Literature DB >> 23585039

Next-generation sequencing of the human olfactory receptors.

Joel D Mainland1, Jason R Willer, Hiroaki Matsunami, Nicholas Katsanis.   

Abstract

Humans have approximately 400 intact olfactory receptors (ORs). Among this set there are a large number of variations between individuals, a subset of which affects receptor function and can lead to interindividual variation in olfactory perception. Technological progress and cost erosion in next-generation sequencing have given us the opportunity to determine the sequence of the entire OR gene set with high fidelity and to measure the extent of variation in this functional module across many individuals. Given that whole genome sequencing remains prohibitively expensive for this purpose, especially since the OR sub-genome represents only ~0.0125 % of the human genome, we have designed a targeted capture method to enrich the OR for next-generation sequencing, which we describe here. Using this method we have been able to sequence an individual's OR sub-genome with high coverage, enabling us to identify variation with high sensitivity and specificity. This method can be used to accurate assess the amount of variability in this module and to identify the functional role of individual ORs in olfactory perception.

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Year:  2013        PMID: 23585039     DOI: 10.1007/978-1-62703-377-0_10

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  2 in total

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Journal:  Front Pharmacol       Date:  2022-06-02       Impact factor: 5.988

Review 2.  Cannabinoids Regulate Sensory Processing in Early Olfactory and Visual Neural Circuits.

Authors:  Thomas Heinbockel; Alex Straiker
Journal:  Front Neural Circuits       Date:  2021-07-07       Impact factor: 3.492

  2 in total

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