Literature DB >> 23624393

Locating QTLs controlling several adult root traits in an elite Chinese hybrid rice.

Yong Shu Liang1, Xiao Deng Zhan, Hui Mming Wang, Zhi Qiang Gao, Ze chuan Lin, Dai Bo Chen, Xi Hong Shen, Li Yong Cao, Shi Hua Cheng.   

Abstract

This study aimed to elucidate the genetics of the adult root system in elite Chinese hybrid rice. Several adult root traits in a recombinant inbred line (RIL) population of Xieyou 9308 and two backcross F1 (BCF1) populations derived from the RILs were phenotyped under hydroponic culture at heading stage for quantitative trait locus (QTL) mapping and other statistical analysis. There a total of eight QTLs detected for the root traits. Among of them, a pleiotropic QTL was repeatedly flanked by RM180 and RM5436 on the short arm of chromosome 7 for multiple traits across RILs and its BCF1 populations, accounting for 6.88% to 25.26% of the phenotypic variances. Only additive/dominant QTLs were detected for the root traits. These results can serve as a foundation for facilitating future cloning and molecular breeding.
Copyright © 2013 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  BCF(1); CIM; MIM; Molecular mapping; Oryza sativa L.; QTL; Quantitative trait locus; RD; RDW; RIL; RIL and BCF(1) populations; RL; RSA; RT; RV; Root; SSR; TRL; XBR; XQZB; XQZB/RILs; Xieqingzao; ZH9308; ZH9308/RILs; ZHR; Zhonghui 9308; backcross F(1); broad-sense heritability; composite interval mapping; h(2)(B); multiple interval mapping; number of root tips; quantitative trait loci; recombinant inbred line; root diameter; root dry weight; root length; root surface area; root volume; simple sequence repeat; total root length

Mesh:

Year:  2013        PMID: 23624393     DOI: 10.1016/j.gene.2013.04.010

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  8 in total

1.  Genetic analysis of root morphological traits in wheat.

Authors:  Maria Petrarulo; Daniela Marone; Pina Ferragonio; Luigi Cattivelli; Diego Rubiales; Pasquale De Vita; Anna Maria Mastrangelo
Journal:  Mol Genet Genomics       Date:  2014-11-22       Impact factor: 3.291

2.  Pinpointing genomic regions associated with root system architecture in rice through an integrative meta-analysis approach.

Authors:  Parisa Daryani; Hadi Darzi Ramandi; Sara Dezhsetan; Raheleh Mirdar Mansuri; Ghasem Hosseini Salekdeh; Zahra-Sadat Shobbar
Journal:  Theor Appl Genet       Date:  2021-10-08       Impact factor: 5.699

3.  Mapping Quantitative Trait Loci Associated with Toot Traits Using Sequencing-Based Genotyping Chromosome Segment Substitution Lines Derived from 9311 and Nipponbare in Rice (Oryza sativa L.).

Authors:  Yong Zhou; Guichun Dong; Yajun Tao; Chen Chen; Bin Yang; Yue Wu; Zefeng Yang; Guohua Liang; Baohe Wang; Yulong Wang
Journal:  PLoS One       Date:  2016-03-24       Impact factor: 3.240

4.  Genetic control of the root system in rice under normal and drought stress conditions by genome-wide association study.

Authors:  Xiaokai Li; Zilong Guo; Yan Lv; Xiang Cen; Xipeng Ding; Hua Wu; Xianghua Li; Jianping Huang; Lizhong Xiong
Journal:  PLoS Genet       Date:  2017-07-07       Impact factor: 5.917

5.  Mapping QTL for Root and Shoot Morphological Traits in a Durum Wheat × T. dicoccum Segregating Population at Seedling Stage.

Authors:  Anna Iannucci; Daniela Marone; Maria Anna Russo; Pasquale De Vita; Vito Miullo; Pina Ferragonio; Antonio Blanco; Agata Gadaleta; Anna Maria Mastrangelo
Journal:  Int J Genomics       Date:  2017-08-06       Impact factor: 2.326

6.  Root Transcriptomic Analysis Revealing the Importance of Energy Metabolism to the Development of Deep Roots in Rice (Oryza sativa L.).

Authors:  Qiaojun Lou; Liang Chen; Hanwei Mei; Kai Xu; Haibin Wei; Fangjun Feng; Tiemei Li; Xiaomeng Pang; Caiping Shi; Lijun Luo; Yang Zhong
Journal:  Front Plant Sci       Date:  2017-07-26       Impact factor: 5.753

7.  An investigation of genotype-phenotype association in a festulolium forage grass population containing genome-spanning Festuca pratensis chromosome segments in a Lolium perenne background.

Authors:  John Harper; Dagmara Gasior; Ros Mathews; Ann Thomas; Caron Evans; Julie King; Ian King; Mike Humphreys; Ian Armstead
Journal:  PLoS One       Date:  2018-11-14       Impact factor: 3.240

8.  Genetic variation for maize root architecture in response to drought stress at the seedling stage.

Authors:  Rongyao Li; Yijin Zeng; Jie Xu; Qi Wang; Fengkai Wu; Moju Cao; Hai Lan; Yaxi Liu; Yanli Lu
Journal:  Breed Sci       Date:  2015-09-01       Impact factor: 2.086

  8 in total

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