Literature DB >> 23565993

Enhancer and gene traps for molecular imaging and genetic analysis in zebrafish.

Le A Trinh1, Scott E Fraser.   

Abstract

Enhancer and gene trapping methods are highly effective means for the identification and functional analysis of transcriptionally active genes. With recent advances in fluorescent proteins and transposon based integration technologies, a growing family of trapping approaches has been developed in zebrafish, offering powerful tools to both visualize and functionally dissect gene networks during development. Coupled with the intrinsic advantages of the zebrafish model system, creative genetic engineering of trap vectors has enabled high-resolution molecular imaging and genetic manipulations. This review highlights the different enhancer and gene trap approaches that have been developed in zebrafish and offers insights into the strengths, limitations and experimental strategies for their application to enrich our knowledge of gene function and the cellular processes they control.
© 2013 The Authors Development, Growth & Differentiation © 2013 Japanese Society of Developmental Biologists.

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Year:  2013        PMID: 23565993     DOI: 10.1111/dgd.12055

Source DB:  PubMed          Journal:  Dev Growth Differ        ISSN: 0012-1592            Impact factor:   2.053


  12 in total

1.  Novel strategies for gene trapping and insertional mutagenesis mediated by Sleeping Beauty transposon.

Authors:  Guili Song; Zongbin Cui
Journal:  Mob Genet Elements       Date:  2013-10-02

Review 2.  Protein trap: a new Swiss army knife for geneticists?

Authors:  Svetlana A Fedorova; Natalya V Dorogova
Journal:  Mol Biol Rep       Date:  2019-11-14       Impact factor: 2.316

3.  The Annotation of Zebrafish Enhancer Trap Lines Generated with PB Transposon.

Authors:  Wenzhu Jia; Zhongxia Guan; Shasha Shi; Kuilin Xiang; Peihong Chen; Fen Tan; Numan Ullah; Mohamed Diaby; Mengke Guo; Chengyi Song; Bo Gao
Journal:  Curr Issues Mol Biol       Date:  2022-06-02       Impact factor: 2.976

Review 4.  Learning to Fish with Genetics: A Primer on the Vertebrate Model Danio rerio.

Authors:  Nathalia G Holtzman; M Kathryn Iovine; Jennifer O Liang; Jacqueline Morris
Journal:  Genetics       Date:  2016-07       Impact factor: 4.562

Review 5.  Connecting past and present: single-cell lineage tracing.

Authors:  Cheng Chen; Yuanxin Liao; Guangdun Peng
Journal:  Protein Cell       Date:  2022-04-19       Impact factor: 15.328

6.  Generation of an Enhancer-Trapping Vector for Insertional Mutagenesis in Zebrafish.

Authors:  Chunyan Liu; Guili Song; Lin Mao; Yong Long; Qing Li; Zongbin Cui
Journal:  PLoS One       Date:  2015-10-05       Impact factor: 3.240

7.  Isolation of Novel CreERT2-Driver Lines in Zebrafish Using an Unbiased Gene Trap Approach.

Authors:  Peggy Jungke; Juliane Hammer; Stefan Hans; Michael Brand
Journal:  PLoS One       Date:  2015-06-17       Impact factor: 3.240

8.  Subcellular localisations of the CPTI collection of YFP-tagged proteins in Drosophila embryos.

Authors:  Claire M Lye; Huw W Naylor; Bénédicte Sanson
Journal:  Development       Date:  2014-10       Impact factor: 6.868

9.  Building the vertebrate codex using the gene breaking protein trap library.

Authors:  Noriko Ichino; MaKayla R Serres; Rhianna M Urban; Mark D Urban; Anthony J Treichel; Kyle J Schaefbauer; Lauren E Tallant; Gaurav K Varshney; Kimberly J Skuster; Melissa S McNulty; Camden L Daby; Ying Wang; Hsin-Kai Liao; Suzan El-Rass; Yonghe Ding; Weibin Liu; Jennifer L Anderson; Mark D Wishman; Ankit Sabharwal; Lisa A Schimmenti; Sridhar Sivasubbu; Darius Balciunas; Matthias Hammerschmidt; Steven Arthur Farber; Xiao-Yan Wen; Xiaolei Xu; Maura McGrail; Jeffrey J Essner; Shawn M Burgess; Karl J Clark; Stephen C Ekker
Journal:  Elife       Date:  2020-08-11       Impact factor: 8.713

Review 10.  Imaging Myelination In Vivo Using Transparent Animal Models.

Authors:  Jenea M Bin; David A Lyons
Journal:  Brain Plast       Date:  2016-12-21
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