Literature DB >> 23554326

Toward a quantitative understanding of the Wnt/β-catenin pathway through simulation and experiment.

Bethan Lloyd-Lewis1, Alexander G Fletcher, Trevor C Dale, Helen M Byrne.   

Abstract

Wnt signaling regulates cell survival, proliferation, and differentiation throughout development and is aberrantly regulated in cancer. The pathway is activated when Wnt ligands bind to specific receptors on the cell surface, resulting in the stabilization and nuclear accumulation of the transcriptional co-activator β-catenin. Mathematical and computational models have been used to study the spatial and temporal regulation of the Wnt/β-catenin pathway and to investigate the functional impact of mutations in key components. Such models range in complexity, from time-dependent, ordinary differential equations that describe the biochemical interactions between key pathway components within a single cell, to complex, multiscale models that incorporate the role of the Wnt/β-catenin pathway target genes in tissue homeostasis and carcinogenesis. This review aims to summarize recent progress in mathematical modeling of the Wnt pathway and to highlight new biological results that could form the basis for future theoretical investigations designed to increase the utility of theoretical models of Wnt signaling in the biomedical arena.
Copyright © 2013 Wiley Periodicals, Inc.

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Year:  2013        PMID: 23554326     DOI: 10.1002/wsbm.1221

Source DB:  PubMed          Journal:  Wiley Interdiscip Rev Syst Biol Med        ISSN: 1939-005X


  21 in total

1.  Multi-scale modeling of APC and [Formula: see text]-catenin regulation in the human colonic crypt.

Authors:  Brooks Emerick; Gilberto Schleiniger; Bruce M Boman
Journal:  J Math Biol       Date:  2018-01-04       Impact factor: 2.259

2.  Parameter-free methods distinguish Wnt pathway models and guide design of experiments.

Authors:  Adam L MacLean; Zvi Rosen; Helen M Byrne; Heather A Harrington
Journal:  Proc Natl Acad Sci U S A       Date:  2015-02-17       Impact factor: 11.205

3.  Unraveling the Control of Cell Cycle Periods during Intestinal Stem Cell Differentiation.

Authors:  Richard Ballweg; Suengwon Lee; Xiaonan Han; Philip K Maini; Helen Byrne; Christian I Hong; Tongli Zhang
Journal:  Biophys J       Date:  2018-11-03       Impact factor: 4.033

4.  A kinetic model to study the regulation of β-catenin, APC, and Axin in the human colonic crypt.

Authors:  Brooks Emerick; Gilberto Schleiniger; Bruce M Boman
Journal:  J Math Biol       Date:  2017-03-07       Impact factor: 2.259

5.  Life at the mesoscale: the self-organised cytoplasm and nucleoplasm.

Authors:  Richard P Sear; Ignacio Pagonabarraga; Andrew Flaus
Journal:  BMC Biophys       Date:  2015-02-25       Impact factor: 4.778

6.  Analysis of Wnt signalling dynamics during colon crypt development in 3D culture.

Authors:  Chin Wee Tan; Yumiko Hirokawa; Antony W Burgess
Journal:  Sci Rep       Date:  2015-06-18       Impact factor: 4.379

7.  Spatio-temporal model of endogenous ROS and raft-dependent WNT/beta-catenin signaling driving cell fate commitment in human neural progenitor cells.

Authors:  Fiete Haack; Heiko Lemcke; Roland Ewald; Tareck Rharass; Adelinde M Uhrmacher
Journal:  PLoS Comput Biol       Date:  2015-03-20       Impact factor: 4.475

8.  Analysis of Wnt signaling β-catenin spatial dynamics in HEK293T cells.

Authors:  Chin Wee Tan; Bruce S Gardiner; Yumiko Hirokawa; David W Smith; Antony W Burgess
Journal:  BMC Syst Biol       Date:  2014-04-08

9.  Computational modeling of the interplay between cadherin-mediated cell adhesion and Wnt signaling pathway.

Authors:  Jiawen Chen; Zhong-Ru Xie; Yinghao Wu
Journal:  PLoS One       Date:  2014-06-26       Impact factor: 3.240

10.  Odd-skipped related 1 is a novel tumour suppressor gene and a potential prognostic biomarker in gastric cancer.

Authors:  Koji Otani; Yujuan Dong; Xiaoxing Li; Jing Lu; Ning Zhang; Lixia Xu; Minnie Y Y Go; Enders K W Ng; Tetsuo Arakawa; Francis K L Chan; Joseph J Y Sung; Jun Yu
Journal:  J Pathol       Date:  2014-08-28       Impact factor: 7.996

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