Literature DB >> 23625694

Lipase in aqueous-polar organic solvents: activity, structure, and stability.

Md Zahid Kamal1, Poornima Yedavalli, Mandar V Deshmukh, Nalam Madhusudhana Rao.   

Abstract

Studying alterations in biophysical and biochemical behavior of enzymes in the presence of organic solvents and the underlying cause(s) has important implications in biotechnology. We investigated the effects of aqueous solutions of polar organic solvents on ester hydrolytic activity, structure and stability of a lipase. Relative activity of the lipase monotonically decreased with increasing concentration of acetone, acetonitrile, and DMF but increased at lower concentrations (upto ~20% v/v) of dimethylsulfoxide, isopropanol, and methanol. None of the organic solvents caused any appreciable structural change as evident from circular dichorism and NMR studies, thus do not support any significant role of enzyme denaturation in activity change. Change in 2D [15N, 1H]-HSQC chemical shifts suggested that all the organic solvents preferentially localize to a hydrophobic patch in the active-site vicinity and no chemical shift perturbation was observed for residues present in protein's core. This suggests that activity alteration might be directly linked to change in active site environment only. All organic solvents decreased the apparent binding of substrate to the enzyme (increased Km ); however significantly enhanced the kcat . Melting temperature (Tm ) of lipase, measured by circular dichroism and differential scanning calorimetry, altered in all solvents, albeit to a variable extent. Interestingly, although the effect of all organic solvents on various properties on lipase is qualitatively similar, our study suggest that magnitudes of effects do not appear to follow bulk solvent properties like polarity and the solvent effects are apparently dictated by specific and local interactions of solvent molecule(s) with the protein.
Copyright © 2013 The Protein Society.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 23625694      PMCID: PMC3719085          DOI: 10.1002/pro.2271

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  35 in total

Review 1.  Recent trends in protease-catalyzed peptide synthesis.

Authors:  C Lombard; J Saulnier; J M Wallach
Journal:  Protein Pept Lett       Date:  2005-10       Impact factor: 1.890

2.  Steric effects and solvent effects on SN2 reactions.

Authors:  Yongho Kim; Christopher J Cramer; Donald G Truhlar
Journal:  J Phys Chem A       Date:  2009-08-13       Impact factor: 2.781

3.  Organic solvent binding to crystalline subtilisin1 in mostly aqueous media and in the neat solvents.

Authors:  J L Schmitke; L J Stern; A M Klibanov
Journal:  Biochem Biophys Res Commun       Date:  1998-07-20       Impact factor: 3.575

4.  Enzymatic catalysis in nonaqueous solvents.

Authors:  A Zaks; A M Klibanov
Journal:  J Biol Chem       Date:  1988-03-05       Impact factor: 5.157

5.  Enzyme-catalyzed processes in organic solvents.

Authors:  A Zaks; A M Klibanov
Journal:  Proc Natl Acad Sci U S A       Date:  1985-05       Impact factor: 11.205

6.  Structural stability and solvent denaturation of myoglobin.

Authors:  T T Herskovits; H Jaillet
Journal:  Science       Date:  1969-01-17       Impact factor: 47.728

7.  The effect of water on enzyme action in organic media.

Authors:  A Zaks; A M Klibanov
Journal:  J Biol Chem       Date:  1988-06-15       Impact factor: 5.157

8.  Protein determination in membrane and lipoprotein samples: manual and automated procedures.

Authors:  M A Markwell; S M Haas; N E Tolbert; L L Bieber
Journal:  Methods Enzymol       Date:  1981       Impact factor: 1.600

9.  The crystal structure of Bacillus subtilis lipase: a minimal alpha/beta hydrolase fold enzyme.

Authors:  G van Pouderoyen; T Eggert; K E Jaeger; B W Dijkstra
Journal:  J Mol Biol       Date:  2001-05-25       Impact factor: 5.469

10.  Catalytic activity and denaturation of enzymes in water/organic cosolvent mixtures. Alpha-chymotrypsin and laccase in mixed water/alcohol, water/glycol and water/formamide solvents.

Authors:  V V Mozhaev; Y L Khmelnitsky; M V Sergeeva; A B Belova; N L Klyachko; A V Levashov; K Martinek
Journal:  Eur J Biochem       Date:  1989-10-01
View more
  18 in total

1.  Free and Substrate-Immobilised Lipases from Fusarium verticillioides P24 as a Biocatalyst for Hydrolysis and Transesterification Reactions.

Authors:  Janaina Pires Borges; José Carlos Quilles Junior; Thiago Hideyuki Kobe Ohe; Ana Lucia Ferrarezi; Christiane da Costa Carreira Nunes; Mauricio Boscolo; Eleni Gomes; Daniela Alonso Bocchini; Roberto da Silva
Journal:  Appl Biochem Biotechnol       Date:  2020-08-18       Impact factor: 2.926

2.  Effect of organic solvents on the structure and activity of moderately halophilic Bacillus sp. EMB9 protease.

Authors:  Rajeshwari Sinha; S K Khare
Journal:  Extremophiles       Date:  2014-08-19       Impact factor: 2.395

3.  Using Molecular Simulation to Guide Protein Engineering for Biocatalysis in Organic Solvents.

Authors:  Haiyang Cui; Markus Vedder; Ulrich Schwaneberg; Mehdi D Davari
Journal:  Methods Mol Biol       Date:  2022

4.  Identification and Heterologous Production of a Lipase from Geobacillus kaustophilus DSM 7263T and Tailoring Its N-Terminal by a His-Tag Epitope.

Authors:  F İnci Özdemir; Ahmet Tülek; Davut Erdoğan
Journal:  Protein J       Date:  2021-04-15       Impact factor: 2.371

Review 5.  Endophytic fungi: a potential source of industrial enzyme producers.

Authors:  Fatima Bhadra; Anu Gupta; M Vasundhara; M Sudhakara Reddy
Journal:  3 Biotech       Date:  2022-03-03       Impact factor: 2.406

6.  Efficient resolution of 3-aryloxy-1,2-propanediols using CLEA-YCJ01 with high enantioselectivity.

Authors:  Bin Wang; Bin Wu; Bingfang He
Journal:  RSC Adv       Date:  2019-05-03       Impact factor: 4.036

7.  Enhancement of laccase activity by pre-incubation with organic solvents.

Authors:  Meng-Hsuan Wu; Meng-Chun Lin; Cheng-Chung Lee; Su-May Yu; Andrew H-J Wang; Tuan-Hua David Ho
Journal:  Sci Rep       Date:  2019-07-05       Impact factor: 4.379

8.  The Effect of Dimethyl Sulfoxide on the Lysozyme Unfolding Kinetics, Thermodynamics, and Mechanism.

Authors:  Timur Magsumov; Alisa Fatkhutdinova; Timur Mukhametzyanov; Igor Sedov
Journal:  Biomolecules       Date:  2019-09-29

9.  Molecular, biochemical and kinetic analysis of a novel, thermostable lipase (LipSm) from Stenotrophomonas maltophilia Psi-1, the first member of a new bacterial lipase family (XVIII).

Authors:  Maria Parapouli; Athanasios Foukis; Panagiota-Yiolanda Stergiou; Maria Koukouritaki; Panagiotis Magklaras; Olga A Gkini; Emmanuel M Papamichael; Amalia-Sofia Afendra; Efstathios Hatziloukas
Journal:  J Biol Res (Thessalon)       Date:  2018-02-08       Impact factor: 1.889

10.  Tailoring recombinant lipases: keeping the His-tag favors esterification reactions, removing it favors hydrolysis reactions.

Authors:  Janaina Marques de Almeida; Vivian Rotuno Moure; Marcelo Müller-Santos; Emanuel Maltempi de Souza; Fábio Oliveira Pedrosa; David Alexander Mitchell; Nadia Krieger
Journal:  Sci Rep       Date:  2018-07-03       Impact factor: 4.379

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.