Literature DB >> 23566824

A novel approach to automated genotyping of Mycobacterium tuberculosis using a panel of 15 MIRU VNTRs.

Tomoshige Matsumoto1, Yuriko Koshii, Kazu Sakane, Tomomi Murakawa, Yukio Hirayama, Hisako Yoshida, Masashi Kurokawa, Yoshitaka Tamura, Takayuki Nagai, Ichiro Kawase.   

Abstract

In this study, we present a new approach to variable number tandem repeats (VNTR) analysis using the QIAxcel capillary electrophoresis system and a software-integrated peak calling function. Allelic ladders representing 15 mycobacterial interspersed repetitive units (MIRU)-VNTR loci were used to define peak calling tables thereby enabling high precision Mycobacterium tuberculosis strain identification. Crown
Copyright © 2013. Published by Elsevier B.V. All rights reserved.

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Year:  2013        PMID： 23566824     DOI： 10.1016/j.mimet.2013.03.022

Source DB:  PubMed          Journal:  J Microbiol Methods        ISSN： 0167-7012            Impact factor:   2.363


  6 in total

1.  High-throughput mycobacterial interspersed repetitive-unit-variable-number tandem-repeat genotyping for Mycobacterium tuberculosis epidemiological studies.

Authors:  Marie Gauthier; Floriane Bidault; Amandine Mosnier; Nino Bablishvili; Nestani Tukvadze; Silaphet Somphavong; Phimpha Paboriboune; Oksana Ocheretina; Jean William Pape; Glaucia Paranhos-Baccala; Jean-Luc Berland
Journal:  J Clin Microbiol       Date:  2014-11-26       Impact factor: 5.948

2.  A Novel Capillary Electrophoresis-Based High-Throughput Multiplex Polymerase Chain Reaction System for the Simultaneous Detection of Nine Pathogens in Swine.

Authors:  Xu-Long Wu; Lu Xiao; Hua Lin; Miao Yang; Shi-Jie Chen; Wei An; Yin Wang; Xue-Ping Yao; Ze-Xiao Yang; Zi-Zhong Tang
Journal:  Biomed Res Int       Date:  2017-06-11       Impact factor: 3.411

3.  Automated IS6110-based fingerprinting of Mycobacterium tuberculosis: Reaching unprecedented discriminatory power and versatility.

Authors:  Naira Dekhil; Mohamed Amine Skhairia; Besma Mhenni; Saloua Ben Fradj; Rob Warren; Helmi Mardassi
Journal:  PLoS One       Date:  2018-06-01       Impact factor: 3.240

4.  Accuracy of the QIAxcel Automated System for MIRU-VNTR Genotyping of Mycobacterium tuberculosis in Two Limited Resource Settings.

Authors:  Silva Tafaj; Asma Ghariani; Alberto Trovato; Perlat Kapisyzi; Leila Essalah; Emna Mehiri; Gentian Kasmi; Genc Burazeri; Leila Slim Saidi; Daniela Maria Cirillo
Journal:  J Clin Med       Date:  2020-02-01       Impact factor: 4.241

5.  Molecular diversity of Paenibacillus larvae strains isolated from Lithuanian apiaries.

Authors:  Paulina Amšiejute; Vaclovas Jurgelevičius; Petras Mačiulskis; Ceslova Butrimaite-Ambrozevičiene; Simona Pilevičiene; Zygimantas Janeliunas; Tatjana Kutyriova; Ingrida Jacevičiene; Algimantas Paulauskas
Journal:  Front Vet Sci       Date:  2022-08-22

6.  MIRU-VNTR Genotyping of Mycobacterium tuberculosis Strains Using QIAxcel Technology: A Multicentre Evaluation Study.

Authors:  Vladyslav Nikolayevskyy; Alberto Trovato; Agnieszka Broda; Emanuele Borroni; Daniela Cirillo; Francis Drobniewski
Journal:  PLoS One       Date:  2016-03-03       Impact factor: 3.240
  6 in total

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