Literature DB >> 23574308

Water-mediated interactions influence the binding of thapsigargin to sarco/endoplasmic reticulum calcium adenosinetriphosphatase.

Eleonora S Paulsen1, Jesper Villadsen, Eleonora Tenori, Huizhen Liu, Ditte F Bonde, Mette A Lie, Maike Bublitz, Claus Olesen, Henriette E Autzen, Ingrid Dach, Pankaj Sehgal, Poul Nissen, Jesper V Møller, Birgit Schiøtt, S Brøgger Christensen.   

Abstract

A crystal structure suggests four water molecules are present in the binding cavity of thapsigargin in sarco/endoplasmic reticulum calcium ATPase (SERCA). Computational chemistry indicates that three of these water molecules mediate an extensive hydrogen-bonding network between thapsigargin and the backbone of SERCA. The orientation of the thapsigargin molecule in SERCA is crucially dependent on these interactions. The hypothesis has been verified by measuring the affinity of newly synthesized model compounds, which are prevented from participating in such water-mediated interactions as hydrogen-bond donors.

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Year:  2013        PMID: 23574308     DOI: 10.1021/jm4001083

Source DB:  PubMed          Journal:  J Med Chem        ISSN: 0022-2623            Impact factor:   7.446


  6 in total

Review 1.  Targeting thapsigargin towards tumors.

Authors:  Nhu Thi Quynh Doan; Eleonora Sandholdt Paulsen; Pankaj Sehgal; Jesper Vuust Møller; Poul Nissen; Samuel R Denmeade; John T Isaacs; Craig A Dionne; Søren Brøgger Christensen
Journal:  Steroids       Date:  2014-07-24       Impact factor: 2.668

2.  Preexisting domain motions underlie protonation-dependent structural transitions of the P-type Ca2+-ATPase.

Authors:  Eli Fernández-de Gortari; L Michel Espinoza-Fonseca
Journal:  Phys Chem Chem Phys       Date:  2017-04-12       Impact factor: 3.676

3.  From Plant to Patient: Thapsigargin, a Tool for Understanding Natural Product Chemistry, Total Syntheses, Biosynthesis, Taxonomy, ATPases, Cell Death, and Drug Development.

Authors:  Søren Brøgger Christensen; Henrik Toft Simonsen; Nikolai Engedal; Poul Nissen; Jesper Vuust Møller; Samuel R Denmeade; John T Isaacs
Journal:  Prog Chem Org Nat Prod       Date:  2021

4.  Computer modelling reveals new conformers of the ATP binding loop of Na+/K+-ATPase involved in the transphosphorylation process of the sodium pump.

Authors:  Gracian Tejral; Bruno Sopko; Alois Necas; Wilhelm Schoner; Evzen Amler
Journal:  PeerJ       Date:  2017-03-14       Impact factor: 2.984

5.  Rational Design of Benzylidenehydrazinyl-Substituted Thiazole Derivatives as Potent Inhibitors of Human Dihydroorotate Dehydrogenase with in Vivo Anti-arthritic Activity.

Authors:  Shiliang Li; Guoqin Luan; Xiaoli Ren; Wenlin Song; Liuxin Xu; Minghao Xu; Junsheng Zhu; Dong Dong; Yanyan Diao; Xiaofeng Liu; Lili Zhu; Rui Wang; Zhenjiang Zhao; Yufang Xu; Honglin Li
Journal:  Sci Rep       Date:  2015-10-07       Impact factor: 4.379

Review 6.  Linking Biochemical and Structural States of SERCA: Achievements, Challenges, and New Opportunities.

Authors:  Rodrigo Aguayo-Ortiz; L Michel Espinoza-Fonseca
Journal:  Int J Mol Sci       Date:  2020-06-10       Impact factor: 5.923

  6 in total

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