Literature DB >> 23573007

AFLP assessment of genetic diversity among Indian Mucuna accessions.

N Sathyanarayana1, M Leelambika, S Mahesh, Mahammad Jaheer.   

Abstract

Amplified fragment length polymorphism (AFLP) marker was used to assess diversity in germplasm collection of Mucuna species which has gained tremendous attention in the recent past due to its promising nutritional, agronomic and medicinal attributes. Twenty five accessions comprising five species, collected from seven states of India were evaluated with twelve AFLP primer combinations that generated a total of 1,612 fragments with an average of 134 fragments per primer combination. The values of polymorphic information content (PIC), marker index (MI) and the resolving power (Rp) demonstrated the utility of the primer combinations used in the present study for discriminating the Mucuna accessions. UPGMA and Principal coordinate analysis (PCoA) of the genotypic data revealed clustering of accessions as per phenetic and genetic relationships. The Jaccard's similarity coefficient values suggested good variability among the M. pruriens accessions indicating their utility in breeding programs. Molecular diversity presented in this study combined with the datasets on other morphological/agronomic traits will be highly useful for selecting appropriate accessions for plant improvement through conventional as well as molecular breeding approaches and for evolving suitable conservation strategies.

Entities:  

Keywords:  AFLP; Genetic diversity; Molecular characterization; Mucuna species; Velvetbean

Year:  2011        PMID: 23573007      PMCID: PMC3550546          DOI: 10.1007/s12298-011-0058-6

Source DB:  PubMed          Journal:  Physiol Mol Biol Plants        ISSN: 0974-0430


  12 in total

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5.  DNA polymorphisms amplified by arbitrary primers are useful as genetic markers.

Authors:  J G Williams; A R Kubelik; K J Livak; J A Rafalski; S V Tingey
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Journal:  Nucleic Acids Res       Date:  1995-11-11       Impact factor: 16.971

7.  Studies on the nutritional composition and antinutritional factors of three different germplasm seed materials of an under-utilized tropical legume, Mucuna pruriens var. utilis.

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8.  Genetic relationships among perennial and annual Cicer species growing in Turkey assessed by AFLP fingerprinting.

Authors:  M A Sudupak; M S Akkaya; A Kence
Journal:  Theor Appl Genet       Date:  2003-11-06       Impact factor: 5.699

9.  GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research--an update.

Authors:  Rod Peakall; Peter E Smouse
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10.  SSR and AFLP based genetic diversity of soybean germplasm differing in photoperiod sensitivity.

Authors:  Ram K Singh; Virendra S Bhatia; K V Bhat; Trilochan Mohapatra; Nagendra K Singh; Kailash C Bansal; K R Koundal
Journal:  Genet Mol Biol       Date:  2010-06-01       Impact factor: 1.771

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  3 in total

1.  Genetic mapping and QTL analysis of agronomic traits in Indian Mucuna pruriens using an intraspecific F₂population.

Authors:  S Mahesh; M Leelambika; Md Jaheer; A M Anithakumari; N Sathyanarayana
Journal:  J Genet       Date:  2016-03       Impact factor: 1.166

2.  Transcriptomic resources for the medicinal legume Mucuna pruriens: de novo transcriptome assembly, annotation, identification and validation of EST-SSR markers.

Authors:  N Sathyanarayana; Ranjith Kumar Pittala; Pankaj Kumar Tripathi; Ratan Chopra; Heikham Russiachand Singh; Vikas Belamkar; Pardeep Kumar Bhardwaj; Jeff J Doyle; Ashley N Egan
Journal:  BMC Genomics       Date:  2017-05-25       Impact factor: 3.969

3.  Comparative assessment of genetic diversity in Sesamum indicum L. using RAPD and SSR markers.

Authors:  Aejaz Ahmad Dar; Sushma Mudigunda; Pramod Kumar Mittal; Neelakantan Arumugam
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  3 in total

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