Literature DB >> 23550721

Next-generation sequencing: proof of concept for antenatal prediction of the fetal Kell blood group phenotype from cell-free fetal DNA in maternal plasma.

Klaus Rieneck1, Mads Bak, Lars Jønson, Frederik Banch Clausen, Grethe Risum Krog, Niels Tommerup, Leif Kofoed Nielsen, Morten Hedegaard, Morten Hanefeld Dziegiel.   

Abstract

BACKGROUND: Maternal immunization against KEL1 of the Kell blood group system can have serious adverse consequences for the fetus as well as the newborn baby. Therefore, it is important to determine the phenotype of the fetus to predict whether it is at risk. We present data that show the feasibility of predicting the fetal KEL1 phenotype using next-generation sequencing (NGS) technology. STUDY DESIGN AND METHODS: The KEL1/2 single-nucleotide polymorphism was polymerase chain reaction (PCR) amplified with one adjoining base, and the PCR product was sequenced using a genome analyzer (GAIIx, Illumina); several millions of PCR sequences were analyzed.
RESULTS: The results demonstrated the feasibility of diagnosing the fetal KEL1 or KEL2 blood group from cell-free DNA purified from maternal plasma.
CONCLUSION: This method requires only one primer pair, and the large amount of sequence information obtained allows well for statistical analysis of the data. This general approach can be integrated into current laboratory practice and has numerous applications. Besides DNA-based predictions of blood group phenotypes, platelet phenotypes, or sickle cell anemia, and the determination of zygosity, various conditions of chimerism could also be examined using this approach. To our knowledge, this is the first report focused on antenatal blood group determination using NGS.
© 2013 Department of Clinical Immunology, University Hospital Copenhagen. Transfusion © 2013 American Association of Blood Banks.

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Year:  2013        PMID: 23550721     DOI: 10.1111/trf.12172

Source DB:  PubMed          Journal:  Transfusion        ISSN: 0041-1132            Impact factor:   3.157


  15 in total

Review 1.  Noninvasive Antenatal Determination of Fetal Blood Group Using Next-Generation Sequencing.

Authors:  Klaus Rieneck; Frederik Banch Clausen; Morten Hanefeld Dziegiel
Journal:  Cold Spring Harb Perspect Med       Date:  2015-10-28       Impact factor: 6.915

2.  Molecular immunohaematology round table discussions at the AABB Annual Meeting, Anaheim 2015.

Authors:  Willy A Flegel; Lilian Castilho; Wm Andrew L Heaton; Margaret A Keller; Ellen B Klapper; William J Lane; France Pirenne; Nadine Shehata; Gary Stack; Maryse St-Louis; Christopher A Tormey; Franz F Wagner; Dan A Waxman; Gregory A Denomme
Journal:  Blood Transfus       Date:  2016-07-29       Impact factor: 3.443

3.  Molecular immunohaematology round table discussions at the AABB Annual Meeting, Orlando 2016.

Authors:  Willy A Flegel; Qing Chen; Lilian Castilho; Margaret A Keller; Ellen B Klapper; William J Lane; France Pirenne; Gary Stack; Maryse St-Louis; Christopher A Tormey; Dan A Waxman; Christof Weinstock; Silvano Wendel; Gregory A Denomme
Journal:  Blood Transfus       Date:  2018-02-14       Impact factor: 3.443

4.  Automated typing of red blood cell and platelet antigens: a whole-genome sequencing study.

Authors:  William J Lane; Connie M Westhoff; Nicholas S Gleadall; Maria Aguad; Robin Smeland-Wagman; Sunitha Vege; Daimon P Simmons; Helen H Mah; Matthew S Lebo; Klaudia Walter; Nicole Soranzo; Emanuele Di Angelantonio; John Danesh; David J Roberts; Nick A Watkins; Willem H Ouwehand; Adam S Butterworth; Richard M Kaufman; Heidi L Rehm; Leslie E Silberstein; Robert C Green
Journal:  Lancet Haematol       Date:  2018-05-17       Impact factor: 18.959

5.  Introduction of Noninvasive Prenatal Testing for Blood Group and Platelet Antigens from Cell-Free Plasma DNA Using Digital PCR.

Authors:  Marion Eryilmaz; Dennis Müller; Gabi Rink; Harald Klüter; Peter Bugert
Journal:  Transfus Med Hemother       Date:  2019-12-05       Impact factor: 3.747

Review 6.  Laboratory Monitoring of Mother, Fetus, and Newborn in Hemolytic Disease of Fetus and Newborn.

Authors:  Morten Hanefeld Dziegiel; Grethe Risum Krog; Anne Todsen Hansen; Marianne Olsen; Birgitte Lausen; Lone Nikoline Nørgaard; Thomas Bergholt; Klaus Rieneck; Frederik Banch Clausen
Journal:  Transfus Med Hemother       Date:  2021-09-08       Impact factor: 3.747

7.  14 Years of Polish Experience in Non-Invasive Prenatal Blood Group Diagnosis.

Authors:  Agnieszka Orzińska; Katarzyna Guz; Marzena Dębska; Małgorzata Uhrynowska; Zbigniew Celewicz; Mirosław Wielgo; Ewa Brojer
Journal:  Transfus Med Hemother       Date:  2015-11-03       Impact factor: 3.747

Review 8.  Potential of Next-Generation Sequencing in Noninvasive Fetal Molecular Blood Group Genotyping.

Authors:  Sandra Wienzek-Lischka; Sandy Bachmann; Vanessa Froehner; Gregor Bein
Journal:  Transfus Med Hemother       Date:  2020-01-20       Impact factor: 3.747

9.  Cataloguing experimentally confirmed 80.7 kb-long ACKR1 haplotypes from the 1000 Genomes Project database.

Authors:  Kshitij Srivastava; Anne-Sophie Fratzscher; Bo Lan; Willy Albert Flegel
Journal:  BMC Bioinformatics       Date:  2021-05-26       Impact factor: 3.169

10.  Next Generation Sequencing-Based Fetal ABO Blood Group Prediction by Analysis of Cell-Free DNA from Maternal Plasma.

Authors:  Klaus Rieneck; Christoffer Egeberg Hother; Frederik Banch Clausen; Marianne Antonius Jakobsen; Thomas Bergholt; Ellinor Hellmuth; Lene Grønbeck; Morten Hanefeld Dziegiel
Journal:  Transfus Med Hemother       Date:  2020-01-16       Impact factor: 3.747

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