| Literature DB >> 23565226 |
Natalia Castaño-Rodríguez1, Nadeem O Kaakoush, Khean-Lee Goh, Kwong Ming Fock, Hazel M Mitchell.
Abstract
BACKGROUND: In addition to Helicobacter pylori infection, host genetic factors contribute to gastric cancer (GC). Recognition of H. pylori is known to involve Toll-like receptors (TLR), which subsequently leads to activation of NF-κB. Thus, the overall aim of this study was to estimate for the first time the pooled effect size of polymorphisms in TLR2, TLR4 and CD14 on GC development through a meta-analysis.Entities:
Mesh:
Substances:
Year: 2013 PMID: 23565226 PMCID: PMC3614925 DOI: 10.1371/journal.pone.0060327
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
PCR primer sequences and thermal conditions used for genotyping of CD14 and TLR2 polymorphisms in gastric cancer patients and functional dyspepsia controls.
| Polymorphism | Molecular Technique | Primer | Sequence | Product (bp) | Tma | Tmb | Tmc | Cycles |
|
| Real-time PCR | Forward 1Forward 2Reverse | 5′-TCC CAT GTT TCA GAG AGG GGG A-3′5′-CCC CAT GTT TCA GAG AGG GGG G-3′ | 73 | Stage 2: 95°C for 15 sStage 3: 95°C for 15 s | Stage 2: 69°C for 20 sStage 3: 60°C for 30 s | Stage 2: 72°C for 20 sStage 3: 72°C for 10 s | 1040 |
|
| PCR | ForwardReverse |
| Insertion: 286Deletion:264 | 95° C for 30 s | 62°C for 30 s | 72°C for 1 min | 35 |
Tma: Denaturation temperature, Tmb: Annealing temperature, Tmc: Extension temperature. *The primers were designed using the reverse (bottom) strand.
Medical subject headings and text words used in the literature search strategy.
| Gene | MeSH terms and text words |
|
| “Antigens, CD14” [Majr] OR “CD14” AND “Polymorphism, Genetic” [Mesh] AND “Stomach Neoplasm” [Mesh] OR “gastric cancer” |
|
| “Toll-Like Receptor 4/genetic” [Mesh]) OR “TLR4” AND “Stomach Neoplasm” [Mesh] OR “gastric cancer” |
|
| “Toll-Like Receptor 2” [Mesh]) OR “TLR2” AND “Stomach Neoplasm” [Mesh] OR “gastric cancer” |
MeSH: medical subject headings, NA: not available.
Clinical characteristics of gastric cancer patients and functional dyspepsia controls in our ethnic Chinese case-control study.
| Characteristic | GC cases (N = 70) | FD controls (N = 214) |
| Median age ± SD (years) | 65.8±13.8 | 54.2±13.0 |
| Male/Female N (%) | 42/28 (60/40) | 95/119 (44/56) |
|
| 56 (80) | 134 (63) |
GC: gastric cancer, FD: functional dyspepsia, N: total number, SD: standard deviation.
Association between TLR2, TLR4 and CD14 polymorphisms and risk of gastric cancer in ethnic Chinese individuals.
| Polymorphism | Genotype/Allele | Cases (N = 70) | Controls (N = 214) | OR (95% CI) |
|
|
| ins/insins/deldel/delinsdel | 263678850 | 1019318295129 | 11.50 (0.84–2.68)1.51 (0.57–4.00)11.30 (0.87–1.95) | 0.1900.4300.208 |
|
| GGGCCCGC | 322889244 | 12770632482 | 11.59 (0.88–2.85)5.29 (1.71–16.34)11.89 (1.23–2.92) | 0.1310.0040.005 |
|
| CCCTTTCT | 1838147466 | 3410872176252 | 10.66 (0.34–1.31)0.37 (0.16–0.82)10.62 (0.42–0.91) | 0.2820.0210.018 |
OR: odds ratio, CI: confidence intervals, ins: insertion, del: deletion. *Fisher's exact test two-tailed P-value. † This polymorphism was genotyped only in 69 GC patients and 212 FD controls. ‡ This polymorphism was genotyped only in 68 GC patients and 203 FD controls.
Association between TLR2, TLR4 and CD14 polymorphisms and risk of Helicobacter pylori infection in ethnic Chinese individuals.
| Polymorphism | Genotype/Allele |
|
| OR (95%CI) |
|
|
| ins/insins/deldel/delinsdel | 819019252128 | 4639613151 | 11.31 (0.78–2.21)1.80 (0.67–4.82)11.31 (0.89–1.92) | 0.35340.35620.2084 |
|
| GGGCCCGC | 110621028282 | 5036313642 | 10.78 (0.46–1.33)1.52 (0.40–5.75)10.94 (0.62–1.44) | 0.41470.75660.8278 |
|
| CCCTTTCT | 419755179207 | 11493171111 | 10.53 (0.25–1.12)0.48 (0.21–1.06)10.74 (0.52–1.06) | 0.11450.08570.1038 |
OR: odds ratio, CI: confidence intervals, ins: insertion, del: deletion. * Fisher's exact test two-tailed P-value. † Genotyping information available for only 281 individuals. ‡ Genotyping information available for only 271 individuals.
Effect of Helicobacter pylori infection and TLR2, TLR4 and CD14 polymorphisms on gastric cancer risk.
| HP status |
| Cases | Controls | OR | 95% CI |
|
| HP (−) | CC | 2 | 9 | 1 | ||
| HP (−) | T carrier | 9 | 71 | 0.57 | 0.11–3.10 | 0.6173 |
| HP (+) | CC | 16 | 25 | 2.88 | 0.55–15.09 | 0.2914 |
| HP (+) | T carrier | 43 | 109 | 1.78 | 0.37–8.56 | 0.7289 |
| HP status |
| Cases | Controls | OR | 95% CI | P-value |
| HP (−) | GG | 3 | 47 | 1 | ||
| HP (−) | C carrier | 8 | 31 | 4.04 | 0.99–16.44 | 0.053 |
| HP (+) | GG | 28 | 81 | 5.42 | 1.56–18.79 | 0.0043 |
| HP (+) | C carrier | 28 | 45 | 9.75 | 2.77–34.34 | <0.0001 |
| HP status |
| Cases | Controls | OR | 95% CI | P-value |
| HP (−) | ins/ins | 7 | 39 | 1 | ||
| HP (−) | deletion carrier | 4 | 41 | 0.54 | 0.15–2.00 | 0.5223 |
| HP (+) | ins/ins | 19 | 62 | 1.71 | 0.66–4.44 | 0.3612 |
| HP (+) | deletion carrier | 39 | 70 | 3.10 | 1.27–7.60 | 0.0121 |
HP: Helicobacter pylori, OR: odds ratio, CI: confidence intervals. * Fisher's exact test two-tailed P-value.
Figure 1Flow diagram of included/excluded studies.
Individual studies included in the meta-analysis of TLR2, TLR4 and CD14 polymorphisms and gastric cancer.
| Author | Year | Reference | Population | Location* | Cases | Controls | Total | Polymorphism | OR (95% CI)† | |
| Castaño-Rodriguez et al. | 2012 | Current study | Chinese | Non-cardia | 69‡ | 212‡ | 281 |
| 1.30 (0.87–1.95) | |
| de Oliveira and Silva | 2012 | 41 | Brazilian | NA | 174 | 225 | 399 |
| 1.95 (1.38–2.74) | |
| Zeng et al. | 2011 | 43 | Chinese | NA | 248 | 496 | 744 |
| 0.71 (0.56–0.89) | |
| Hishida et al. | 2010 | 42 | Japanese | NA | 583 | 1097£ | 1680 |
| 1.08 (0.93–1.26) | |
| Tahara et al. | 2007 | 24 | Japanese | Non-cardia | 289 | 455§ | 744 |
| 1.34 (1.07–1.67) | |
| Total | 1364 | 2487 | 3851 |
| ||||||
| de Oliveira and Silva | 2012 | 41 | Brazilian | NA | 174 | 225 | 399 |
| 2.68 (1.24–5.81) | |
|
| 1.97 (0.69–5.57) | |||||||||
| Schmidt et al. | 2011 | 38 | Chinese | Non-cardia | 60 | 162 | 222 |
| 0.15 (0.02–1.15) | |
| Santini et al. | 2008 | 46 | Italian | NA | 171 | 151 | 322 |
| 1.05 (0.46–2.37) | |
|
| 3.90 (1.30–11.72) | |||||||||
| Hold et al.-1 | 2007 | 45 | Caucasian¶ | Non-cardia | 312 | 419 | 731 |
| 2.45 (1.58–3.82) | |
| Hold et al.-2 | 2007 | 45 | CaucasianΔ | Non-cardia | 184 | 211 | 395 |
| 1.85 (1.01–3.40) | |
| Garza-Gonzalez et al. | 2007 | 44 | Mexican | Non-cardia | 78 | 236¥ | 314 |
| 1.07 (0.41–2.77) | |
|
| 0.23 (0.03–1.76) | |||||||||
| Castaño-Rodriguez et al. | 2012 | Current study | Chinese | Non-cardia | 68¤ | 203¤ | 271 |
| 1.89 (1.23–2.92) | |
| Kupcinskas et al. | 2011 | 48 | Caucasians | NA | 113 | 236 | 349 |
| 1.03 (0.62–1.71) | |
| Hishida et al. | 2009 | 47 | Japanese | NA | 583 | 1056≠ | 1639 |
| 0.99 (0.84–1.16) | |
| Total | 979 | 1404 | 2383 |
| ||||||
| 423 | 612 | 1035 |
| |||||||
| 766 | 1506 | 2272 |
| |||||||
| Castaño-Rodriguez et al. | 2012 | Current study | Chinese | Non-cardia | 70 | 214 | 284 |
| 0.62 (0.42–0.91) | |
| Hold et al.-1 | 2009 | 49 | Caucasian¥ | Non-cardia | 327 | 389 | 716 |
| 1.09 (0.89–1.35) | |
| Hold et al.-2 | 2009 | 49 | Caucasian Δ | Non-cardia | 184 | 211 | 395 |
| 0.85 (0.64–1.12) | |
| Tahara et al. | 2007 | 50 | Japanese | Non-cardia | 143 | 94 | 237 |
| 0.71 (0.49–1.02) | |
| Zhao et al. | 2007 | 52 | Chinese | NA | 470 | 470 | 940 |
| 1.26 (1.04–1.52) | |
| Wu et al. | 2006 | 51 | Chinese | Non-cardia | 204 | 210 | 414 |
| 0.98 (0.75–1.29) | |
| Total | 1398 | 1588 | 2986 |
| ||||||
NA: not available, OR: odds ratio, CI: confidence intervals. * GC location according to human stomach anatomy. † OR and 95% CI correspond to TLR2- 196 to -174del, TLR4 Asp299Gly, TLR4 Thr399Ile, TLR4 rs11536889 or CD14 -260 C/T allele analysis. ‡ This polymorphism was genotyped only in 69 gastric cancer patients and 212 functional dyspepsia controls. £ 539 subjects were excluded from the control group since they presented atrophic gastritis. § Non-cancer patients (individuals with normal gastric appearance, gastritis, gastric ulcers and peptic ulcers) and healthy individuals were included in the control group. ¶ The study population is from Poland. Δ The study population is from the United States. ¥ Twenty three individuals were excluded from the initial control group (N = 259) since they had atrophic gastritis and intestinal metaplasia. ¤ This polymorphism was genotyped only in 68 gastric cancer patients and 203 functional dyspepsia controls. ≠ 536 subjects were excluded from the control group since they presented atrophic gastritis.
Figure 2Forest plots of the meta-analysis of TLR2 and TLR4 polymorphisms and risk of gastric cancer.
Forest plots for the meta-analysis of A) TLR2 -196 to -174 del and risk of GC in Japanese, B) TLR4 Asp299Gly and risk of GC, and C) TLR4 Asp299Gly and risk of GC in Western populations. The pooled odds ratios with 95% confidence intervals were calculated using both the fixed and the random effects models (diamonds). The filled squares represent the studies in relation to their weights. OR: odds ratio, LL: lower limit of the 95% confidence intervals, UL: upper limit of the 95% confidence intervals.
Figure 3Forest plots of the meta-analysis of TLR2, TLR4 and CD14 polymorphisms and risk of Helicobacter pylori infection.
Forest plots for the meta-analysis of TLR2 -196 to -174del, TLR4 Asp299Gly, TLR4 rs11536889 and CD14 -260 C/T and risk of H. pylori infection. The pooled odds ratios with 95% confidence intervals were calculated using both the fixed and the random effects models (diamonds). The filled squares represent the studies in relation to their weights. OR: odds ratio, LL: lower limit of the 95% confidence intervals, UL: upper limit of the 95% confidence intervals.