| Literature DB >> 23585860 |
Jesse J Plascak1, James L Fisher.
Abstract
BACKGROUND: Glioma rates vary by demographic factors and geo-political boundaries and this variation suggests higher glioma rates in groups of higher socioeconomic position. The primary goal of this analysis is to investigate the relationship between glioma and county socioeconomic position using U.S. Surveillance Epidemiology and End Results (SEER) data.Entities:
Mesh:
Year: 2013 PMID: 23585860 PMCID: PMC3622005 DOI: 10.1371/journal.pone.0060910
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Histologic breakdown of glioma cases diagnosed within the SEER Program (17 registries), 2000–2006.
| Histology (ICD-O-3 Histology Code | Column % |
| Glioblastoma (9440, 9441, 9442/3) | 51.0% |
| Astrocytoma, NOS (9400) | 7.9% |
| Glioma, NOS (9380) | 7.1% |
| Anaplastic astrocytoma (9401, 9411) | 7.0% |
| Pilocytic astrocytoma (9421) | 5.4% |
| Oligodendroglioma (9450) | 5.4% |
| Ependymoma/anaplastic ependymoma (9391–9394) | 4.2% |
| Embryonal/primitive/medulloblastoma (8963, 9363, 9364, 9470, 9471, 9472, 9473, 9474, 99501, 9502, 9503, 9508) | 3.6% |
| Mixed glioma (9382) | 3.1% |
| Anaplastic oligodendroglioma (9451, 9460) | 2.4% |
| Diffuse astrocytoma (protoplasma, fibrillary) (9410, 9420) | 1.4% |
| Not Brain | 0.7% |
| Unique astrocytoma variants (9383, 9384, 9424) | 0.4% |
| Neuroepithelial (9381, 9423, 9430, 9444) | 0.3% |
| Choroid plexus (9390) | 0.2% |
International Classification of Disease – Oncology – Version 3 [9].
Figure 1Age-adjusted County Glioma Incidence Rates per 100,000 Within the SEER-17 Study Area, 2000–2006.
PCA Factor Loadings of Six SEP Measures of 404 SEER-17 Counties, 1990 and 2000.
| Factor 1 (“SEP”) | Factor 2 | |||
| 1990 | 2000 | 1990 | 2000 | |
| % Variance Explained | 44.0 | 48.1 | 40.4 | 37.5 |
| % <100% Federal Poverty Line |
|
| −0.411 | −0.219 |
| %<High School Education |
|
| −0.453 | −0.328 |
| Median Household Income | − | − |
|
|
| % Unemployed |
|
| 0.081 | 0.183 |
| % Foreign Born | −0.157 | −0.090 |
|
|
| % Urban | −0.150 | −0.111 |
|
|
Log transformed prior to PCA analysis.
Bold: Variables loading heavily on respective factors.
Abbreviations: PCA, Principal component analysis; SEER, Surveillance Epidemiology and End Results; SEP, Socioeconomic position.
Figure 2Socioeconomic Scores (2000 U.S. Census Bureau) for Counties Within the SEER 17 Study Area.
Estimated coefficients, 95% credible intervals, model fit statistics, and Moran’s I values for the two basic models estimating glioma risk using 1990 and 2000 census data.
| Model 1 | Model 2 | |||||||||
| 1990 | 2000 | 1990 | 2000 | |||||||
| Parameter | RR | (95% CI) | RR | (95% CI) | RR | (95% CI) | RR | (95% CI) | ||
| Individual level | ||||||||||
| Intercept | 1.56 | (1.45,1.68) | 1.40 | (1.30,1.51) | 1.76 | (1.43,2.02) | 1.42 | (1.30,1.55) | ||
| Sex | ||||||||||
| Female | Reference | Reference | Reference | Reference | ||||||
| Male | 1.49 | (1.46,1.53) | 1.50 | (1.46,1.53) | 1.50 | (1.46,1.53) | 1.50 | (1.46,1.53) | ||
| Race | ||||||||||
| Black | Reference | Reference | Reference | Reference | ||||||
| White | 2.01 | (1.89,2.14) | 2.00 | (1.88,2.13) | 1.99 | (1.87,2.12) | 1.99 | (1.86,2.11) | ||
| Other | 0.89 | (0.82,0.97) | 0.88 | (0.81,0.96) | 0.89 | (0.82,0.97) | 0.89 | (0.81,0.96) | ||
| Age | ||||||||||
| 25–44 yrs | Reference | Reference | Reference | Reference | ||||||
| 45–64 yrs | 2.38 | (2.30,2.46) | 2.38 | (2.30,2.46) | 2.37 | (2.29,2.46) | 2.37 | (2.29,2.46) | ||
| 65+ yrs | 4.87 | (4.71,5.04) | 4.87 | (4.71,5.04) | 4.86 | (4.69,5.02) | 4.86 | (4.69,5.03) | ||
| County level | ||||||||||
| Socioeconomic Quartile | ||||||||||
| Lowest | Reference | Reference | Reference | Reference | ||||||
| 2nd Lowest | 1.01 | (0.95,1.08) | 1.13 | (1.08,1.19) | 0.85 | (0.73,1.00) | 1.10 | (1.02,1.19) | ||
| 2nd Highest | 0.96 | (0.90,1.02) | 1.15 | (1.09,1.21) | 0.83 | (0.69,1.08) | 1.11 | (1.02,1.20) | ||
| Highest | 1.01 | (0.96,1.05) | 1.19 | (1.13,1.25) | 0.81 | (0.61,1.20) | 1.14 | (1.05,1.23) | ||
| DIC | 11650 | 11620 | 11630 | 11620 | ||||||
| Moran’s I (P-value) | 0.073 | (0.017) | 0.066 | (0.021) | 0.010 | (0.357) | −0.041 | (0.117) | ||
Individual level covariates with a county random intercept+socioeconomic county covariates in a second level.
Model 1+ conditionally autoregressive prior on random intercepts.
Model intercepts may be interpreted as estimated rates per 100,000 among the young adult, black, female subgroup for a ‘typical’ county (a county with estimated random intercept = 0).
Abbreviations: CI, Credible Interval; DIC, Deviance Information Criterion; RR, Rate Ratio.
Figure 3Bar Chart Summary of Estimated Log Rates by Subdemographic and County Random Intercept Decilea,b.
aUnstandardized rates produced from model 2, year 2000 estimates. bDeciles (D1–D10) represent the median random intercept values within each decile of random intercepts.