| Literature DB >> 23632094 |
Jong-Hyeon Park1, Kwang-Nyeong Lee, Young-Joon Ko, Su-Mi Kim, Hyang-Sim Lee, Yeun-Kyung Shin, Hyun-Joo Sohn, Jee-Yong Park, Jung-Yong Yeh, Yoon-Hee Lee, Min-Jeong Kim, Yi-Seok Joo, Hachung Yoon, Soon-Seek Yoon, In-Soo Cho, Byounghan Kim.
Abstract
An outbreak of foot-and-mouth disease caused by serotype O virus occurred in cattle and pigs in South Korea during November 2010-April 2011. The highest rates of case and virus detection were observed 44 days after the first case was detected. Detection rates declined rapidly after culling and completion of a national vaccination program.Entities:
Keywords: Aphthovirus; FMD; FMDV; Picornaviridae; South Korea; diagnosis; epidemic; foot-and-mouth disease; foot-and-mouth disease virus; herpangina; hoof-and-mouth disease; vaccination; viruses
Mesh:
Substances:
Year: 2013 PMID: 23632094 PMCID: PMC3647416 DOI: 10.3201/eid1904.121320
Source DB: PubMed Journal: Emerg Infect Dis ISSN: 1080-6040 Impact factor: 6.883
Laboratory diagnosis of FMDV infection in specimens from a pig-farming complex, Gyeongbuk Province, South Korea, November–December 2010
| Farms in pig complex | Date of sample collection | Antigen detection | No. animals tested | No. antibody-positive animals | |||
|---|---|---|---|---|---|---|---|
| Specimen type | RT-PCR | Antigen ELISA | SP-O ELISA | NSP ELISA | |||
| A | Nov 28 | S, V, H | + | O serotype | 10 | 2 | 0 |
| B | Nov 28 | S, V, H | + | O serotype | 10 | 2 | 0 |
| A | Nov 29 | Serum | + | ND | 90 | 3 | 0 |
| B | Nov 29 | Serum | + | ND | 40 | 1 | 0 |
| C | Dec 1 | Serum | – | ND | 20 | 0 | 0 |
| D | Dec 1 | Serum | – | ND | 20 | 10 | 0 |
| E | Dec 1 | Serum | – | ND | 41 | 17 | 7 |
*FMDV, foot-and-mouth disease virus; RT-PCR, reverse transcription PCR; SP-O, structural protein of FMDV serotype O; NSP, FMDV nonstructural protein; S, saliva; V, vesicle; H, detached hooves; +, positive; ND, not done; –, negative.
Figure 1Progress of foot-and-mouth disease transmission throughout South Korea during 2010–2011 outbreak. Circles indicate cases in swine at index farms; black dots, cases in cattle. A timeline of case detection is provided in online Technical Appendix Figure 1 (wwwnc.cdc.gov/EID/article/19/4/1-1320-Techapp1.pdf). IC, Incheon; GG, Gyeonggi; GW, Gangwon; CN, Chungnam; CB, Chungbuk; GB, Gyeongbuk; GN, Gyeongnam; JN, Jeonnam; JB, Jeonbuk; DG, Daegu.
Figure 2Phylogenetic analysis of viral protein 1 sequences of serotype O foot-and-mouth disease viruses isolated in South Korea (black dots) and other Asian countries, 2010. The tree was constructed by using the neighbor-joining method in MEGA5 (www.megasoftware.net). Percentages in which the associated taxa clustered together in the bootstrap test (1,000 replicates) are shown next to the branches. Scale bar indicates nucleotide substitutions per site. CHA, China; HKN, Hong Kong; JPN, Japan; RUS, Russia; SKR or KOR, South Korea; VN, Vietnam.
Comparison of VP1 amino acids of foot-and-mouth disease isolates from South Korea versus viruses originating in other countries in Southeast Asia, 2010
| Group and strain | Country | Region and province | Date of collection | Similarities of VP1, % |
| Alignment of major differences in VP1 amino acids by position | Genbank accession no. | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| nt | aa | 58 | 139 | 141 | 152 | 157 | 184 | ||||||
| I | |||||||||||||
| O/Andong/SKR/2010 | South Korea | Andong, Gyeongbuk | Nov 28 | Ref | Ref | S | S | P | Q | R | T | JQ070321 | |
| O/PJ/SKR/2010 | South Korea | Paju, Gyeonggi | Dec 15 | 99.22 | 100.0 | – | – | – | – | – | – | This study | |
| O/YC/SKR/2010 | South Korea | Yeoncheon, Gyeonggi | Dec 15 | 99.22 | 100.0 | – | – | – | – | – | – | This study | |
| O/PC/SKR/2010 | South Korea | Pyeongchang, Gangwon | Dec 21 | 99.06 | 99.53 | – | – | – | – | – | – | This study | |
| O/GH/SKR/2010 | South Korea | Ganghwa, Incheon | Dec 24 | 99.22 | 100.0 | – | – | – | – | – | – | This study | |
| O/BY/CHA/2010 | China | Shenzhen, Guangdong | Mar 4 | 98.75 | 100.0 | – | – | – | – | – | – | JN998085 | |
| O/CHA/31/2010 | China | NA | Feb 22 | 98.90 | 100.0 |
| – | – | – | – | – | – | JF792356 |
| II | |||||||||||||
| O/DY/CHA/2010 | China | NA | NA | 97.65 | 97.18 | – | P | – | – | – | – | HQ652078 | |
| O/RUS/Jul 2010 | Russia | Abagaytuy, Zabajkal’skijkray | Jul | 99.06 | 99.06 |
| – | P | – | – | – | – | JQ070329 |
| III | |||||||||||||
| O/HKN/7/2010 | China | Hong Kong | Feb 22 | 99.06 | 99.53 | P | – | – | – | – | – | JQ070303 | |
| O/HKN/9/2010 | China | Hong Kong | Feb 24 | 98.9 | 99.53 |
| P | – | – | – | – | – | JQ070304 |
| IV | |||||||||||||
| O/JPN/MZ1/2010 | Japan | Miyazaki | May | 98.90 | 99.06 | – | – | – | P | – | A | AB618503 | |
| O/TZ/CHA/2010 | China | NA | NA | 98.44 | 99.06 |
| – | – | – | P | – | A | HQ652081 |
| V | |||||||||||||
| O/VN/YB08/2010 | Vietnam | Yen Bai | Feb | 98.28 | 99.06 | P | – | T | – | – | – | HQ26078 | |
| O/GZ/CHA/2010 | China | NA | Mar | 98.59 | 98.12 | P | – | T | – | – | – | JN998086 | |
| O/NC/CHA/2010 | China | NA | NA | 97.97 | 98.59 | P | – | T | – | – | – | HQ652080 | |
| O/MY/CHA/2010 | China | NA | NA | 98.59 | 99.06 |
| P | – | T | – | – | – | HQ652079 |
| VI | |||||||||||||
| O/KOR/1/2010 | South Korea | Ganghwa, Incheon | Apr 8 | 98.44 | 99.06 | P | – | – | – | W | – | HM143846 | |
| O/KOR/10/2010 | South Korea | Cheonyang, Chungnam | Apr 30 | 98.44 | 98.59 | P | – | S | – | W | – | This study | |
| O/KOR/11/2010 | South Korea | Cheonyang, Chungnam | May 6 | 98.44 | 98.59 | P | – | S | – | W | – | This study | |
*Groups are based on major differences in amino acids. VP1, viral protein 1; nt, nucleotides; aa, amino acids; SKR or KOR, South Korea; ref, referent; –, no difference; CHA, China; NA, not available; RUS, Russia; HKN, Hong Kong; JPN, Japan; VN, Vietnam.