Literature DB >> 23550586

Genome size variation in wild and cultivated maize along altitudinal gradients.

Concepción M Díez1, Brandon S Gaut1, Esteban Meca2, Enrique Scheinvar3, Salvador Montes-Hernandez4, Luis E Eguiarte3, Maud I Tenaillon5.   

Abstract

It is still an open question as to whether genome size (GS) variation is shaped by natural selection. One approach to address this question is a population-level survey that assesses both the variation in GS and the relationship of GS to ecological variants. We assessed GS in Zea mays, a species that includes the cultivated crop, maize, and its closest wild relatives, the teosintes. We measured GS in five plants of each of 22 maize landraces and 21 teosinte populations from Mexico sampled from parallel altitudinal gradients. GS was significantly smaller in landraces than in teosintes, but the largest component of GS variation was among landraces and among populations. In maize, GS correlated negatively with altitude; more generally, the best GS predictors were linked to geography. By contrast, GS variation in teosintes was best explained by temperature and precipitation. Overall, our results further document the size flexibility of the Zea genome, but also point to a drastic shift in patterns of GS variation since domestication. We argue that such patterns may reflect the indirect action of selection on GS, through a multiplicity of phenotypes and life-history traits.
© 2013 The Authors. New Phytologist © 2013 New Phytologist Trust.

Entities:  

Mesh:

Year:  2013        PMID: 23550586      PMCID: PMC4119021          DOI: 10.1111/nph.12247

Source DB:  PubMed          Journal:  New Phytol        ISSN: 0028-646X            Impact factor:   10.151


  29 in total

1.  Evolution of genome size and chromosome number in the carnivorous plant genus Genlisea (Lentibulariaceae), with a new estimate of the minimum genome size in angiosperms.

Authors:  Andreas Fleischmann; Todd P Michael; Fernando Rivadavia; Aretuza Sousa; Wenqin Wang; Eva M Temsch; Johann Greilhuber; Kai F Müller; Günther Heubl
Journal:  Ann Bot       Date:  2014-10-01       Impact factor: 4.357

2.  A phylogenetic analysis of Momordica (Cucurbitaceae) in India based on karyo-morphology, nuclear DNA content and rDNA ITS1-5.8S-ITS2 sequences.

Authors:  Ipshita Ghosh; Partha Sarathi Saha; Biplab Kumar Bhowmick; Sumita Jha
Journal:  Protoplasma       Date:  2020-10-20       Impact factor: 3.356

3.  The extensive amplification of heterochromatin in Melipona bees revealed by high throughput genomic and chromosomal analysis.

Authors:  Jaqueline A Pereira; Diogo Milani; Ana Beatriz S M Ferretti; Vanessa B Bardella; Diogo C Cabral-de-Mello; Denilce M Lopes
Journal:  Chromosoma       Date:  2021-11-26       Impact factor: 4.316

4.  Are chromosome number and genome size associated with habit and environmental niche variables? Insights from the Neotropical orchids.

Authors:  Ana Paula Moraes; Thaissa Brogliato Junqueira Engel; Eliana R Forni-Martins; Fábio de Barros; Leonardo P Felix; Juliano Sarmento Cabral
Journal:  Ann Bot       Date:  2022-07-19       Impact factor: 5.040

5.  Modeling Interactions between Transposable Elements and the Plant Epigenetic Response: A Surprising Reliance on Element Retention.

Authors:  Kyria Roessler; Alexandros Bousios; Esteban Meca; Brandon S Gaut
Journal:  Genome Biol Evol       Date:  2018-03-01       Impact factor: 3.416

6.  Genome size correlates with reproductive fitness in seed beetles.

Authors:  Göran Arnqvist; Ahmed Sayadi; Elina Immonen; Cosima Hotzy; Daniel Rankin; Midori Tuda; Carl E Hjelmen; J Spencer Johnston
Journal:  Proc Biol Sci       Date:  2015-09-22       Impact factor: 5.349

7.  Genome size evolution is associated with climate seasonality and glucosinolates, but not life history, soil nutrients or range size, across a clade of mustards.

Authors:  N Ivalú Cacho; Patrick J McIntyre; Daniel J Kliebenstein; Sharon Y Strauss
Journal:  Ann Bot       Date:  2021-06-24       Impact factor: 4.357

8.  Using carrot centromeric repeats to study karyotype relationships in the genus Daucus (Apiaceae).

Authors:  Dariusz Kadluczka; Ewa Grzebelus
Journal:  BMC Genomics       Date:  2021-07-06       Impact factor: 3.969

9.  Three groups of transposable elements with contrasting copy number dynamics and host responses in the maize (Zea mays ssp. mays) genome.

Authors:  Concepcion M Diez; Esteban Meca; Maud I Tenaillon; Brandon S Gaut
Journal:  PLoS Genet       Date:  2014-04-17       Impact factor: 5.917

10.  The Small Nuclear Genomes of Selaginella Are Associated with a Low Rate of Genome Size Evolution.

Authors:  Anthony E Baniaga; Nils Arrigo; Michael S Barker
Journal:  Genome Biol Evol       Date:  2016-06-03       Impact factor: 3.416

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.