Literature DB >> 23606482

Dyadobacter tibetensis sp. nov., isolated from glacial ice core.

Liang Shen1, Yongqin Liu1, Tandong Yao1, Ninglian Wang2, Baiqing Xu1, Nianzhi Jiao3, Hongcan Liu4, Yuguang Zhou4, Xiaobo Liu1, Yanan Wang5.   

Abstract

A Gram-stain-negative, rod-shaped, aerobic, non-motile bacterium, designated Y620-1(T), was isolated from a glacier on the Tibetan Plateau, China. The 16S rRNA gene sequence of the novel isolate shared 93.6-95.1 % similarity with type strains of species of the genus Dyadobacter. The major fatty acids of strain Y620-1(T) were summed feature 3 (C16 : 1ω7c and/or iso-C15 : 0 2-OH), iso-C15 : 0, C16 : 1ω5c and iso-C17 : 0 3-OH. The predominant isoprenoid quinone and polar lipid were MK-7 and phosphatidylethanolamine (PE), respectively. The DNA G+C content was 44.4±0.3 mol% (Tm). Flexirubin-type pigment was produced. The novel isolate was classified in the genus Dyadobacter, but a number of phenotypic characteristics distinguished the novel isolate from type strains of species of the genus Dyadobacter. From these genotypic and phenotypic data, it is evident that strain Y620-1(T) represents a novel species of the genus Dyadobacter, for which the name Dyadobacter tibetensis sp. nov. is proposed. The type strain is Y620-1(T) ( = JCM 18589(T) = CGMCC 1.12215(T)).

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Year:  2013        PMID: 23606482     DOI: 10.1099/ijs.0.050328-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  4 in total

1.  Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes.

Authors:  Marina García-López; Jan P Meier-Kolthoff; Brian J Tindall; Sabine Gronow; Tanja Woyke; Nikos C Kyrpides; Richard L Hahnke; Markus Göker
Journal:  Front Microbiol       Date:  2019-09-23       Impact factor: 5.640

2.  Dyadobacter diqingensis sp. nov., isolated from Baima snow mountain of Diqing Tibetan Autonomous Prefecture in Yunnan province, south-west China.

Authors:  Lei Ran; Man Peng; Wei-Qun Wang; Yu-Zhou Feng; Juan Wang; Yu Wang; Cui-Ying Li; Xin-Xing Liu; Wei-Xun Chunyu; Shu-Kun Tang
Journal:  Arch Microbiol       Date:  2022-08-25       Impact factor: 2.667

3.  Variation with depth of the abundance, diversity and pigmentation of culturable bacteria in a deep ice core from the Yuzhufeng Glacier, Tibetan Plateau.

Authors:  Liang Shen; Yongqin Liu; Ninglian Wang; Nianzhi Jiao; Baiqing Xu; Xiaobo Liu
Journal:  Extremophiles       Date:  2017-10-25       Impact factor: 2.395

4.  Draft genome sequence of Dyadobacter tibetensis type strain (Y620-1) isolated from glacial ice.

Authors:  Yongqin Liu; Anyi Hu; Liang Shen; Tandong Yao; Nianzhi Jiao; Ninglian Wang; Baiqing Xu
Journal:  Stand Genomic Sci       Date:  2014-03-15
  4 in total

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