Literature DB >> 23589870

A strategy to capture and characterize the synaptic transcriptome.

Sathyanarayanan V Puthanveettil1, Igor Antonov, Sergey Kalachikov, Priyamvada Rajasethupathy, Yun-Beom Choi, Andrea B Kohn, Mathew Citarella, Fahong Yu, Kevin A Karl, Maxime Kinet, Irina Morozova, James J Russo, Jingyue Ju, Leonid L Moroz, Eric R Kandel.   

Abstract

Here we describe a strategy designed to identify RNAs that are actively transported to synapses during learning. Our approach is based on the characterization of RNA transport complexes carried by molecular motor kinesin. Using this strategy in Aplysia, we have identified 5,657 unique sequences consisting of both coding and noncoding RNAs from the CNS. Several of these RNAs have key roles in the maintenance of synaptic function and growth. One of these RNAs, myosin heavy chain, is critical in presynaptic sensory neurons for the establishment of long-term facilitation, but not for its persistence.

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Year:  2013        PMID： 23589870      PMCID： PMC3645558          DOI： 10.1073/pnas.1304422110

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN： 0027-8424            Impact factor:   11.205


  32 in total

Review 1.  Molecular insights into mRNA transport and local translation in the mammalian nervous system.

Authors:  M A Kiebler; L DesGroseillers
Journal:  Neuron       Date:  2000-01       Impact factor: 17.173

2.  Identification of process-localized mRNAs from cultured rodent hippocampal neurons.

Authors:  Michael M Poon; Sang-Hyun Choi; Christina A M Jamieson; Daniel H Geschwind; Kelsey C Martin
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3.  Velvet: algorithms for de novo short read assembly using de Bruijn graphs.

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4.  Identification of a peptide specific for Aplysia sensory neurons by PCR-based differential screening.

Authors:  J F Brunet; E Shapiro; S A Foster; E R Kandel; Y Iino
Journal:  Science       Date:  1991-05-10       Impact factor: 47.728

5.  Synapse-specific, long-term facilitation of aplysia sensory to motor synapses: a function for local protein synthesis in memory storage.

Authors:  K C Martin; A Casadio; H Zhu; E Yaping; J C Rose; M Chen; C H Bailey; E R Kandel
Journal:  Cell       Date:  1997-12-26       Impact factor: 41.582

6.  A critical period for macromolecular synthesis in long-term heterosynaptic facilitation in Aplysia.

Authors:  P G Montarolo; P Goelet; V F Castellucci; J Morgan; E R Kandel; S Schacher
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Review 7.  Thirty years of olfactory learning and memory research in Drosophila melanogaster.

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Authors:  Leonid L Moroz; Andrea B Kohn
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9.  A neuronal isoform of CPEB regulates local protein synthesis and stabilizes synapse-specific long-term facilitation in aplysia.

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10.  Sustained CPEB-dependent local protein synthesis is required to stabilize synaptic growth for persistence of long-term facilitation in Aplysia.

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  28 in total

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4.  NSF workshop report: discovering general principles of nervous system organization by comparing brain maps across species.

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Review 5.  Building an RNA Sequencing Transcriptome of the Central Nervous System.

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6.  Characterization of the rapid transcriptional response to long-term sensitization training in Aplysia californica.

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7.  Synapse Formation Activates a Transcriptional Program for Persistent Enhancement in the Bi-directional Transport of Mitochondria.

Authors:  Kerriann K Badal; Komol Akhmedov; Phillip Lamoureux; Xin-An Liu; Adrian Reich; Mohammad Fallahi-Sichani; Supriya Swarnkar; Kyle E Miller; Sathyanarayanan V Puthanveettil
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9.  Synaptic generation of an intracellular retrograde signal requires activation of the tyrosine kinase and mitogen-activated protein kinase signaling cascades in Aplysia.

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10.  Unbiased View of Synaptic and Neuronal Gene Complement in Ctenophores: Are There Pan-neuronal and Pan-synaptic Genes across Metazoa?

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