Literature DB >> 23609442

Dynamic structure of the translocon SecYEG in membrane: direct single molecule observations.

Raghavendar Reddy Sanganna Gari1, Nathan C Frey1, Chunfeng Mao2, Linda L Randall2, Gavin M King3.   

Abstract

Purified SecYEG was reconstituted into liposomes and studied in near-native conditions using atomic force microscopy. These SecYEG proteoliposomes were active in translocation assays. Changes in the structure of SecYEG as a function of time were directly visualized. The dynamics observed were significant in magnitude (∼1-10 Å) and were attributed to the two large loops of SecY linking transmembrane helices 6-7 and 8-9. In addition, we identified a distribution between monomers and dimers of SecYEG as well as a smaller population of higher order oligomers. This work provides a new vista of the flexible and dynamic structure of SecYEG, an intricate and vital membrane protein.

Keywords:  Atomic Force Microscopy; Membrane Biophysics; Membrane Proteins; Protein Conformation; Protein Dynamics; Protein Export; Secretion; Structural Biology

Mesh:

Substances:

Year:  2013        PMID: 23609442      PMCID: PMC3675617          DOI: 10.1074/jbc.M113.471870

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  38 in total

1.  An essential amino acid residue in the protein translocation channel revealed by targeted random mutagenesis of SecY.

Authors:  H Mori; K Ito
Journal:  Proc Natl Acad Sci U S A       Date:  2001-04-17       Impact factor: 11.205

2.  High resolution AFM topographs of the Escherichia coli water channel aquaporin Z.

Authors:  S Scheuring; P Ringler; M Borgnia; H Stahlberg; D J Müller; P Agre; A Engel
Journal:  EMBO J       Date:  1999-09-15       Impact factor: 11.598

3.  SecYEG assembles into a tetramer to form the active protein translocation channel.

Authors:  E H Manting; C van Der Does; H Remigy; A Engel; A J Driessen
Journal:  EMBO J       Date:  2000-03-01       Impact factor: 11.598

4.  Speeding molecular recognition by using the folding funnel: the fly-casting mechanism.

Authors:  B A Shoemaker; J J Portman; P G Wolynes
Journal:  Proc Natl Acad Sci U S A       Date:  2000-08-01       Impact factor: 11.205

5.  The SecYEG preprotein translocation channel is a conformationally dynamic and dimeric structure.

Authors:  Pascal Bessonneau; Véronique Besson; Ian Collinson; Franck Duong
Journal:  EMBO J       Date:  2002-03-01       Impact factor: 11.598

Review 6.  SecB, one small chaperone in the complex milieu of the cell.

Authors:  L L Randall; S J S Hardy
Journal:  Cell Mol Life Sci       Date:  2002-10       Impact factor: 9.261

7.  X-ray structure of a protein-conducting channel.

Authors:  Bert Van den Berg; William M Clemons; Ian Collinson; Yorgo Modis; Enno Hartmann; Stephen C Harrison; Tom A Rapoport
Journal:  Nature       Date:  2003-12-03       Impact factor: 49.962

8.  Reconstitution of membrane proteins into liposomes.

Authors:  Jean-Louis Rigaud; Daniel Lévy
Journal:  Methods Enzymol       Date:  2003       Impact factor: 1.600

9.  Atomic force microscope.

Authors: 
Journal:  Phys Rev Lett       Date:  1986-03-03       Impact factor: 9.161

10.  Binding, activation and dissociation of the dimeric SecA ATPase at the dimeric SecYEG translocase.

Authors:  Franck Duong
Journal:  EMBO J       Date:  2003-09-01       Impact factor: 11.598

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  17 in total

1.  Stoichiometry of SecYEG in the active translocase of Escherichia coli varies with precursor species.

Authors:  Chunfeng Mao; Carl E Cheadle; Simon J S Hardy; Angela A Lilly; Yuying Suo; Raghavendar Reddy Sanganna Gari; Gavin M King; Linda L Randall
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-01       Impact factor: 11.205

2.  Atomic Force Microscopy Reveals Membrane Protein Activity at the Single Molecule Level.

Authors:  Kanokporn Chattrakun; Katherine G Schaefer; Lucas S Chandler; Brendan P Marsh; Gavin M King
Journal:  Methods Mol Biol       Date:  2021

Review 3.  Protein export through the bacterial Sec pathway.

Authors:  Alexandra Tsirigotaki; Jozefien De Geyter; Nikolina Šoštaric; Anastassios Economou; Spyridoula Karamanou
Journal:  Nat Rev Microbiol       Date:  2016-11-28       Impact factor: 60.633

4.  Quaternary structure of the small amino acid transporter OprG from Pseudomonas aeruginosa.

Authors:  Raghavendar Reddy Sanganna Gari; Patrick Seelheim; Brendan Marsh; Volker Kiessling; Carl E Creutz; Lukas K Tamm
Journal:  J Biol Chem       Date:  2018-09-20       Impact factor: 5.157

Review 5.  The Sec System: Protein Export in Escherichia coli.

Authors:  Jennine M Crane; Linda L Randall
Journal:  EcoSal Plus       Date:  2017-11

6.  Controllable membrane remodeling by a modified fragment of the apoptotic protein Bax.

Authors:  Katherine G Schaefer; Brayan Grau; Nicolas Moore; Ismael Mingarro; Gavin M King; Francisco N Barrera
Journal:  Faraday Discuss       Date:  2021-12-24       Impact factor: 4.008

7.  Lipids Activate SecA for High Affinity Binding to the SecYEG Complex.

Authors:  Sabrina Koch; Janny G de Wit; Iuliia Vos; Jan Peter Birkner; Pavlo Gordiichuk; Andreas Herrmann; Antoine M van Oijen; Arnold J M Driessen
Journal:  J Biol Chem       Date:  2016-09-09       Impact factor: 5.157

8.  A Barley Efflux Transporter Operates in a Na+-Dependent Manner, as Revealed by a Multidisciplinary Platform.

Authors:  Yagnesh Nagarajan; Jay Rongala; Sukanya Luang; Abhishek Singh; Nadim Shadiac; Julie Hayes; Tim Sutton; Matthew Gilliham; Stephen D Tyerman; Gordon McPhee; Nicolas H Voelcker; Haydyn D T Mertens; Nigel M Kirby; Jung-Goo Lee; Yaroslava G Yingling; Maria Hrmova
Journal:  Plant Cell       Date:  2015-12-15       Impact factor: 11.277

9.  Identification of YidC residues that define interactions with the Sec Apparatus.

Authors:  Zaoping Li; Dana Boyd; Martin Reindl; Marcia B Goldberg
Journal:  J Bacteriol       Date:  2013-11-01       Impact factor: 3.490

Review 10.  Engineering protocells: prospects for self-assembly and nanoscale production-lines.

Authors:  David M Miller; Jacqueline M Gulbis
Journal:  Life (Basel)       Date:  2015-03-25
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