Literature DB >> 23627739

Novel approach to excited-state calculations of large molecules based on divide-and-conquer method: application to photoactive yellow protein.

Takeshi Yoshikawa1, Masato Kobayashi, Atsuhiko Fujii, Hiromi Nakai.   

Abstract

In this study, the divide-and-conquer (DC) method is extended to configuration-interaction singles, time-dependent density functional, and symmetry-adapted cluster configuration interaction (SACCI) theories for enabling excited-state calculations of large systems. In DC-based excited-state theories, one subsystem is selected as the excitation subsystem and analyzed via excited-state calculations. Test calculations for formaldehyde in water and a conjugated aldehyde demonstrate the high accuracy and effectiveness of these methods. To demonstrate the efficiency of the method, we calculated the π-π* excited state of photoactive yellow protein (PYP). The numerical applications to PYP confirm that the DC-SACCI method significantly accelerates the excited-state calculations while maintaining high accuracy.

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Year:  2013        PMID: 23627739     DOI: 10.1021/jp401819d

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  1 in total

1.  Fragment-Based Quantum Mechanical Calculation of Excited-State Properties of Fluorescent RNAs.

Authors:  Chenfei Shen; Xianwei Wang; Xiao He
Journal:  Front Chem       Date:  2021-12-22       Impact factor: 5.221

  1 in total

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