Literature DB >> 23625463

Gene expression profiling and association studies implicate the neuregulin signaling pathway in Behçet's disease susceptibility.

Joana M Xavier1, Tiago Krug, Fereydoun Davatchi, Farhad Shahram, Benedita V Fonseca, Gorete Jesus, Filipe Barcelos, Joana Vedes, Manuel Salgado, Bahar Sadeghi Abdollahi, Abdolhadi Nadji, Maria Francisca Moraes-Fontes, Niloofar Mojarad Shafiee, Fahmida Ghaderibarmi, José Vaz Patto, Jorge Crespo, Sofia A Oliveira.   

Abstract

Behçet's disease (BD) is a complex disease with genetic and environmental risk factors implicated in its etiology; however, its pathophysiology is poorly understood. To decipher BD's genetic underpinnings, we combined gene expression profiling with pathway analysis and association studies. We compared the gene expression profiles in peripheral blood mononuclear cells (PBMCs) of 15 patients and 14 matched controls using Affymetrix microarrays and found that the neuregulin signaling pathway was over-represented among the differentially expressed genes. The Epiregulin (EREG), Amphiregulin (AREG), and Neuregulin-1 (NRG1) genes of this pathway stand out as they are also among the top differentially expressed genes. Twelve haplotype tagging SNPs at the EREG-AREG locus and 15 SNPs in NRG1 found associated in at least one published BD genome-wide association study were tested for association with BD in a dataset of 976 Iranian patients and 839 controls. We found a novel association with BD for the rs6845297 SNP located downstream of EREG, and replicated three associations at NRG1 (rs4489285, rs383632, and rs1462891). Multifactor dimensionality reduction analysis indicated the existence of epistatic interactions between EREG and NRG1 variants. EREG-AREG and NRG1, which are members of the epidermal growth factor (EGF) family, seem to modulate BD susceptibility through main effects and gene-gene interactions. These association findings support a role for the EGF/ErbB signaling pathway in BD pathogenesis that warrants further investigation and highlight the importance of combining genetic and genomic approaches to dissect the genetic architecture of complex diseases.

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Year:  2013        PMID: 23625463     DOI: 10.1007/s00109-013-1022-4

Source DB:  PubMed          Journal:  J Mol Med (Berl)        ISSN: 0946-2716            Impact factor:   4.599


  26 in total

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Authors:  A Brazma; P Hingamp; J Quackenbush; G Sherlock; P Spellman; C Stoeckert; J Aach; W Ansorge; C A Ball; H C Causton; T Gaasterland; P Glenisson; F C Holstege; I F Kim; V Markowitz; J C Matese; H Parkinson; A Robinson; U Sarkans; S Schulze-Kremer; J Stewart; R Taylor; J Vilo; M Vingron
Journal:  Nat Genet       Date:  2001-12       Impact factor: 38.330

2.  Genome-wide association studies identify IL23R-IL12RB2 and IL10 as Behçet's disease susceptibility loci.

Authors:  Nobuhisa Mizuki; Akira Meguro; Masao Ota; Shigeaki Ohno; Tomoko Shiota; Tatsukata Kawagoe; Norihiko Ito; Jiro Kera; Eiichi Okada; Keisuke Yatsu; Yeong-Wook Song; Eun-Bong Lee; Nobuyoshi Kitaichi; Kenichi Namba; Yukihiro Horie; Mitsuhiro Takeno; Sunao Sugita; Manabu Mochizuki; Seiamak Bahram; Yoshiaki Ishigatsubo; Hidetoshi Inoko
Journal:  Nat Genet       Date:  2010-07-11       Impact factor: 38.330

Review 3.  Computational analysis of gene-gene interactions using multifactor dimensionality reduction.

Authors:  Jason H Moore
Journal:  Expert Rev Mol Diagn       Date:  2004-11       Impact factor: 5.225

4.  Role of epiregulin in peptidoglycan-induced proinflammatory cytokine production by antigen presenting cells.

Authors:  Shigeru Sugiyama; Kazuhiko Nakabayashi; Iwai Baba; Takehiko Sasazuki; Senji Shirasawa
Journal:  Biochem Biophys Res Commun       Date:  2005-11-11       Impact factor: 3.575

5.  Amphiregulin messenger RNA is elevated in psoriatic epidermis and gastrointestinal carcinomas.

Authors:  P W Cook; M R Pittelkow; W W Keeble; R Graves-Deal; R J Coffey; G D Shipley
Journal:  Cancer Res       Date:  1992-06-01       Impact factor: 12.701

6.  Genome-wide association study identifies GIMAP as a novel susceptibility locus for Behcet's disease.

Authors:  Yun Jong Lee; Yukihiro Horie; Graham R Wallace; Yong Seok Choi; Ji Ah Park; Ji Yong Choi; Ran Song; Young-Mo Kang; Seong Wook Kang; Han Joo Baek; Nobuyoshi Kitaichi; Akira Meguro; Nobuhisa Mizuki; Kenichi Namba; Susumu Ishida; Jinhyun Kim; Edyta Niemczyk; Eun Young Lee; Yeong Wook Song; Shigeaki Ohno; Eun Bong Lee
Journal:  Ann Rheum Dis       Date:  2012-10-06       Impact factor: 19.103

Review 7.  Etiopathogenesis of Behçet's disease with emphasis on the role of immunological aberrations.

Authors:  Violetta D Kapsimali; Meletios A Kanakis; George A Vaiopoulos; Phaedon G Kaklamanis
Journal:  Clin Rheumatol       Date:  2010-05-22       Impact factor: 2.980

8.  Identification of a susceptibility locus in STAT4 for Behçet's disease in Han Chinese in a genome-wide association study.

Authors:  Shengping Hou; Zhenglin Yang; Liping Du; Zhengxuan Jiang; Qinmeng Shu; Yuanyuan Chen; Fuzhen Li; Qingyun Zhou; Shigeaki Ohno; Rui Chen; Aize Kijlstra; James T Rosenbaum; Peizeng Yang
Journal:  Arthritis Rheum       Date:  2012-12

9.  Blood transcriptional signatures of multiple sclerosis: unique gene expression of disease activity.

Authors:  Anat Achiron; Michael Gurevich; Nir Friedman; Naftali Kaminski; Mathilda Mandel
Journal:  Ann Neurol       Date:  2004-03       Impact factor: 10.422

10.  Suprabasal expression of human amphiregulin in the epidermis of transgenic mice induces a severe, early-onset, psoriasis-like skin pathology: expression of amphiregulin in the basal epidermis is also associated with synovitis.

Authors:  Paul W Cook; Jeffrey R Brown; Kenneth A Cornell; Mark R Pittelkow
Journal:  Exp Dermatol       Date:  2004-06       Impact factor: 3.960

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  5 in total

1.  Activation of the JAK/STAT pathway in Behcet's disease.

Authors:  A Tulunay; M G Dozmorov; F Ture-Ozdemir; V Yilmaz; E Eksioglu-Demiralp; F Alibaz-Oner; G Ozen; J D Wren; G Saruhan-Direskeneli; A H Sawalha; H Direskeneli
Journal:  Genes Immun       Date:  2014-11-20       Impact factor: 2.676

2.  Predisposition to Behçet's disease and VKH syndrome by genetic variants of miR-182.

Authors:  Hongsong Yu; Yunjia Liu; Lin Bai; Aize Kijlstra; Peizeng Yang
Journal:  J Mol Med (Berl)       Date:  2014-05-08       Impact factor: 4.599

3.  Behçet's: A Disease or a Syndrome? Answer from an Expression Profiling Study.

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Journal:  PLoS One       Date:  2016-02-18       Impact factor: 3.240

4.  Polymorphism in the EREG gene confers susceptibility to tuberculosis.

Authors:  Wen Cao; Liu-Lin Luo; Wei-Wei Chen; Li Liang; Ran-Ran Zhang; Yan-Lin Zhao; Jin Chen; Jun Yue
Journal:  BMC Med Genet       Date:  2019-01-11       Impact factor: 2.103

5.  Novel Insights Into Gene Signatures and Their Correlation With Immune Infiltration of Peripheral Blood Mononuclear Cells in Behcet's Disease.

Authors:  Haoting Zhan; Haolong Li; Linlin Cheng; Songxin Yan; Wenjie Zheng; Yongzhe Li
Journal:  Front Immunol       Date:  2021-12-15       Impact factor: 7.561

  5 in total

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