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Literature DB >> 23559386

Single-molecule detection of 5-hydroxymethylcytosine in DNA through chemical modification and nanopore analysis.

Wen-Wu Li¹, Lingzhi Gong, Hagan Bayley.

Abstract

Entities: Chemical

Mesh：

Substances：

Year: 2013 PMID： 23559386 DOI： 10.1002/anie.201300413

Source DB: PubMed Journal: Angew Chem Int Ed Engl ISSN： 1433-7851 Impact factor: 15.336

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17 in total

1. Reversing DNA methylation: mechanisms, genomics, and biological functions.

Authors: Hao Wu; Yi Zhang
Journal: Cell Date: 2014-01-16 Impact factor: 41.582

Review 2. Mechanism and function of oxidative reversal of DNA and RNA methylation.

Authors: Li Shen; Chun-Xiao Song; Chuan He; Yi Zhang
Journal: Annu Rev Biochem Date: 2014 Impact factor: 23.643

3. FIB-Milled Quartz Nanopores in a Sealed Nanopipette.

Authors: Christopher G Gunderson; Samuel T Barlow; Bo Zhang
Journal: J Electroanal Chem (Lausanne) Date: 2018-12-03 Impact factor: 4.464

4. Single-molecule detection of a guanine(C8) - thymine(N3) cross-link using ion channel recording.

Authors: Anna H Wolna; Aaron M Fleming; Cynthia J Burrows
Journal: J Phys Org Chem Date: 2014-04-01 Impact factor: 2.391

5. Simultaneous sequencing of oxidized methylcytosines produced by TET/JBP dioxygenases in Coprinopsis cinerea.

Authors: Lukas Chavez; Yun Huang; Khai Luong; Suneet Agarwal; Lakshminarayan M Iyer; William A Pastor; Virginia K Hench; Sylvia A Frazier-Bowers; Evgenia Korol; Shuo Liu; Mamta Tahiliani; Yinsheng Wang; Tyson A Clark; Jonas Korlach; Patricia J Pukkila; L Aravind; Anjana Rao
Journal: Proc Natl Acad Sci U S A Date: 2014-11-18 Impact factor: 11.205

Single-molecule detection of 5-hydroxymethylcytosine in DNA through chemical modification and nanopore analysis.

1. Reversing DNA methylation: mechanisms, genomics, and biological functions.

Review 2. Mechanism and function of oxidative reversal of DNA and RNA methylation.

3. FIB-Milled Quartz Nanopores in a Sealed Nanopipette.

4. Single-molecule detection of a guanine(C8) - thymine(N3) cross-link using ion channel recording.

5. Simultaneous sequencing of oxidized methylcytosines produced by TET/JBP dioxygenases in Coprinopsis cinerea.

6. Dynamics of a DNA Mismatch Site Held in Confinement Discriminate Epigenetic Modifications of Cytosine.

Review 7. TET family proteins: oxidation activity, interacting molecules, and functions in diseases.

8. Ultrashort single-walled carbon nanotubes in a lipid bilayer as a new nanopore sensor.

9. Programming nanopore ion flow for encoded multiplex microRNA detection.

Review 10. Chemical methods for decoding cytosine modifications in DNA.