Literature DB >> 23600697

Architecture and assembly of the Gram-positive cell wall.

Morgan Beeby1, James C Gumbart, Benoît Roux, Grant J Jensen.   

Abstract

The bacterial cell wall is a mesh polymer of peptidoglycan--linear glycan strands cross-linked by flexible peptides--that determines cell shape and provides physical protection. While the glycan strands in thin 'Gram-negative' peptidoglycan are known to run circumferentially around the cell, the architecture of the thicker 'Gram-positive' form remains unclear. Using electron cryotomography, here we show that Bacillus subtilis peptidoglycan is a uniformly dense layer with a textured surface. We further show it rips circumferentially, curls and thickens at free edges, and extends longitudinally when denatured. Molecular dynamics simulations show that only atomic models based on the circumferential topology recapitulate the observed curling and thickening, in support of an 'inside-to-outside' assembly process. We conclude that instead of being perpendicular to the cell surface or wrapped in coiled cables (two alternative models), the glycan strands in Gram-positive cell walls run circumferentially around the cell just as they do in Gram-negative cells. Together with providing insights into the architecture of the ultimate determinant of cell shape, this study is important because Gram-positive peptidoglycan is an antibiotic target crucial to the viability of several important rod-shaped pathogens including Bacillus anthracis, Listeria monocytogenes, and Clostridium difficile.
© 2013 John Wiley & Sons Ltd.

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Year:  2013        PMID: 23600697      PMCID: PMC3663049          DOI: 10.1111/mmi.12203

Source DB:  PubMed          Journal:  Mol Microbiol        ISSN: 0950-382X            Impact factor:   3.501


  33 in total

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Authors:  James C Phillips; Rosemary Braun; Wei Wang; James Gumbart; Emad Tajkhorshid; Elizabeth Villa; Christophe Chipot; Robert D Skeel; Laxmikant Kalé; Klaus Schulten
Journal:  J Comput Chem       Date:  2005-12       Impact factor: 3.376

Review 2.  The selective value of bacterial shape.

Authors:  Kevin D Young
Journal:  Microbiol Mol Biol Rev       Date:  2006-09       Impact factor: 11.056

Review 3.  Peptidoglycan structure and architecture.

Authors:  Waldemar Vollmer; Didier Blanot; Miguel A de Pedro
Journal:  FEMS Microbiol Rev       Date:  2008-01-08       Impact factor: 16.408

4.  Markov random field based automatic image alignment for electron tomography.

Authors:  Fernando Amat; Farshid Moussavi; Luis R Comolli; Gal Elidan; Kenneth H Downing; Mark Horowitz
Journal:  J Struct Biol       Date:  2007-07-28       Impact factor: 2.867

5.  Cell wall peptidoglycan architecture in Bacillus subtilis.

Authors:  Emma J Hayhurst; Lekshmi Kailas; Jamie K Hobbs; Simon J Foster
Journal:  Proc Natl Acad Sci U S A       Date:  2008-09-10       Impact factor: 11.205

6.  Peptidoglycan remodeling and conversion of an inner membrane into an outer membrane during sporulation.

Authors:  Elitza I Tocheva; Eric G Matson; Dylan M Morris; Farshid Moussavi; Jared R Leadbetter; Grant J Jensen
Journal:  Cell       Date:  2011-09-02       Impact factor: 41.582

7.  Three-dimensional structure of the bacterial cell wall peptidoglycan.

Authors:  Samy O Meroueh; Krisztina Z Bencze; Dusan Hesek; Mijoon Lee; Jed F Fisher; Timothy L Stemmler; Shahriar Mobashery
Journal:  Proc Natl Acad Sci U S A       Date:  2006-03-09       Impact factor: 11.205

8.  Arrangement of glycan chains in the sacculus of Escherichia coli.

Authors:  R W Verwer; N Nanninga; W Keck; U Schwarz
Journal:  J Bacteriol       Date:  1978-11       Impact factor: 3.490

9.  Molecular organization of Gram-negative peptidoglycan.

Authors:  Lu Gan; Songye Chen; Grant J Jensen
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-24       Impact factor: 11.205

10.  Electron cryotomography of bacterial cells.

Authors:  Songye Chen; Alasdair McDowall; Megan J Dobro; Ariane Briegel; Mark Ladinsky; Jian Shi; Elitza I Tocheva; Morgan Beeby; Martin Pilhofer; H Jane Ding; Zhuo Li; Lu Gan; Dylan M Morris; Grant J Jensen
Journal:  J Vis Exp       Date:  2010-05-06       Impact factor: 1.355

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  43 in total

1.  Coarse-grained simulations of bacterial cell wall growth reveal that local coordination alone can be sufficient to maintain rod shape.

Authors:  Lam T Nguyen; James C Gumbart; Morgan Beeby; Grant J Jensen
Journal:  Proc Natl Acad Sci U S A       Date:  2015-06-30       Impact factor: 11.205

2.  Uncharacterized Bacterial Structures Revealed by Electron Cryotomography.

Authors:  Megan J Dobro; Catherine M Oikonomou; Aidan Piper; John Cohen; Kylie Guo; Taylor Jensen; Jahan Tadayon; Joseph Donermeyer; Yeram Park; Benjamin A Solis; Andreas Kjær; Andrew I Jewett; Alasdair W McDowall; Songye Chen; Yi-Wei Chang; Jian Shi; Poorna Subramanian; Cristina V Iancu; Zhuo Li; Ariane Briegel; Elitza I Tocheva; Martin Pilhofer; Grant J Jensen
Journal:  J Bacteriol       Date:  2017-08-08       Impact factor: 3.490

3.  Diamide Inhibitors of the Bacillus subtilis N-Acetylglucosaminidase LytG That Exhibit Antibacterial Activity.

Authors:  Saman Nayyab; Mary O'Connor; Jennifer Brewster; James Gravier; Mitchell Jamieson; Ethan Magno; Ryan D Miller; Drew Phelan; Keyana Roohani; Paul Williard; Amit Basu; Christopher W Reid
Journal:  ACS Infect Dis       Date:  2017-05-08       Impact factor: 5.084

Review 4.  Bacterial Cell Mechanics.

Authors:  George K Auer; Douglas B Weibel
Journal:  Biochemistry       Date:  2017-07-11       Impact factor: 3.162

Review 5.  Getting into shape: How do rod-like bacteria control their geometry?

Authors:  Ariel Amir; Sven van Teeffelen
Journal:  Syst Synth Biol       Date:  2014-04-22

Review 6.  A new view into prokaryotic cell biology from electron cryotomography.

Authors:  Catherine M Oikonomou; Yi-Wei Chang; Grant J Jensen
Journal:  Nat Rev Microbiol       Date:  2016-02-29       Impact factor: 60.633

7.  Ultrastructural analysis of bacteriophage Φ29 during infection of Bacillus subtilis.

Authors:  Madeline M Farley; Jiagang Tu; Daniel B Kearns; Ian J Molineux; Jun Liu
Journal:  J Struct Biol       Date:  2016-07-29       Impact factor: 2.867

8.  Distribution of mechanical stress in the Escherichia coli cell envelope.

Authors:  Hyea Hwang; Nicolò Paracini; Jerry M Parks; Jeremy H Lakey; James C Gumbart
Journal:  Biochim Biophys Acta Biomembr       Date:  2018-09-29       Impact factor: 3.747

9.  Reparameterization of Solute-Solute Interactions for Amino Acid-Sugar Systems Using Isopiestic Osmotic Pressure Molecular Dynamics Simulations.

Authors:  Wesley K Lay; Mark S Miller; Adrian H Elcock
Journal:  J Chem Theory Comput       Date:  2017-04-28       Impact factor: 6.006

10.  Peptidoglycan transformations during Bacillus subtilis sporulation.

Authors:  Elitza I Tocheva; Javier López-Garrido; H Velocity Hughes; Jennifer Fredlund; Erkin Kuru; Michael S Vannieuwenhze; Yves V Brun; Kit Pogliano; Grant J Jensen
Journal:  Mol Microbiol       Date:  2013-03-27       Impact factor: 3.501

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