Literature DB >> 23546825

Complete genome sequence of enterovirus 87 isolated from a child with acute flaccid paralysis in China in 2000.

Zexin Tao1, Ning Cui, Aiqiang Xu, Feng Ji, Lizhi Song, Xiaojuan Lin, Ping Xiong, Haiyan Wang, Suting Wang, Peng Chen, Yanyan Song.   

Abstract

Enterovirus 87 (EV87) is a new member of species Human Enterovirus B. So far, only the genome sequence of the prototype strain from Bangladesh is available. Here, we report the genome sequence of EV87 strain LY02/SD/CHN/2000 isolated from an acute flaccid paralysis case in Shandong Province, China, in 2000. It has a genome of 7423 nucleotides. Compared with the prototype strain, it had 80.3% nucleotide and 95.5% amino acid similarity in the VP1 coding region and 82.8% complete genome similarity, reflecting distant genetic relationship between them. Phylogenetic analysis provided evidence of recombination with other serotypes in the P2 and P3 coding regions.

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Year:  2013        PMID： 23546825     DOI： 10.1007/s11262-013-0910-6

Source DB:  PubMed          Journal:  Virus Genes        ISSN： 0920-8569            Impact factor:   2.332


  10 in total

1.  Comparison of classic and molecular approaches for the identification of untypeable enteroviruses.

Authors:  M S Oberste; K Maher; M R Flemister; G Marchetti; D R Kilpatrick; M A Pallansch
Journal:  J Clin Microbiol       Date:  2000-03       Impact factor: 5.948

2.  Picornavirales, a proposed order of positive-sense single-stranded RNA viruses with a pseudo-T = 3 virion architecture.

Authors:  Olivier Le Gall; Peter Christian; Claude M Fauquet; Andrew M Q King; Nick J Knowles; Nobuhiko Nakashima; Glyn Stanway; Alexander E Gorbalenya
Journal:  Arch Virol       Date:  2008-02-22       Impact factor: 2.574

3.  MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0.

Authors:  Koichiro Tamura; Joel Dudley; Masatoshi Nei; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2007-05-07       Impact factor: 16.240

4.  Molecular evolution of the human enteroviruses: correlation of serotype with VP1 sequence and application to picornavirus classification.

Authors:  M S Oberste; K Maher; D R Kilpatrick; M A Pallansch
Journal:  J Virol       Date:  1999-03       Impact factor: 5.103

5.  An automated genotyping tool for enteroviruses and noroviruses.

Authors:  A Kroneman; H Vennema; K Deforche; H v d Avoort; S Peñaranda; M S Oberste; J Vinjé; M Koopmans
Journal:  J Clin Virol       Date:  2011-04-21       Impact factor: 3.168

6.  Enteroviruses 76, 89, 90 and 91 represent a novel group within the species Human enterovirus A.

Authors:  M Steven Oberste; Kaija Maher; Suzanne M Michele; Gaël Belliot; Moyez Uddin; Mark A Pallansch
Journal:  J Gen Virol       Date:  2005-02       Impact factor: 3.891

7.  Cocirculation of two transmission lineages of echovirus 6 in jinan, china, as revealed by environmental surveillance and sequence analysis.

Authors:  Zexin Tao; Haiyan Wang; Yan Li; Aiqiang Xu; Yong Zhang; Lizhi Song; Hiromu Yoshida; Qing Xu; Jing Yang; Yan Zhang; Yao Liu; Lei Feng; Wenbo Xu
Journal:  Appl Environ Microbiol       Date:  2011-04-08       Impact factor: 4.792

8.  Molecular typing and epidemiology of non-polio enteroviruses isolated from Yunnan Province, the People's Republic of China.

Authors:  Tian Bingjun; Hiromu Yoshida; Wu Yan; Lu Lin; Takao Tsuji; Hiroyuki Shimizu; Tatsuo Miyamura
Journal:  J Med Virol       Date:  2008-04       Impact factor: 2.327

9.  Full-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination.

Authors:  K S Lole; R C Bollinger; R S Paranjape; D Gadkari; S S Kulkarni; N G Novak; R Ingersoll; H W Sheppard; S C Ray
Journal:  J Virol       Date:  1999-01       Impact factor: 5.103

10.  Molecular identification of 13 new enterovirus types, EV79-88, EV97, and EV100-101, members of the species Human Enterovirus B.

Authors:  M Steven Oberste; Kaija Maher; William A Nix; Suzanne M Michele; Moyez Uddin; David Schnurr; Suleiman al-Busaidy; Chantal Akoua-Koffi; Mark A Pallansch
Journal:  Virus Res       Date:  2007-05-07       Impact factor: 3.303
  10 in total
  4 in total

1.  Complete genome analysis of human enterovirus B73 isolated from an acute flaccid paralysis patient in Shandong, China.

Authors:  Xiaolin Liu; Zexin Tao; Haiyan Wang; Xiaojuan Lin; Lizhi Song; Yan Li; Li Zhang; Suting Wang; Ning Cui; Aiqiang Xu; Yanyan Song
Journal:  Virus Genes       Date:  2014-05-03       Impact factor: 2.332

2.  Molecular characterization of enteroviruses including a new type EV-C99 isolated from Xinjiang students in Shandong, China in 2011.

Authors:  Zexin Tao; Qun Yuan; Xiaojuan Lin; Suting Wang; Yao Liu; Feng Ji; Ping Xiong; Ning Cui; Lizhi Song; Mei Wang; Aiqiang Xu
Journal:  Sci Rep       Date:  2014-10-09       Impact factor: 4.379

3.  Complete genome characterization of a novel enterovirus type EV-B106 isolated in China, 2012.

Authors:  Jingjing Tang; Zexin Tao; Zhengrong Ding; Yong Zhang; Jie Zhang; Bingjun Tian; Zhixian Zhao; Lifen Zhang; Wenbo Xu
Journal:  Sci Rep       Date:  2014-03-03       Impact factor: 4.379

4.  Isolation and Characterization of a Highly Mutated Chinese Isolate of Enterovirus B84 from a Patient with Acute Flaccid Paralysis.

Authors:  Huanying Zheng; Yong Zhang; Leng Liu; Jing Lu; Xue Guo; Hui Li; Hanri Zeng; Ling Fang; Wenbo Xu; Changwen Ke
Journal:  Sci Rep       Date:  2016-08-08       Impact factor: 4.379
  4 in total

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