Literature DB >> 23624676

Metabolomics: is it useful for inflammatory bowel diseases?

Martin Storr1, Hans J Vogel, Rudolf Schicho.   

Abstract

PURPOSE OF REVIEW: The assessment of metabolite profiles in biofluids has become a powerful method for the detection of biomarker molecules and disease mechanisms. This review outlines the recent advances in the use of metabolomic techniques to study inflammatory bowel diseases (IBDs). RECENT
FINDINGS: The last few years have seen an increase in the studies of experimental and human IBD focusing on the search for small metabolites, such as amino acids, bases, and tricarboxylic acid cycle intermediates. Experimental methods for the screening of metabolites in serum, urine, fecal extracts, and colon tissue include H NMR spectroscopy, gas chromatography-mass spectrometry, and liquid chromatography methods. Several studies demonstrate that IBD patients and healthy individuals, as well as the IBD subtypes, can be distinguished using metabolic profiling. Metabolomic data of fecal extracts and urine have revealed disruptions in bacterial populations, findings that are indicative of a possible involvement of the microbiome in the development of IBDs.
SUMMARY: Metabolites from biofluids can be detected in IBDs by different experimental methods that allow successful separation of IBD subtypes from healthy cohorts. Knowledge of a unique metabolomic fingerprint in IBDs could be useful for diagnosis, treatment, and detection of disease mechanisms.

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Year:  2013        PMID: 23624676      PMCID: PMC3693066          DOI: 10.1097/MOG.0b013e328361f488

Source DB:  PubMed          Journal:  Curr Opin Gastroenterol        ISSN: 0267-1379            Impact factor:   3.287


  44 in total

1.  Diagnosis of ulcerative colitis before onset of inflammation by multivariate modeling of genome-wide gene expression data.

Authors:  Jørgen Olsen; Thomas A Gerds; Jakob B Seidelin; Claudio Csillag; Jacob T Bjerrum; Jesper T Troelsen; Ole Haagen Nielsen
Journal:  Inflamm Bowel Dis       Date:  2009-07       Impact factor: 5.325

2.  Rapid and noninvasive metabonomic characterization of inflammatory bowel disease.

Authors:  Julian R Marchesi; Elaine Holmes; Fatima Khan; Sunil Kochhar; Pauline Scanlan; Fergus Shanahan; Ian D Wilson; Yulan Wang
Journal:  J Proteome Res       Date:  2007-02       Impact factor: 4.466

3.  Metabolite profiling of plasma and urine from rats with TNBS-induced acute colitis using UPLC-ESI-QTOF-MS-based metabonomics--a pilot study.

Authors:  Xiaojun Zhang; Franky F K Choi; Yan Zhou; Feung P Leung; Shun Tan; Shuhai Lin; Hongxi Xu; Wei Jia; Joseph J Y Sung; Zongwei Cai; Zhaoxiang Bian
Journal:  FEBS J       Date:  2012-05-22       Impact factor: 5.542

Review 4.  The fundamental basis of inflammatory bowel disease.

Authors:  Warren Strober; Ivan Fuss; Peter Mannon
Journal:  J Clin Invest       Date:  2007-03       Impact factor: 14.808

5.  Similarity in the metabolic profile in macroscopically involved and un-involved colonic mucosa in patients with inflammatory bowel disease: an in vitro proton ((1)H) MR spectroscopy study.

Authors:  Uma Sharma; Rajiv R Singh; Vineet Ahuja; Govind K Makharia; Naranamangalam R Jagannathan
Journal:  Magn Reson Imaging       Date:  2010-04-24       Impact factor: 2.546

6.  Duodenal infusion of donor feces for recurrent Clostridium difficile.

Authors:  Els van Nood; Anne Vrieze; Max Nieuwdorp; Susana Fuentes; Erwin G Zoetendal; Willem M de Vos; Caroline E Visser; Ed J Kuijper; Joep F W M Bartelsman; Jan G P Tijssen; Peter Speelman; Marcel G W Dijkgraaf; Josbert J Keller
Journal:  N Engl J Med       Date:  2013-01-16       Impact factor: 91.245

7.  Metabolomics reveals metabolic biomarkers of Crohn's disease.

Authors:  Janet Jansson; Ben Willing; Marianna Lucio; Ages Fekete; Johan Dicksved; Jonas Halfvarson; Curt Tysk; Philippe Schmitt-Kopplin
Journal:  PLoS One       Date:  2009-07-28       Impact factor: 3.240

8.  Characterization of inflammatory bowel disease with urinary metabolic profiling.

Authors:  Horace R T Williams; I Jane Cox; David G Walker; Bernard V North; Venisha M Patel; Sara E Marshall; Derek P Jewell; Subrata Ghosh; Huw J W Thomas; Julian P Teare; Simon Jakobovits; Sebastian Zeki; Kenneth I Welsh; Simon D Taylor-Robinson; Timothy R Orchard
Journal:  Am J Gastroenterol       Date:  2009-04-28       Impact factor: 10.864

9.  Serum metabolomics in a Helicobacter hepaticus mouse model of inflammatory bowel disease reveal important changes in the microbiome, serum peptides, and intermediary metabolism.

Authors:  Kun Lu; Charles G Knutson; John S Wishnok; James G Fox; Steven R Tannenbaum
Journal:  J Proteome Res       Date:  2012-09-27       Impact factor: 4.466

10.  Novel, objective, multivariate biomarkers composed of plasma amino acid profiles for the diagnosis and assessment of inflammatory bowel disease.

Authors:  Tadakazu Hisamatsu; Susumu Okamoto; Masaki Hashimoto; Takahiko Muramatsu; Ayatoshi Andou; Michihide Uo; Mina T Kitazume; Katsuyoshi Matsuoka; Tomoharu Yajima; Nagamu Inoue; Takanori Kanai; Haruhiko Ogata; Yasushi Iwao; Minoru Yamakado; Ryosei Sakai; Nobukazu Ono; Toshihiko Ando; Manabu Suzuki; Toshifumi Hibi
Journal:  PLoS One       Date:  2012-01-31       Impact factor: 3.240

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  22 in total

Review 1.  Current tecniques and new perpectives research of magnetic resonance enterography in pediatric Crohn's disease.

Authors:  Gabriele Masselli; Ilaria Mastroiacovo; Emidio De Marco; Giulia Francione; Emanuele Casciani; Elisabetta Polettini; Gianfranco Gualdi
Journal:  World J Radiol       Date:  2016-07-28

Review 2.  New Biomarkers for Diagnosing Inflammatory Bowel Disease and Assessing Treatment Outcomes.

Authors:  Edward L Barnes; Robert Burakoff
Journal:  Inflamm Bowel Dis       Date:  2016-12       Impact factor: 5.325

3.  PepT1-knockout mice harbor a protective metabolome beneficial for intestinal wound healing.

Authors:  Junsik Sung; Lixin Wang; Dingpei Long; Chunhua Yang; Didier Merlin
Journal:  Am J Physiol Gastrointest Liver Physiol       Date:  2021-03-24       Impact factor: 4.052

Review 4.  Differential diagnosis in inflammatory bowel disease colitis: state of the art and future perspectives.

Authors:  Gian Eugenio Tontini; Maurizio Vecchi; Luca Pastorelli; Markus F Neurath; Helmut Neumann
Journal:  World J Gastroenterol       Date:  2015-01-07       Impact factor: 5.742

5.  The gut metagenomics and metabolomics signature in patients with inflammatory bowel disease.

Authors:  Xinwei Xu; Dickson Kofi Wiredu Ocansey; Sanhua Hang; Bo Wang; Samuel Amoah; Chengxue Yi; Xu Zhang; Lianqin Liu; Fei Mao
Journal:  Gut Pathog       Date:  2022-06-21       Impact factor: 5.324

6.  Integrative Analysis of the Inflammatory Bowel Disease Serum Metabolome Improves Our Understanding of Genetic Etiology and Points to Novel Putative Therapeutic Targets.

Authors:  Antonio F Di'Narzo; Sander M Houten; Roman Kosoy; Ruiqi Huang; Frédéric M Vaz; Ruixue Hou; Gabrielle Wei; Wenhui Wang; Phillip H Comella; Tetyana Dodatko; Eduard Rogatsky; Aleksandar Stojmirovic; Carrie Brodmerkel; Jacqueline Perrigoue; Amy Hart; Mark Curran; Joshua R Friedman; Jun Zhu; Manasi Agrawal; Judy Cho; Ryan Ungaro; Marla C Dubinsky; Bruce E Sands; Mayte Suárez-Fariñas; Eric E Schadt; Jean-Frédéric Colombel; Andrew Kasarskis; Ke Hao; Carmen Argmann
Journal:  Gastroenterology       Date:  2021-11-13       Impact factor: 33.883

Review 7.  Urinary metabolites as noninvasive biomarkers of gastrointestinal diseases: A clinical review.

Authors:  Irene Sarosiek; Rudolf Schicho; Pedro Blandon; Mohammad Bashashati
Journal:  World J Gastrointest Oncol       Date:  2016-05-15

Review 8.  Diagnostic and Prognostic Microbial Biomarkers in Inflammatory Bowel Diseases.

Authors:  Marla Dubinsky; Jonathan Braun
Journal:  Gastroenterology       Date:  2015-08-15       Impact factor: 22.682

Review 9.  Small molecule signaling, regulation, and potential applications in cellular therapeutics.

Authors:  Monica P McNerney; Mark P Styczynski
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2017-09-28

10.  Italian cohort of patients affected by inflammatory bowel disease is characterised by variation in glycerophospholipid, free fatty acids and amino acid levels.

Authors:  Antonio Murgia; Christine Hinz; Sonia Liggi; Jùlìa Denes; Zoe Hall; James West; Maria Laura Santoru; Cristina Piras; Cristina Manis; Paolo Usai; Luigi Atzori; Julian L Griffin; Pierluigi Caboni
Journal:  Metabolomics       Date:  2018-10-10       Impact factor: 4.290

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