Literature DB >> 23587716

RNA helicases involved in U-insertion/deletion-type RNA editing.

Elisabeth Kruse1, Christin Voigt, W-Matthias Leeder, H Ulrich Göringer.   

Abstract

Mitochondrial pre-messenger RNAs in kinetoplastid protozoa such as the disease-causing African trypanosomes are substrates of a unique RNA editing reaction. The process is characterized by the site-specific insertion and deletion of exclusively U nucleotides and converts nonfunctional pre-mRNAs into translatable transcripts. Similar to other RNA-based metabolic pathways, RNA editing is catalyzed by a macromolecular protein complex, the editosome. Editosomes provide a reactive surface for the individual steps of the catalytic cycle and involve as key players a specific class of small, non-coding RNAs termed guide (g)RNAs. gRNAs basepair proximal to an editing site and act as quasi templates in the U-insertion/deletion reaction. Next to the editosome several accessory proteins and complexes have been identified, which contribute to different steps of the reaction. This includes matchmaking-type RNA/RNA annealing factors as well as RNA helicases of the archetypical DEAD- and DExH/D-box families. Here we summarize the current structural, genetic and biochemical knowledge of the two characterized "editing RNA helicases" and provide an outlook onto dynamic processes within the editing reaction cycle. This article is part of a Special Issue entitled: The Biology of RNA helicases - Modulation for life.
Copyright © 2013 Elsevier B.V. All rights reserved.

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Year:  2013        PMID: 23587716     DOI: 10.1016/j.bbagrm.2013.04.003

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  9 in total

1.  REH2C Helicase and GRBC Subcomplexes May Base Pair through mRNA and Small Guide RNA in Kinetoplastid Editosomes.

Authors:  Vikas Kumar; Bhaskara R Madina; Shelly Gulati; Ajay A Vashisht; Chiedza Kanyumbu; Brittany Pieters; Afzal Shakir; James A Wohlschlegel; Laurie K Read; Blaine H M Mooers; Jorge Cruz-Reyes
Journal:  J Biol Chem       Date:  2016-01-14       Impact factor: 5.157

Review 2.  RNA helicase proteins as chaperones and remodelers.

Authors:  Inga Jarmoskaite; Rick Russell
Journal:  Annu Rev Biochem       Date:  2014-03-12       Impact factor: 23.643

3.  Mutations in TRNT1 cause congenital sideroblastic anemia with immunodeficiency, fevers, and developmental delay (SIFD).

Authors:  Pranesh K Chakraborty; Klaus Schmitz-Abe; Erin K Kennedy; Hapsatou Mamady; Turaya Naas; Danielle Durie; Dean R Campagna; Ashley Lau; Anoop K Sendamarai; Daniel H Wiseman; Alison May; Stephen Jolles; Philip Connor; Colin Powell; Matthew M Heeney; Patricia-Jane Giardina; Robert J Klaassen; Caroline Kannengiesser; Isabelle Thuret; Alexis A Thompson; Laura Marques; Stephen Hughes; Denise K Bonney; Sylvia S Bottomley; Robert F Wynn; Ronald M Laxer; Caterina P Minniti; John Moppett; Victoria Bordon; Michael Geraghty; Paul B M Joyce; Kyriacos Markianos; Adam D Rudner; Martin Holcik; Mark D Fleming
Journal:  Blood       Date:  2014-09-05       Impact factor: 22.113

Review 4.  Dynamic RNA holo-editosomes with subcomplex variants: Insights into the control of trypanosome editing.

Authors:  Jorge Cruz-Reyes; Blaine H M Mooers; Pawan K Doharey; Joshua Meehan; Shelly Gulati
Journal:  Wiley Interdiscip Rev RNA       Date:  2018-08-12       Impact factor: 9.957

5.  Native Variants of the MRB1 Complex Exhibit Specialized Functions in Kinetoplastid RNA Editing.

Authors:  Bhaskara R Madina; Vikas Kumar; Blaine H M Mooers; Jorge Cruz-Reyes
Journal:  PLoS One       Date:  2015-04-30       Impact factor: 3.240

6.  Charge reduction and thermodynamic stabilization of substrate RNAs inhibit RNA editing.

Authors:  W-Matthias Leeder; Andreas J Reuss; Michael Brecht; Katja Kratz; Josef Wachtveitl; H Ulrich Göringer
Journal:  PLoS One       Date:  2015-03-05       Impact factor: 3.240

7.  The RNA chaperone activity of the Trypanosoma brucei editosome raises the dynamic of bound pre-mRNAs.

Authors:  W-Matthias Leeder; Christin Voigt; Michael Brecht; H Ulrich Göringer
Journal:  Sci Rep       Date:  2016-01-19       Impact factor: 4.379

8.  Protein features for assembly of the RNA editing helicase 2 subcomplex (REH2C) in Trypanosome holo-editosomes.

Authors:  Vikas Kumar; Pawan K Doharey; Shelly Gulati; Joshua Meehan; Mary G Martinez; Karrisa Hughes; Blaine H M Mooers; Jorge Cruz-Reyes
Journal:  PLoS One       Date:  2019-04-29       Impact factor: 3.240

9.  DEAH-RHA helicase•Znf cofactor systems in kinetoplastid RNA editing and evolutionarily distant RNA processes.

Authors:  Jorge Cruz-Reyes; Blaine H M Mooers; Zakaria Abu-Adas; Vikas Kumar; Shelly Gulati
Journal:  RNA Dis       Date:  2016-06-06
  9 in total

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