Literature DB >> 23612608

Amyloid-β-neuropeptide interactions assessed by ion mobility-mass spectrometry.

Molly T Soper1, Alaina S DeToma, Suk-Joon Hyung, Mi Hee Lim, Brandon T Ruotolo.   

Abstract

Recently, small peptides have been shown to modulate aggregation and toxicity of the amyloid-β protein (Aβ). As such, these new scaffolds may help discover a new class of biotherapeutics useful in the treatment of Alzheimer's disease. Many of these inhibitory peptide sequences have been derived from natural sources or from Aβ itself (e.g., C-terminal Aβ fragments). In addition, much earlier work indicates that tachykinins, a broad class of neuropeptides, display neurotrophic properties, presumably through direct interactions with either Aβ or its receptors. Based on this work, we undertook a limited screen of neuropeptides using ion mobility-mass spectrometry to search for similar such peptides with direct Aβ binding properties. Our results reveal that the neuropeptides leucine enkephalin (LE) and galanin interact with both the monomeric and small oligomeric forms of Aβ(1-40) to create a range of complexes having diverse stoichiometries, while some tachyknins (i.e., substance P) do not. LE interacts with Aβ more strongly than galanin, and we utilized ion mobility-mass spectrometry, molecular dynamics simulations, gel electrophoresis/Western blot, and transmission electron microscopy to study the influence of this peptide on the structure of Aβ monomer, small Aβ oligomers, as well as the eventual formation of Aβ fibrils. We find that LE binds selectively within a region of Aβ between its N-terminal tail and hydrophobic core. Furthermore, our data indicate that LE modulates fibril generation, producing shorter fibrillar aggregates when added in stoichiometric excess relative to Aβ.

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Year:  2013        PMID: 23612608      PMCID: PMC3664942          DOI: 10.1039/c3cp50721a

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  56 in total

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6.  Endogenous proteins controlling amyloid beta-peptide polymerization. Possible implications for beta-amyloid formation in the central nervous system and in peripheral tissues.

Authors:  B Bohrmann; L Tjernberg; P Kuner; S Poli; B Levet-Trafit; J Näslund; G Richards; W Huber; H Döbeli; C Nordstedt
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7.  Amyloid-β protein oligomerization and the importance of tetramers and dodecamers in the aetiology of Alzheimer's disease.

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  13 in total

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3.  Ion Mobility-Mass Spectrometry Reveals a Dipeptide That Acts as a Molecular Chaperone for Amyloid β.

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4.  Mechanistic insights into the switch of αB-crystallin chaperone activity and self-multimerization.

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5.  Mechanism of C-Terminal Fragments of Amyloid β-Protein as Aβ Inhibitors: Do C-Terminal Interactions Play a Key Role in Their Inhibitory Activity?

Authors:  Xueyun Zheng; Chun Wu; Deyu Liu; Huiyuan Li; Gal Bitan; Joan-Emma Shea; Michael T Bowers
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6.  Synthetic Flavonoids, Aminoisoflavones: Interaction and Reactivity with Metal-Free and Metal-Associated Amyloid-β Species.

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7.  1,2,3,4,6-penta-O-galloyl-β-D-glucopyranose Binds to the N-terminal Metal Binding Region to Inhibit Amyloid β-protein Oligomer and Fibril Formation.

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9.  SERF engages in a fuzzy complex that accelerates primary nucleation of amyloid proteins.

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10.  Opposing Effects of Cucurbit[7]uril and 1,2,3,4,6-Penta-O-galloyl-β-d-glucopyranose on Amyloid β25-35 Assembly.

Authors:  Natália E C de Almeida; Thanh D Do; Michael Tro; Nichole E LaPointe; Stuart C Feinstein; Joan-Emma Shea; Michael T Bowers
Journal:  ACS Chem Neurosci       Date:  2015-12-10       Impact factor: 5.780

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