C2−158.6 (2)C2—N1—Ni—O1i−141.1 (2)
C4—C3—N1—C183.4 (2)C1—N1—Ni—O1i−19.51 (19)
C4—C3—N1—Ni−37.4 (3)C3—N1—Ni—O1i99.30 (18)
C3—C4—N2—C677.5 (3)C2—N1—Ni—O236.4 (2)
C3—C4—N2—C5−165.5 (2)C1—N1—Ni—O2158.00 (19)
C3—C4—N2—Ni−44.8 (2)C3—N1—Ni—O2−83.19 (19)
C6—N2—Ni—O679.76 (18)C2—N1—Ni—N2129.6 (2)
C4—N2—Ni—O6−161.23 (16)C1—N1—Ni—N2−108.89 (19)
C5—N2—Ni—O6−44.05 (19)C3—N1—Ni—N29.93 (18)
C6—N2—Ni—O1i168.18 (18)O6—Ni—O2—S0.8 (2)
C4—N2—Ni—O1i−72.82 (15)O5—Ni—O2—S−92.6 (2)
C5—N2—Ni—O1i44.37 (19)N2—Ni—O2—S91.5 (2)
C6—N2—Ni—O2−9.25 (18)N1—Ni—O2—S176.3 (2)
C4—N2—Ni—O2109.75 (15)Niii—O1—S—O4−18.4 (2)
C5—N2—Ni—O2−133.06 (19)Niii—O1—S—O2−138.68 (15)
C6—N2—Ni—N1−100.37 (18)Niii—O1—S—O3102.0 (2)
C4—N2—Ni—N118.63 (15)Ni—O2—S—O1−135.26 (17)
C5—N2—Ni—N1135.8 (2)Ni—O2—S—O4103.9 (2)
C2—N1—Ni—O5−51.8 (2)Ni—O2—S—O3−16.3 (2)
C1—N1—Ni—O569.72 (19)
D—H···AD—HH···AD···AD—H···A
O5—H2···O4i0.84 (2)1.84 (2)2.672 (2)171 (3)
O5—H1···O70.83 (2)1.93 (2)2.765 (3)176 (3)
O6—H4···O30.83 (2)1.89 (2)2.687 (3)160 (3)
O6—H3···O3iii0.83 (2)2.03 (2)2.829 (3)162 (3)
O7—H5···O40.83 (2)2.12 (2)2.899 (3)157 (3)
O7—H6···O3iii0.83 (2)2.18 (2)2.934 (3)151 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O5—H2⋯O4i 0.84 (2)1.84 (2)2.672 (2)171 (3)
O5—H1⋯O70.83 (2)1.93 (2)2.765 (3)176 (3)
O6—H4⋯O30.83 (2)1.89 (2)2.687 (3)160 (3)
O6—H3⋯O3ii 0.83 (2)2.03 (2)2.829 (3)162 (3)
O7—H5⋯O40.83 (2)2.12 (2)2.899 (3)157 (3)
O7—H6⋯O3ii 0.83 (2)2.18 (2)2.934 (3)151 (3)

Symmetry codes: (i) ; (ii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  A novel tridentate coordination mode for the carbonatonickel system exhibited in an unusual hexanuclear nickel(II) mu3-carbonato-bridged complex.

Authors:  James C Anderson; Alexander J Blake; Rafael Bou Moreno; Guillaume Raynel; Joris van Slageren
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