Literature DB >> 23557477

The role of arene-arene interactions in the folding of ortho-phenylenes.

Sanyo M Mathew1, James T Engle, Christopher J Ziegler, C Scott Hartley.   

Abstract

The ortho-phenylenes are a simple class of helical oligomers and representative of the broader class of sterically congested polyphenylenes. Recent work has shown that o-phenylenes fold into well-defined helical conformations (in solution and, typically, in the solid state); however, the specific causes of this folding behavior have not been determined. Here, we report the effect of substituents on the conformational distributions of a series of o-phenylene hexamers. These experiments are complemented by dispersion-corrected DFT calculations on model oligomers (B97-D/TZV(2d,2p)). The results are consistent with a deterministic role for offset arene-arene stacking interactions on the folding behavior. On the basis of the experimental and computational results, we propose a model for o-phenylene folding with two simple rules. (1) Conformers are forbidden if they include a particular sequence of biaryl torsional states that causes excessive steric strain. These "ABA" states correspond to consecutive dihedral angles of -55°/+130°/-55° (or +55°/-130°/+55). (2) The stability of the remaining conformers is determined by offset arene-arene stacking interactions that are easily estimated as an additive function of the number of well-folded torsional states (±55°) along the backbone. For the parent, unsubstituted poly(o-phenylene), each interaction contributes roughly 0.5 kcal/mol to the helix stability (in chloroform), although their strength is sensitive to substituent effects. The behavior of the o-phenylenes as a class is discussed in the context of this model. They are analogous to α-helices, with axial aromatic stacking interactions in place of hydrogen bonding. The model predicts that the overall folding propensity should be quite sensitive to relatively small changes in the strength of the arene-arene stacking. In a broader sense, these results demonstrate that polyphenylenes may exhibit folding behavior that is amenable to simple models, and validate the use of diffusion-corrected DFT methods in predicting their three-dimensional structures.

Entities:  

Year:  2013        PMID: 23557477     DOI: 10.1021/ja4026006

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  7 in total

1.  Repetitive two-step method for o,o,p- and o,p-oligophenylene synthesis through Pd-catalyzed cross-coupling of hydroxyterphenylboronic acid.

Authors:  Miyuki Yamaguchi; Takeshi Kimura; Naomi Shinohara; Kei Manabe
Journal:  Molecules       Date:  2013-12-10       Impact factor: 4.411

2.  Twist sense control in terminally functionalized ortho-phenylenes.

Authors:  Gopi Nath Vemuri; Rathiesh R Pandian; Brian J Spinello; Erika B Stopler; Zacharias J Kinney; C Scott Hartley
Journal:  Chem Sci       Date:  2018-09-05       Impact factor: 9.825

3.  Alternating oligo(o,p-phenylenes) via ruthenium catalyzed diol-diene benzannulation: orthogonality to cross-coupling enables de novo nanographene and PAH construction.

Authors:  Zachary A Kasun; Hiroki Sato; Jing Nie; Yasuyuki Mori; Jon A Bender; Sean T Roberts; Michael J Krische
Journal:  Chem Sci       Date:  2018-08-30       Impact factor: 9.825

4.  Macrocycles of higher ortho-phenylenes: assembly and folding.

Authors:  Zacharias J Kinney; Viraj C Kirinda; C Scott Hartley
Journal:  Chem Sci       Date:  2019-08-09       Impact factor: 9.825

5.  Mechanical single-molecule potentiometers with large switching factors from ortho-pentaphenylene foldamers.

Authors:  Jinshi Li; Pingchuan Shen; Shijie Zhen; Chun Tang; Yiling Ye; Dahai Zhou; Wenjing Hong; Zujin Zhao; Ben Zhong Tang
Journal:  Nat Commun       Date:  2021-01-08       Impact factor: 14.919

6.  Sequence-defined oligo(ortho-arylene) foldamers derived from the benzannulation of ortho(arylene ethynylene)s.

Authors:  Dan Lehnherr; Chen Chen; Zahra Pedramrazi; Catherine R DeBlase; Joaquin M Alzola; Ivan Keresztes; Emil B Lobkovsky; Michael F Crommie; William R Dichtel
Journal:  Chem Sci       Date:  2016-07-08       Impact factor: 9.825

7.  Rapid access to substituted 2-naphthyne intermediates via the benzannulation of halogenated silylalkynes.

Authors:  Samuel J Hein; Dan Lehnherr; William R Dichtel
Journal:  Chem Sci       Date:  2017-06-09       Impact factor: 9.825

  7 in total

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