Literature DB >> 23615875

Comparative study of non-invasive force and stress inference methods in tissue.

S Ishihara1, K Sugimura, S J Cox, I Bonnet, Y Bellaïche, F Graner.   

Abstract

In the course of animal development, the shape of tissue emerges in part from mechanical and biochemical interactions between cells. Measuring stress in tissue is essential for studying morphogenesis and its physical constraints. For that purpose, a possible new approach is force inference (up to a single prefactor) from cell shapes and connectivity. It is non-invasive and can provide space-time maps of stress in a whole tissue, unlike existing methods. To validate this approach, three force-inference methods, which differ in their approach of treating indefiniteness in an inverse problem between cell shapes and forces, were compared. Tests using two artificial and two experimental data sets consistently indicate that our Bayesian force inference, by which cell-junction tensions and cell pressures are simultaneously estimated, performs best in terms of accuracy and robustness. Moreover, by measuring the stress anisotropy and relaxation, we cross-validated the force inference and the global annular ablation of tissue, each of which relies on different prefactors. A practical choice of force-inference methods in different systems of interest is discussed.

Mesh:

Year:  2013        PMID: 23615875     DOI: 10.1140/epje/i2013-13045-8

Source DB:  PubMed          Journal:  Eur Phys J E Soft Matter        ISSN: 1292-8941            Impact factor:   1.890


  31 in total

1.  Pectin-induced changes in cell wall mechanics underlie organ initiation in Arabidopsis.

Authors:  Alexis Peaucelle; Siobhan A Braybrook; Laurent Le Guillou; Emeric Bron; Cris Kuhlemeier; Herman Höfte
Journal:  Curr Biol       Date:  2011-10-06       Impact factor: 10.834

2.  Introducing the scanning air puff tonometer for biological studies.

Authors:  Vincent Fleury; Alia Al-Kilani; Olena P Boryskina; Annemiek J M Cornelissen; Thi-Hanh Nguyen; Mathieu Unbekandt; Loïc Leroy; Georges Baffet; Ferdinand le Noble; Olivier Sire; Elodie Lahaye; Vincent Burgaud
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2010-02-22

3.  Mechanics and remodelling of cell packings in epithelia.

Authors:  D B Staple; R Farhadifar; J-C Röper; B Aigouy; S Eaton; F Jülicher
Journal:  Eur Phys J E Soft Matter       Date:  2010-11-17       Impact factor: 1.890

4.  The influence of cell mechanics, cell-cell interactions, and proliferation on epithelial packing.

Authors:  Reza Farhadifar; Jens-Christian Röper; Benoit Aigouy; Suzanne Eaton; Frank Jülicher
Journal:  Curr Biol       Date:  2007-12-18       Impact factor: 10.834

5.  Physical modeling of cell geometric order in an epithelial tissue.

Authors:  Sascha Hilgenfeldt; Sinem Erisken; Richard W Carthew
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-11       Impact factor: 11.205

6.  Tissue deformation modulates twist expression to determine anterior midgut differentiation in Drosophila embryos.

Authors:  Nicolas Desprat; Willy Supatto; Philippe-Alexandre Pouille; Emmanuel Beaurepaire; Emmanuel Farge
Journal:  Dev Cell       Date:  2008-09       Impact factor: 12.270

Review 7.  Force generation, transmission, and integration during cell and tissue morphogenesis.

Authors:  Thomas Lecuit; Pierre-François Lenne; Edwin Munro
Journal:  Annu Rev Cell Dev Biol       Date:  2011-07-05       Impact factor: 13.827

Review 8.  Geometrical models for cells in tissues.

Authors:  H Honda
Journal:  Int Rev Cytol       Date:  1983

9.  Video force microscopy reveals the mechanics of ventral furrow invagination in Drosophila.

Authors:  G Wayne Brodland; Vito Conte; P Graham Cranston; Jim Veldhuis; Sriram Narasimhan; M Shane Hutson; Antonio Jacinto; Florian Ulrich; Buzz Baum; Mark Miodownik
Journal:  Proc Natl Acad Sci U S A       Date:  2010-12-02       Impact factor: 11.205

10.  Mechanical stress inference for two dimensional cell arrays.

Authors:  Kevin K Chiou; Lars Hufnagel; Boris I Shraiman
Journal:  PLoS Comput Biol       Date:  2012-05-17       Impact factor: 4.475

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  24 in total

Review 1.  Mechanical Forces and Growth in Animal Tissues.

Authors:  Loïc LeGoff; Thomas Lecuit
Journal:  Cold Spring Harb Perspect Biol       Date:  2015-08-10       Impact factor: 10.005

2.  Practical aspects of the cellular force inference toolkit (CellFIT).

Authors:  Jim H Veldhuis; David Mashburn; M Shane Hutson; G Wayne Brodland
Journal:  Methods Cell Biol       Date:  2015-01-08       Impact factor: 1.441

3.  Direct laser manipulation reveals the mechanics of cell contacts in vivo.

Authors:  Kapil Bambardekar; Raphaël Clément; Olivier Blanc; Claire Chardès; Pierre-François Lenne
Journal:  Proc Natl Acad Sci U S A       Date:  2015-01-20       Impact factor: 11.205

Review 4.  Taking the strain: quantifying the contributions of all cell behaviours to changes in epithelial shape.

Authors:  Guy B Blanchard
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-05-19       Impact factor: 6.237

5.  Inferring cellular forces from image stacks.

Authors:  Jim H Veldhuis; Ahmad Ehsandar; Jean-Léon Maître; Takashi Hiiragi; Simon Cox; G Wayne Brodland
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-05-19       Impact factor: 6.237

6.  Kalman Inversion Stress Microscopy.

Authors:  Vincent Nier; Grégoire Peyret; Joseph d'Alessandro; Shuji Ishihara; Benoit Ladoux; Philippe Marcq
Journal:  Biophys J       Date:  2018-09-25       Impact factor: 4.033

7.  Unified quantitative characterization of epithelial tissue development.

Authors:  Boris Guirao; Stéphane U Rigaud; Floris Bosveld; Anaïs Bailles; Jesús López-Gay; Shuji Ishihara; Kaoru Sugimura; François Graner; Yohanns Bellaïche
Journal:  Elife       Date:  2015-12-12       Impact factor: 8.140

Review 8.  Mechanics of tissue compaction.

Authors:  Hervé Turlier; Jean-Léon Maître
Journal:  Semin Cell Dev Biol       Date:  2015-08-06       Impact factor: 7.727

Review 9.  Using cell deformation and motion to predict forces and collective behavior in morphogenesis.

Authors:  Matthias Merkel; M Lisa Manning
Journal:  Semin Cell Dev Biol       Date:  2016-08-02       Impact factor: 7.727

Review 10.  A toolbox to explore the mechanics of living embryonic tissues.

Authors:  Otger Campàs
Journal:  Semin Cell Dev Biol       Date:  2016-04-06       Impact factor: 7.727

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